Contig 007985:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS169B05Sequence603007985 (2)ref|XP_009783501.1|5e-38PREDICTED: squamosa promoter-binding-like protein 7 [Nicotiana sylvestris]
JMSF037H09Sequence624007985 (2)ref|XP_009783501.1|2e-28PREDICTED: squamosa promoter-binding-like protein 7 [Nicotiana sylvestris]719017223ref|XP_009610112.1|7e-14PREDICTED: squamosa promoter-binding-like protein 7 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS169B05+              GAGGCAAACCCGGTGTCTCCGATGATAACCTTTGAGCTCACTGATATCAGTTTCACA
JMSF037H09+                                               GAGCTCACTGATATCAGTTTCACA
                      ____________________________________________________________
consensus                GAGGCAAACCCGGTGTCTCCGATGATAACCTTTGAGCTCACTGATATCAGTTTCACA
 
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JMFS169B05+           GCCAGGCACTTGACACCGGGCAATGGACTGCCCGGCAGCAGAAGCTTTGGCCGTACGGGG
JMSF037H09+           GCCAGGCACTTGACACCGGGCAATGGACTGCCCGGCAGCAGAAGCTTTGTCCGTACGGGG
                      ____________________________________________________________
consensus             GCCAGGCACTTGACACCGGGCAATGGACTGCCCGGCAGCAGAAGCTTTGTCCGTACGGGG
 
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JMFS169B05+           CTTCTTCTTCCCGGTAGACCCCAGAGCCGCTAGCTCCTCCTCCTCCAGCTGCTCATCTAA
JMSF037H09+           CTTCTTCTTCCCGGTAGACCCCAGAGCCGCTAGCTCCTCCTCCTCCAGCTGCTCATCTAA
                      ____________________________________________________________
consensus             CTTCTTCTTCCCGGTAGACCCCAGAGCCGCTAGCTCCTCCTCCTCCAGCTGCTCATCTAA
 
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JMFS169B05+           CTCCGGGCAGGCACAAGGGATCCTGCCGGCCAGAAAGTTAGAGCACACCATCCTCGGGTC
JMSF037H09+           CTCCGGGCAGGCACAAGGGATCCTGCCGGCCAGAAAGTTAGAGCACACCATCCTCGGGTC
                      ____________________________________________________________
consensus             CTCCGGGCAGGCACAAGGGATCCTGCCGGCCAGAAAGTTAGAGCACACCATCCTCGGGTC
 
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JMFS169B05+           TCTCTTCCTCACCCGACCCGGATCAGCAGCCGTAATCGGCGGTTGGGGAGAGGGGATATC
JMSF037H09+           TCTCTTCCTCACCCGACCCGGATCAGCAGCCGTAATCGGCGGTTGGGGAGAGGGGATATC
                      ____________________________________________________________
consensus             TCTCTTCCTCACCCGACCCGGATCAGCAGCCGTAATCGGCGGTTGGGGAGAGGGGATATC
 
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JMFS169B05+           CGGCTGCTGGGGTTGCTGGTCGGAGGAATCGAATGAGATGTTTAGATGGTCGTCGAGGCT
JMSF037H09+           CGGCTGCTGGGGTTGCTGGTCGGAGGAATCGAATGAGATGTTTAGATGGTCGTCGAGGCT
                      ____________________________________________________________
consensus             CGGCTGCTGGGGTTGCTGGTCGGAGGAATCGAATGAGATGTTTAGATGGTCGTCGAGGCT
 
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JMFS169B05+           GAACTCCAGGAATTCAGACCAATCAAAGAGCGAGGAAGTGGCGACGGGGTCATCGGGCAA
JMSF037H09+           GAACTCCAGGAATTCAGACCAATCAAAGAGCGAGGAAGTGGCGACGGGGTCATCGGGCAA
                      ____________________________________________________________
consensus             GAACTCCAGGAATTCAGACCAATCAAAGAGCGAGGAAGTGGCGACGGGGTCATCGGGCAA
 
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JMFS169B05+           TTGGGTAATTGCGGAGGTCATTTGGGCATTTTTCGATTGGGGTGGGGATTCAATGGGTGG
JMSF037H09+           TTGGGTAATTGCGGAGGTCATTTGGGCATTTTTCGATTGGGGTGGGGATTCAATGGGTGG
                      ____________________________________________________________
consensus             TTGGGTAATTGCGGAGGTCATTTGGGCATTTTTCGATTGGGGTGGGGATTCAATGGGTGG
 
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JMFS169B05+           CGCCGCCGCTGTCGGGTTCTCCATTAGCCGCGAACTATATAAGGACGAAACCCTGAAAAT
JMSF037H09+           CGCCGCCGCTGTCGGGTTCTCCATTAGCCGCGAACTATATAAGGACGAAACCCTGAAAAT
                      ____________________________________________________________
consensus             CGCCGCCGCTGTCGGGTTCTCCATTAGCCGCGAACTATATAAGGACGAAACCCTGAAAAT
 
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JMFS169B05+           CTGGTTGAGAGAGAACACAGAGTGAAAGGATTTGCGGAGAAGCGAAGTGGGTTTAGAGAG
JMSF037H09+           CTGGTTGAGAGAGAACACAGGGTGAAAGGATTTGCGGAGAAGCGAAGTGGGTTTAGAGAG
                      ____________________________________________________________
consensus             CTGGTTGAGAGAGAACACAGGGTGAAAGGATTTGCGGAGAAGCGAAGTGGGTTTAGAGAG
 
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JMFS169B05+           AGAGAG                                                      
JMSF037H09+           AGAGAGAAAAAGAGGCGCGGCGGAGAGCAGAGGGTGAAATGTTAGAGTCAGCGGTGGTTC
                      ____________________________________________________________
consensus             AGAGAGAAAAAGAGGCGCGGCGGAGAGCAGAGGGTGAAATGTTAGAGTCAGCGGTGGTTC