Contig 007994:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031K21Sequence653007994 (2)655005770 (2)ref|XP_009590203.1|2e-13PREDICTED: GATA transcription factor 21-like, partial [Nicotiana tomentosiformi
JMSF038M24Sequence637007994 (2)ref|XP_011078200.1|6e-04PREDICTED: putative GATA transcription factor 22 [Sesamum indicum]867005770 (2)ref|XP_009604300.1|1e-27PREDICTED: putative GATA transcription factor 22 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF031K21+                  CTTCAATAATCTTCATCATCTCAGTAGTAGCAGTAGTAGTAGTAGCAGCAACA
JMSF038M24+                                  CATCTCAGTAGTAGCAGTAGTAGTAGTAGCAGCAACA
                      ____________________________________________________________
consensus                    CTTCAATAATCTTCATCATCTCAGTAGTAGCAGTAGTAGTAGTAGCAGCAACA
 
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JMSF031K21+           NCCGTAGTAGTAATAGTAGTAGCGGTGCTTGCCATGGTGGCTACCTGGCAAGCGCGATTC
JMSF038M24+           ACCGTAGTAGTAATAGTAGTAGCGGTGCTTGCCATGGTGGCTACCTGGCAAGCGCGATTC
                      ____________________________________________________________
consensus             ACCGTAGTAGTAATAGTAGTAGCGGTGCTTGCCATGGTGGCTACCTGGCAAGCGCGATTC
 
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JMSF031K21+           GATCCCGAGCTCTTCATCTTCTGCATCACCCTCATCTTTGAAGACATCCACTTAACAGGA
JMSF038M24+           GATCCCGAGCTCTTCATCTTCTGCATCACCCTCATCTTTGAAGACATCCACTTAACAGGA
                      ____________________________________________________________
consensus             GATCCCGAGCTCTTCATCTTCTGCATCACCCTCATCTTTGAAGACATCCACTTAACAGGA
 
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JMSF031K21+           ATTATTCCCTCATCATGAGTATGATGATCATTACTGTCTTCACAATTAGTACTCCTCCAT
JMSF038M24+           ATTATTCCCTCATCATGAGTATGATGATCATTACTGTCTTCACAATTAGTACTCCTCCAT
                      ____________________________________________________________
consensus             ATTATTCCCTCATCATGAGTATGATGATCATTACTGTCTTCACAATTAGTACTCCTCCAT
 
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JMSF031K21+           AAACTTGCCTTTGTTTTAGGCCCTTGATCATATGATCCACCATTTGCAGCATGATTATTA
JMSF038M24+           AAACTTGCCTTTGTTTTAGGCCCTTGATCATATGATCCACCATTTGCAGCATGATTATTA
                      ____________________________________________________________
consensus             AAACTTGCCTTTGTTTTAGGCCCTTGATCATATGATCCACCATTTGCAGCATGATTATTA
 
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JMSF031K21+           TCAACCTTGGGGTGTCGTGGATAGAAGAATTGAGGATCAGAATCATAGTAGAGCTGAGGT
JMSF038M24+           TCAACCTTGGGGTGTTGTGGATAGAAGAATTGAGGATCAGAATCATAGTAGAGCTGAGGT
                      ____________________________________________________________
consensus             TCAACCTTGGGGTGTTGTGGATAGAAGAATTGAGGATCAGAATCATAGTAGAGCTGAGGT
 
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JMSF031K21+           TGATTATCCCAGGATGATCTTGAGTTTAAGAAAAGATGAGATGGTTGGGAGTGAGCAGAG
JMSF038M24+           TGATTATCCCAGGATGATCTTGAGTTTAAGAAAAGATGAGATGGTTGGGAGTGAGCAGAG
                      ____________________________________________________________
consensus             TGATTATCCCAGGATGATCTTGAGTTTAAGAAAAGATGAGATGGTTGGGAGTGAGCAGAG
 
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JMSF031K21+           GATGATGAAGAGACATTATGGTAGTTTGGAGTAGTAAAATTAAGGTTATGGTTTTGATGA
JMSF038M24+           GATGATGAAGAGACATTATGGTAGTTTGGAGTAGTAAAATTAAGGTTATGGTTTTGATGA
                      ____________________________________________________________
consensus             GATGATGAAGAGACATTATGGTAGTTTGGAGTAGTAAAATTAAGGTTATGGTTTTGATGA
 
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JMSF031K21+           TGATGATGATCATGATCTTCATTACTCAGCTCAAAAGGGAAAGGAGAAGATGAAGAATTT
JMSF038M24+           TGATGATGATCATGATCTTCATTACTCAGCTCAAAAGGGAAAGGAGAAGATGAAGAATTT
                      ____________________________________________________________
consensus             TGATGATGATCATGATCTTCATTACTCAGCTCAAAAGGGAAAGGAGAAGATGAAGAATTT
 
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JMSF031K21+           GCACTATAAGGTGGAGTCATGGCCGGGAAGATCAGATCAGATATGATGATGTAGAGGAAT
JMSF038M24+           GCACTATAAGGTGGAGTCATGGCCGGGAAGATCAGATCAGATATGATGATGTAGAGGAAT
                      ____________________________________________________________
consensus             GCACTATAAGGTGGAGTCATGGCCGGGAAGATCAGATCAGATATGATGATGTAGAGGAAT
 
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JMSF031K21+           TGATCTGAATTTAACAACAAAAAATGCAACAAATTCTCTCTCTCTCTCTCTTTCTTCG  
JMSF038M24+           TGATCTGAATTTAACAACAAAAAATGCAACAAATTCTCTCTCTCTCTCTCTTTCTTCGTC
                      ____________________________________________________________
consensus             TGATCTGAATTTAACAACAAAAAATGCAACAAATTCTCTCTCTCTCTCTCTTTCTTCGTC