Contig 007993:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025P09Sequence657007993 (2)ref|XP_010323594.1|8e-63PREDICTED: alcohol dehydrogenase-like isoform X1 [Solanum lycopersicum]697017157ref|XP_010323594.1|2e-44PREDICTED: alcohol dehydrogenase-like isoform X1 [Solanum lycopersicum]
JMSF038M03Sequence635007993 (2)ref|XP_008231478.1|4e-19PREDICTED: cinnamoyl-CoA reductase 1-like [Prunus mume]758001231 (10)ref|XP_009611351.1|1e-66PREDICTED: cinnamoyl-CoA reductase 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF025P09+                                                                 CTCCAC
                      ____________________________________________________________
consensus                                                                   CTCCAC
 
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JMSF025P09+           GTGAGTGAGAAGAAGCTCACGAATTAGAAGTCGAGGAAGTGTTTTTCTTTTAAACTTTCA
                      ____________________________________________________________
consensus             GTGAGTGAGAAGAAGCTCACGAATTAGAAGTCGAGGAAGTGTTTTTCTTTTAAACTTTCA
 
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JMSF025P09+           ATAGTATCCTTAAGGCTCACATCAAAAGAAGTGTAGTTGATCCCCAAGCTTTTTGCCTTT
                      ____________________________________________________________
consensus             ATAGTATCCTTAAGGCTCACATCAAAAGAAGTGTAGTTGATCCCCAAGCTTTTTGCCTTT
 
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JMSF025P09+           TCCTGACATACTTGATAGGTTGCTACTGTAGGCAAGTCATCTTTATATTTGTCAGAAATG
                      ____________________________________________________________
consensus             TCCTGACATACTTGATAGGTTGCTACTGTAGGCAAGTCATCTTTATATTTGTCAGAAATG
 
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JMSF025P09+           GAAAGAGAAGGGAAAAGCCCACTTGCAATCTTCTTTTACGAGATCTAAAATGACTCCACT
                      ____________________________________________________________
consensus             GAAAGAGAAGGGAAAAGCCCACTTGCAATCTTCTTTTACGAGATCTAAAATGACTCCACT
 
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JMSF025P09+           TGAAAAATTAAGAGTGGGTTGGAGAAGAGGGCCAATAACCAGAGCAGGATGTAAAGAAAC
                      ____________________________________________________________
consensus             TGAAAAATTAAGAGTGGGTTGGAGAAGAGGGCCAATAACCAGAGCAGGATGTAAAGAAAC
 
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JMSF025P09+           CAAGTCAATCCGGTTCTCCACTGCATACTTCCATCCAGCTTCCTCTGCAAGGACTTTAGA
                      ____________________________________________________________
consensus             CAAGTCAATCCGGTTCTCCACTGCATACTTCCATCCAGCTTCCTCTGCAAGGACTTTAGA
 
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JMSF025P09+           CAAGAAATACCATTGCTTTGCTTCTTCTGCAAATTCTTTATCTGTATACCAAGTCTCATC
JMSF038M03+                                    TCTGCAAATTCTTTATCAGAAAACCAAGTGTCATC
                      ____________________________________________________________
consensus             CAAGAAATACCATTGCTTTGCTTCTTCTGCAAATTCTTTATCTGTATACCAAGTGTCATC
 
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JMSF025P09+           AACTACATCAGTTGGACTAATAGGATTTCGTTTGCACATAATAGAAGCCATTGAAGACGT
JMSF038M03+           GATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAATGGTTGCCGTTGAGGACGT
                      ____________________________________________________________
consensus             GATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAATGGTTGCCGTTGAGGACGT
 
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JMSF025P09+           CACCACTACCTTTTTCACAGAAGGTATTCTTACACATGATTCAAGAACATTTAGTGTCCC
JMSF038M03+           CAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTCAAGAACGTTTAGTGTCCC
                      ____________________________________________________________
consensus             CAGCACTATTTTTTTCACAGAAGGTGTTCTTACACATGATTCAAGAACGTTTAGTGTCCC
 
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JMSF025P09+           CTTTACTGCAGGATCCACTAGTTCTGCCT                               
JMSF038M03+           ATTTACTGCAGGACTCACTAGCTCTGCCTAAAATATATATAGGGACAAACATCATAAAAG
                      ____________________________________________________________
consensus             CTTTACTGCAGGATTCACTAGTTCTGCCTAAAATATATATAGGGACAAACATCATAAAAG
 
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JMSF038M03+           AGAAAGAAGATAGATAAATATAGAACAAGTGGGGAAAATGGGTGATCGTGAAAGAGGTGA
                      ____________________________________________________________
consensus             AGAAAGAAGATAGATAAATATAGAACAAGTGGGGAAAATGGGTGATCGTGAAAGAGGTGA
 
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JMSF038M03+           TTATGAGGTGATTATGATTGGTAAAAAGAAAATCGCTGGTTAATTCAACAAAGATTAAAC
                      ____________________________________________________________
consensus             TTATGAGGTGATTATGATTGGTAAAAAGAAAATCGCTGGTTAATTCAACAAAGATTAAAC
 
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JMSF038M03+           ATAAGAAAAGGAAAAGGTTAACCTTAGTTGCAGATGGTGAAAAAGAAACAGGTGATGCTG
                      ____________________________________________________________
consensus             ATAAGAAAAGGAAAAGGTTAACCTTAGTTGCAGATGGTGAAAAAGAAACAGGTGATGCTG
 
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JMSF038M03+           TGTGGAAAACACCTTCACACCCATTAATTGCAGAATCAAAAGAGTTTTCCTCAACTAAGT
                      ____________________________________________________________
consensus             TGTGGAAAACACCTTCACACCCATTAATTGCAGAATCAAAAGAGTTTTCCTCAACTAAGT
 
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JMSF038M03+           CAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATCTAATGCAAGAAGATGTGACACCT
                      ____________________________________________________________
consensus             CAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATCTAATGCAAGAAGATGTGACACCT
 
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JMSF038M03+           TATTTGGATCCTCTGCAATAATACCATATAAGATGTACTGTAATGGAAGGTACAGCAATA
                      ____________________________________________________________
consensus             TATTTGGATCCTCTGCAATAATACCATATAAGATGTACTGTAATGGAAGGTACAGCAATA
 
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JMSF038M03+           CATATATACATCAATGATTTTCCAGAAATAAAATTGAATTGGAAGAGAGAGGGAACTGAT
                      ____________________________________________________________
consensus             CATATATACATCAATGATTTTCCAGAAATAAAATTGAATTGGAAGAGAGAGGGAACTGAT