Contig 007984:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF038I11-                                                      AGCTGGGTGCAGGAGT
                      ____________________________________________________________
consensus                                                         AGCTGGGTGCAGGAGT
 
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rJMFF038I11-          TGTTTGGACATTGTCCATCTATGAAGAACCTGGCCATCAACATCATAGAACACAATCCCA
                      ____________________________________________________________
consensus             TGTTTGGACATTGTCCATCTATGAAGAACCTGGCCATCAACATCATAGAACACAATCCCA
 
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rJMFF038I11-          ATATCATTCTCAACCAACTGCACAGACATGAATCCTTGCCCATCATAGAAGAATGACACC
                      ____________________________________________________________
consensus             ATATCATTCTCAACCAACTGCACAGACATGAATCCTTGCCCATCATAGAAGAATGACACC
 
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rJMSF037G22-                                                        CCCCGNTCGTCNTA
rJMFF038I11-          CCTTTCCTGTTCATTGTAACATCTCCCCTCCACGCCTTCGACCCCGCCCCGCTCGTCATA
                      ____________________________________________________________
consensus             CCTTTCCTGTTCATTGTAACATCTCCCCTCCACGCCTTCGACCCCGCCCCGCTCGTCATA
 
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rJMSF037G22-          NATTGAATCGGGCTTTCGTCGTCAGCGATGTGTTCAAGGCAATGGTCGTGGCCGTTCATG
rJMFF038I11-          AATTGAATCGGGCTTTCGTCGTCAGCGATGTGTTCAAGGCAATGGTCGTGGCCGTTCATG
                      ____________________________________________________________
consensus             AATTGAATCGGGCTTTCGTCGTCAGCGATGTGTTCAAGGCAATGGTCGTGGCCGTTCATG
 
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rJMSF037G22-          TACAGATCCACGTTGTAGGTCCGGAGAATGGGAAGAAGGCGTTCGACGAGGTCTTTGCTG
rJMFF038I11-          TACAGATCCACGTTGTAGGTCCGGAGAATGGGAAGAAGGCGTTCGACGAGGTCTTTGCTG
                      ____________________________________________________________
consensus             TACAGATCCACGTTGTAGGTCCGGAGAATGGGAAGAAGGCGTTCGACGAGGTCTTTGCTG
 
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rJMSF037G22-          TCGCCGTGGTGCCCGGCGCTCCTAATCGCATGATGCCCGACGACTATCCTCCATTTCGCG
rJMFF038I11-          TCGCCGTGGTGCCCGGCGCTCCTAATCGCATGATGCCCGACGACTATCCTCCATTTCGCG
                      ____________________________________________________________
consensus             TCGCCGTGGTGCCCGGCGCTCCTAATCGCATGATGCCCGACGACTATCCTCCATTTCGCG
 
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rJMSF037G22-          GTGGATTTCATCAATGCATATTCAAGATCTTTTAGCACATTTTTGGTGTATATCTGCCGA
rJMFF038I11-          GTGGATTTCATCAATGCATATTCAAGATCTTTTAGCACATTTTTGGTGTATATCTGCCGA
                      ____________________________________________________________
consensus             GTGGATTTCATCAATGCATATTCAAGATCTTTTAGCACATTTTTGGTGTATATCTGCCGA
 
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rJMSF037G22-          GGGGCAACGCCACGCCAATCGTATTCATGCTCGGGCGAAGTGAAGTAATCCTCCACAAAT
rJMFF038I11-          GGGGCAACGCCACGCCAATCGTATTCATGCTCGGGCGAAGTGAAGTAATCCTCCACAAAT
                      ____________________________________________________________
consensus             GGGGCAACGCCACGCCAATCGTATTCATGCTCGGGCGAAGTGAAGTAATCCTCCACAAAT
 
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rJMSF037G22-          GGTGTCGTGTCCACAAAGAACAAATCAACAATTTCTGTGTTGACAACAAAAGACCTTAAA
rJMFF038I11-          GGTGTCGTGTCCACAAAGAACAAATCAACAATTTCTGTGTTGACAACAAAAGACCTTAAA
                      ____________________________________________________________
consensus             GGTGTCGTGTCCACAAAGAACAAATCAACAATTTCTGTGTTGACAACAAAAGACCTTAAA
 
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rJMSF037G22-          CAAAGCCATCTGCTATCAAGTTTTCTGAGGTGAGAGCTAAGTTGTGCCTCAACATCTCCT
rJMFF038I11-          CAAAGCCATCTGCTATCAAGTTTTCTGAGGTGAGAGCTAAGTTGTGCCTCAACATCTCCT
JMSF037G22+                                                                      T
                      ____________________________________________________________
consensus             CAAAGCCATCTGCTATCAAGTTTTCTGAGGTGAGAGCTAAGTTGTGCCTCAACATCTCCT
 
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rJMSF037G22-          CTGTAATCATGGTTGCCCAAAACGGAATACCATTGTTTCTGCAAGCTTTCTGCTGTATAA
rJMFF038I11-          CTGTAATCATGGTTGCCCAAAACGGAATACCATTGTTTCTGCAAGCTTTCTGCTGTATAA
JMFF038I11+                                      TACCATTGTTTCTGCAAGCTTTCTGCTGTATAA
JMSF037G22+           CTGTAATCATGGTTGCCCAAAACGGAATACCATTGTTTCTGCAAGCTTTCTGCTGTATAA
                      ____________________________________________________________
consensus             CTGTAATCATGGTTGCCCAAAACGGAATACCATTGTTTCTGCAAGCTTTCTGCTGTATAA
 
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rJMSF037G22-          ACGTCGGTGAAAGATTCCGTGAAAGCCGGGTCGTGTTCCCCTGTCA              
rJMFF038I11-          ACGTCGGTGAAAGATTCCGTGAAAGCCGGGTCGTGTTCCCCTGTCA              
JMFF038I11+           ACGTCGGTGAAAGATTCCGTGAAAGCCGGGTCGTGTTCCCCTGTCAACCCACTATCATAA
JMSF037G22+           ACGTCGGTGAAAGATTCCGTGAAAGCCGGGTCGTGTTCCCCTGTCAACCCACTATCATAA
                      ____________________________________________________________
consensus             ACGTCGGTGAAAGATTCCGTGAAAGCCGGGTCGTGTTCCCCTGTCAACCCACTATCATAA
 
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JMFF038I11+           AAGTTGTCACCCGTTGATACAACGAAATCAATGGCCAATCTCTCTCCAATTTTCCCCATC
JMSF037G22+           AAGTTGTCACCCGTTGATACAACGAAATCAATGGCCAATCTCTCTCCAATTTTTCCCATC
                      ____________________________________________________________
consensus             AAGTTGTCACCCGTTGATACAACGAAATCAATGGCCAATCTCTCTCCAATTTTTCCCATC
 
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JMFF038I11+           TGAAAGGCAACCTGGGATTGGTTATAATCGCCCTTTCTTCCCCAATCTCCGACGACCAAG
JMSF037G22+           TGAAAGGCAACCTGGGATTGGTTATAATCGCCCTTTCTTCCCCAATCTCCGACGACCAAG
                      ____________________________________________________________
consensus             TGAAAGGCAACCTGGGATTGGTTATAATCGCCCTTTCTTCCCCAATCTCCGACGACCAAG
 
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JMFF038I11+           AAACTAAGGCTGCCATCGCCCTTGGTGGGGTGATGAAACACCGGAAGCTCAGCAATGGCG
JMSF037G22+           AAACTAAGGCTGCCATCGCCCTTGGTGGGGTGATGAAACACCGGAAGCTCAGCAATGGCG
                      ____________________________________________________________
consensus             AAACTAAGGCTGCCATCGCCCTTGGTGGGGTGATGAAACACCGGAAGCTCAGCAATGGCG
 
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JMFF038I11+           GACGCAAAACAAAGCCCAAAAACAACGCCCACCCACAGGCACAGAACCATGGAAATCCCC
JMSF037G22+           GACGCAAAACAAAGCCCAAAAACAACGCCCACCCACAGGCACAGAACCATGGAAATCCCC
                      ____________________________________________________________
consensus             GACGCAAAACAAAGCCCAAAAACAACGCCCACCCACAGGCACAGAACCATGGAAATCCCC
 
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JMFF038I11+           GAATACCGGCCCGCCATGGCTCTGTGAAAACAAGGAATCTTAAGGGAAAAAAAGAAAAGA
JMSF037G22+           GAATACCGGCCCGCCATGGCTCTGTGAAAACAAGGAATCTTAAGGGAAAAAAAGAAAAGA
                      ____________________________________________________________
consensus             GAATACCGGCCCGCCATGGCTCTGTGAAAACAAGGAATCTTAAGGGAAAAAAAGAAAAGA
 
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JMFF038I11+           AAAGAAAAAGAAAAGATTCAACAAATGTGAATGAATCTTCACAAACTACCCTCTCTGATC
JMSF037G22+           AAAGAAAAAGAAAAGATTCAACAAATGTGAATGAATCTTCACAAACTACCCTCTCTGATC
                      ____________________________________________________________
consensus             AAAGAAAAAGAAAAGATTCAACAAATGTGAATGAATCTTCACAAACTACCCTCTCTGATC
 
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JMFF038I11+           GATGAAAAACAGAATATGAAAGCGGATGAATTAGAGC                       
JMSF037G22+           GATGAAAAACAGAATATGAAAGCGGATGAATTTGAGCAAGAACTCTTCAATCTGTGTATA
                      ____________________________________________________________
consensus             GATGAAAAACAGAATATGAAAGCGGATGAATTTGAGCAAGAACTCTTCAATCTGTGTATA
 
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JMSF037G22+           TATTATAGGTCGGGAAAAAGCTGAATCTTTTTGGTTGGTTAAGGTCGGACGGTAATGAAT
                      ____________________________________________________________
consensus             TATTATAGGTCGGGAAAAAGCTGAATCTTTTTGGTTGGTTAAGGTCGGACGGTAATGAAT
 
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JMSF037G22+           TCAACGGGCAAGAATGTAGGATGTCTGGTTTGGATTAGTGGGGATTAATGATCAATAGCC
                      ____________________________________________________________
consensus             TCAACGGGCAAGAATGTAGGATGTCTGGTTTGGATTAGTGGGGATTAATGATCAATAGCC