Contig 007995:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS015C12Sequence516007995 (3)ref|XP_011072209.1|1e-67PREDICTED: protein HAPLESS 2 [Sesamum indicum]
JMSF018I05Sequence551007995 (3)ref|XP_009630067.1|2e-33PREDICTED: protein HAPLESS 2-like [Nicotiana tomentosiformis]780007087 (3)ref|XP_011072209.1|5e-52PREDICTED: protein HAPLESS 2 [Sesamum indicum]
JMSF039B09Sequence661007995 (3)ref|XP_009782610.1|2e-53PREDICTED: protein HAPLESS 2 isoform X2 [Nicotiana sylvestris]796007087 (3)ref|XP_011072209.1|5e-65PREDICTED: protein HAPLESS 2 [Sesamum indicum]

Alignment

This contig is upended


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JMFS015C12+                                                                     AG
                      ____________________________________________________________
consensus                                                                       AG
 
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JMFS015C12+           CAAAAATCAGGCTGTGAATGGAAGGCATCATAACCAACACCAATTTTGTTACACTCAAGA
                      ____________________________________________________________
consensus             CAAAAATCAGGCTGTGAATGGAAGGCATCATAACCAACACCAATTTTGTTACACTCAAGA
 
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JMFS015C12+           CCATCTAGCGTAAACCTAACTCGTTCAAGCAGCATCCACGTGGAGAAATTGCTGCCTAGA
                      ____________________________________________________________
consensus             CCATCTAGCGTAAACCTAACTCGTTCAAGCAGCATCCACGTGGAGAAATTGCTGCCTAGA
 
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JMFS015C12+           TTTTGTGGTTGACCTGCACCACCCTGTCTAGGGATANCAAGGTAGTAATCCTCAAAAGAT
                      ____________________________________________________________
consensus             TTTTGTGGTTGACCTGCACCACCCTGTCTAGGGATANCAAGGTAGTAATCCTCAAAAGAT
 
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JMFS015C12+           GGAATATCTGTATACCCAACATAGTCTCCAACAAGATTTACTCGTAAAAAATTATCATTG
                      ____________________________________________________________
consensus             GGAATATCTGTATACCCAACATAGTCTCCAACAAGATTTACTCGTAAAAAATTATCATTG
 
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JMFS015C12+           GATGCAGCAGTCCTATTACAGGGACCCACAGTCACTTCCAATCCCTTGAAAACCGAAGAC
                      ____________________________________________________________
consensus             GATGCAGCAGTCCTATTACAGGGACCCACAGTCACTTCCAATCCCTTGAAAACCGAAGAC
 
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JMFS015C12+           AATGAGCAGTGTTGCCTTTCCTTTTGTCATCTGGTAAAAAAAGTTCCCACAGAAAAAAGA
                      ____________________________________________________________
consensus             AATGAGCAGTGTTGCCTTTCCTTTTGTCATCTGGTAAAAAAAGTTCCCACAGAAAAAAGA
 
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JMFS015C12+           AATCTTACGCGGGCCCCCACAAGGGCAACAGATAGGCTGAGTGTGGTCAATAACATTCCC
                      ____________________________________________________________
consensus             AATCTTACGCGGGCCCCCACAAGGGCAACAGATAGGCTGAGTGTGGTCAATAACATTCCC
 
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JMFS015C12+           ATCTTGGTCTTCAACCCTTTCACATATCGGGACAACATCTGAACCGGCATTACGCTTACA
JMSF039B09+                           CTTTCACATATCCGGACAACATCTGAACCGGCATTACGCTTACA
                      ____________________________________________________________
consensus             ATCTTGGTCTTCAACCCTTTCACATATCGGGACAACATCTGAACCGGCATTACGCTTACA
 
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JMFS015C12+           CTTTCTTGTCTTAACATACAACTCTTCTGGTTTG                          
JMSF018I05+                                                       CTCTTATGTATGTCAA
JMSF039B09+           CTTTCTTGTCTTAACATACAACTCTTCTGGTTTGTAAGCAACGTCTCTTATGTATGTCAA
                      ____________________________________________________________
consensus             CTTTCTTGTCTTAACATACAACTCTTCTGGTTTGTAAGCAACGTCTCTTATGTATGTCAA
 
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JMSF018I05+           TTCATACAAAGCATAGGCAGCTGATTTTTGGACAGTAATCACTGGCGGAGACCGAAGGGT
JMSF039B09+           TTCATACAAAGCATAGGCAGCTGATTTTTGGACAGTAATCACTGGCGGAGACCGAAGGGT
                      ____________________________________________________________
consensus             TTCATACAAAGCATAGGCAGCTGATTTTTGGACAGTAATCACTGGCGGAGACCGAAGGGT
 
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JMSF018I05+           TCGCATGTTCGTCGCATCCTCTTCCACTTCTACTATCTCTGCCACCATTGAAGCCTCATT
JMSF039B09+           TCGCATGTTCGTCGCATCCTCTTCCACTTCTACTATCTCTGCCACCATTGAAGCCTCATT
                      ____________________________________________________________
consensus             TCGCATGTTCGTCGCATCCTCTTCCACTTCTACTATCTCTGCCACCATTGAAGCCTCATT
 
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JMSF018I05+           TCCGCTGGATTCACTTGGAACGGCTAAGTCGATGACAATCTTGTTAGTGCAATTGAGTTG
JMSF039B09+           TCCGCTGGATTCACTTGGAACGGCTAAGTCGATGACAATCTTGTTAGTGCAATTGAGTTG
                      ____________________________________________________________
consensus             TCCGCTGGATTCACTTGGAACGGCTAAGTCGATGACAATCTTGTTAGTGCAATTGAGTTG
 
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JMSF018I05+           TTGGTTAGAATCAGAGGCTTTCTCGCA-TTTTGGAGCTTTGATTTAGAGATGATTTGAAT
JMSF039B09+           TTGGTTAGAATCAGAGGCTTTCTCGCATTTTTGGAGCTTTGATTTAGAGATGATTTGAAT
                      ____________________________________________________________
consensus             TTGGTTAGAATCAGAGGCTTTCTCGCATTTTTGGAGCTTTGATTTAGAGATGATTTGAAT
 
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JMSF018I05+           TGAGTAAACAGATTGCATAGAGAGATAGAATGCAAAGAAGATTGTTAGAGCCAGTGGCTT
JMSF039B09+           TGAGTAAACAGATTGCATAGAGAGATAGAATGCAAAGAAGATTGTTAGAGCCAGTGGCTT
                      ____________________________________________________________
consensus             TGAGTAAACAGATTGCATAGAGAGATAGAATGCAAAGAAGATTGTTAGAGCCAGTGGCTT
 
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JMSF018I05+           CATTGTGTAGACAAAGCATCACAGTTTCTTCCCTGGCTGGCTAATGGGCAATGGCTATGC
JMSF039B09+           CATTGTGTAGACAAAGCATCACAGTTTCTTCCCTGGCTGGCTAATGGGCAATGGCTATGC
                      ____________________________________________________________
consensus             CATTGTGTAGACAAAGCATCACAGTTTCTTCCCTGGCTGGCTAATGGGCAATGGCTATGC
 
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JMSF018I05+           TATTGCTGGCCTACGACTTGGAGCTCTGTAATGGAGTCTGAAGACTGGACTACTGGAACA
JMSF039B09+           TATTGCTGGCCTACGACTTGGAGCTCTGTAATGGAGTCTGAAGACTGGACTACTGGAACA
                      ____________________________________________________________
consensus             TATTGCTGGCCTACGACTTGGAGCTCTGTAATGGAGTCTGAAGACTGGACTACTGGAACA
 
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JMSF018I05+           GGAGTGCCGCCTATGGCCGACGTCGCTGCGTCGTCGAGGAATTCCGAAGGGGGTCGGGGG
JMSF039B09+           GGAGTGCCGCCTATGGCCGACGTCGCTGCGTCGTCGAGGAATTCCGAAGGGGGTCGGGGG
                      ____________________________________________________________
consensus             GGAGTGCCGCCTATGGCCGACGTCGCTGCGTCGTCGAGGAATTCCGAAGGGGGTCGGGGG
 
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JMSF018I05+           TCGGGGGTCGGGCGTCGTCGCCTACTCTCTC                             
JMSF039B09+           TCGGGGGTCGGGCGTCGTCGCCTACTCTCTCGTCTCTCTGTAACTGCGTCTGCGATTGTC
                      ____________________________________________________________
consensus             TCGGGGGTCGGGCGTCGTCGCCTACTCTCTCGTCTCTCTGTAACTGCGTCTGCGATTGTC