| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF035H16 | Sequence | 554 | 007981 (2) | ref|NP_001275038.1| | 1e-13 | glucose-6-phosphate 1-dehydrogenase, chloroplastic [Solanum tuberosum] sp|Q43839 | 694 | 009739 (2) | gb|AFF18791.1| | 1e-59 | glucose-6-phosphate 1-dehydrogenase, partial [Dimocarpus longan] |
| JMSF036L01 | Sequence | 645 | 007981 (2) | ref|XP_009593751.1| | 3e-55 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic [Nicotiana toment | 740 | 009739 (2) | ref|XP_009782232.1| | 7e-88 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic [Nicotiana sylves |
This contig is upended
. : . : . : . : . : . :
JMSF036L01+ ATTCTGCAAGTTAAAGTTGTACTGATCATGTGCCGTAGTTCCTCA
____________________________________________________________
consensus ATTCTGCAAGTTAAAGTTGTACTGATCATGTGCCGTAGTTCCTCA
. : . : . : . : . : . :
JMSF036L01+ TCATTCATTTTAGTCCGAGCATAACCAAAGACGACAAAATTCTCTGGAAGACAATCTTCA
____________________________________________________________
consensus TCATTCATTTTAGTCCGAGCATAACCAAAGACGACAAAATTCTCTGGAAGACAATCTTCA
. : . : . : . : . : . :
JMSF036L01+ TAAAAAAGTGCAAACAAAGCTGGAAAGATTTTCTTCTTCGCAAGGTCCCCGGAAGCTCCA
____________________________________________________________
consensus TAAAAAAGTGCAAACAAAGCTGGAAAGATTTTCTTCTTCGCAAGGTCCCCGGAAGCTCCA
. : . : . : . : . : . :
JMSF036L01+ ACAACAGTTATGCTGAGCATGGACTCTGCTTTTGCTAACTCAAATAAAGGAAATTCTTCT
____________________________________________________________
consensus ACAACAGTTATGCTGAGCATGGACTCTGCTTTTGCTAACTCAAATAAAGGAAATTCTTCT
. : . : . : . : . : . :
JMFF035H16+ CCATCTTGCAGAGACACGGAAACGGCATTGAGAGGGTAGCCA
JMSF036L01+ GGCAACATTGCAGCTGAGCCATCTTGCAGAGACACGGAAACGGCATTGAGAGGGTAGCCA
____________________________________________________________
consensus GGCAACATTGCAGCTGAGCCATCTTGCAGAGACACGGAAACGGCATTGAGAGGGTAGCCA
. : . : . : . : . : . :
JMFF035H16+ TTGGAGGACATGAGCTCAAAATGCTTCCTTGGTTGGATTTGACCACAAATTCCCGAGACC
JMSF036L01+ TTGGAGGACATGAGCTCAAAATGCTTCCTTGGTTGGATTTGACCACAAATTCCCGAGACC
____________________________________________________________
consensus TTGGAGGACATGAGCTCAAAATGCTTCCTTGGTTGGATTTGACCACAAATTCCCGAGACC
. : . : . : . : . : . :
JMFF035H16+ CAATTCAAGGAATGGATTCTGCGCGGCAAAACAGCGAACTTTTTCGAATAACAAAACGTC
JMSF036L01+ CAATTCAAGGAATGGATTCTGCGCGGCAAAACAGCGAACTTTTTCGAATAACAAAACGTC
____________________________________________________________
consensus CAATTCAAGGAATGGATTCTGCGCGGCAAAACAGCGAACTTTTTCGAATAACAAAACGTC
. : . : . : . : . : . :
JMFF035H16+ TCGCGGTGGAATGCGGAGGAAGAACAAGGGCTAAATTGCAACAGCCTAGCCATGCAGTTG
JMSF036L01+ TCGCGGTGGAATGCGGAGGAAGAACAAGGGCTAAATTGCAACAGCCTAGCCATGCAGTTG
____________________________________________________________
consensus TCGCGGTGGAATGCGGAGGAAGAACAAGGGCTAAATTGCAACAGCCTAGCCATGCAGTTG
. : . : . : . : . : . :
JMFF035H16+ TTCATCCAGAAACAAGCTCCGCGCGAAGCTATTTGGGTTTTAACAGAAGAATTAACGTGA
JMSF036L01+ TTCATCCAGAAACAAGCTCCGCGCGAAGCTATTTGGGTTTTAACAGAAGAATTAACGTGA
____________________________________________________________
consensus TTCATCCAGAAACAAGCTCCGCGCGAAGCTATTTGGGTTTTAACAGAAGAATTAACGTGA
. : . : . : . : . : . :
JMFF035H16+ AAAACAAGTGTTAATGTGAAATGGTTATGGATTTTATAATGTATTGGAATTGGATACATA
JMSF036L01+ AAAACAAGTGTTAATGTGAAATGGTTATGGATTTTATAATGTATTGGAATTGGATACATA
____________________________________________________________
consensus AAAACAAGTGTTAATGTGAAATGGTTATGGATTTTATAATGTATTGGAATTGGATACATA
. : . : . : . : . : . :
JMFF035H16+ GAACATGAAAGAATAGCGATTAAGATTTGGTGATGAGCTAAGAAGTGTTAGAGGAAAGT
JMSF036L01+ GAACATGAAAGAATAGCGATTAAGATTTGGTGATGAGCTAAGAAGTGTTAGAGGAAAGTC
____________________________________________________________
consensus GAACATGAAAGAATAGCGATTAAGATTTGGTGATGAGCTAAGAAGTGTTAGAGGAAAGTC