| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016B22 | Sequence | 494 | 007974 (5) | ref|XP_009795453.1| | 3e-13 | PREDICTED: uncharacterized protein At2g27730, mitochondrial-like isoform X1 [Ni | 465 | 007974 (5) | ref|XP_009795453.1| | 2e-13 | PREDICTED: uncharacterized protein At2g27730, mitochondrial-like isoform X1 [Ni |
| JMFN003H03 | Sequence | 474 | 007974 (5) | ref|XP_009795453.1| | 2e-13 | PREDICTED: uncharacterized protein At2g27730, mitochondrial-like isoform X1 [Ni | |||||
| JMFN004J07 | Sequence | 580 | 007974 (5) | ref|XP_009795453.1| | 7e-13 | PREDICTED: uncharacterized protein At2g27730, mitochondrial-like isoform X1 [Ni | |||||
| JMSF035H03 | Sequence | 572 | 007974 (5) | ref|XP_009795453.1| | 3e-13 | PREDICTED: uncharacterized protein At2g27730, mitochondrial-like isoform X1 [Ni | |||||
This contig is upended
. : . : . : . : . : . :
JMFN004J07+ ACATTTTAATTCGAAAATTG
____________________________________________________________
consensus ACATTTTAATTCGAAAATTG
. : . : . : . : . : . :
JMFN004J07+ ATTAACGGTTAGCTACAATAAATTCTGGGCAGATTTATAAGCAAAAGTTTGGAATTTGCC
JMSF035H03+ TAAGCAAAAGTTTGGAATTTGCC
____________________________________________________________
consensus ATTAACGGTTAGCTACAATAAATTCTGGGCAGATTTATAAGCAAAAGTTTGGAATTTGCC
. : . : . : . : . : . :
JMFN004J07+ ATGTCAAACTATATTGAGTGCCCCCATGAAAGTCTAGAAACTAGTCACTGAAAATGAAGG
JMFF016B22+ TGAAGG
JMFN003H03+ CTAGAAACTAGTCACTGAAAATGAAGG
JMSF035H03+ ATGTCAAACTATATTGAGTGCCCCCATGAAAGTCTAGAAACTAGTCACTGAAAATGAAGG
____________________________________________________________
consensus ATGTCAAACTATATTGAGTGCCCCCATGAAAGTCTAGAAACTAGTCACTGAAAATGAAGG
. : . : . : . : . : . :
JMFN004J07+ AACAGTAAAGCATATCTTGCTCAGATAGTCAGATAGCATTGATGTTTTGCACTCTTTTTA
JMFF016B22+ AACAGTAAAGCATATCTTGCTCAGATAGTCAGATAGCATTGATGTTTTGCACTCTTTTTA
JMFN003H03+ AACAGTAAAGCATATCTTGCTCAGATAGTCAGATAGCATTGATGTTTTGCACTCTTTTTA
rJMFF016B22- TCTTGCTCAGATAGTCAGATAGCATTGATGTTTTGCACTCTTTTTA
JMSF035H03+ AACAGTAAAGCATATCTTGCTCAGATAGTCAGATAGCATTGATGTTTTGCACTCTTTTTA
____________________________________________________________
consensus AACAGTAAAGCATATCTTGCTCAGATAGTCAGATAGCATTGATGTTTTGCACTCTTTTTA
. : . : . : . : . : . :
JMFN004J07+ TGACTTAAGATTTTGCTGTTTTGCATAACACATTTATTTTGCCATGACTACATGGAAGCA
JMFF016B22+ TGACTTAAGATTTTGCTGTTTTGCATAACACATTTATTTTGCCATGACTACATGGAAGCA
JMFN003H03+ TGACTTAAGATTTTGCTGTTTTGCATAACACATTTATTTTGCCATGACTACATGGAAGCA
rJMFF016B22- TGACTTAAGATTTTGCTGTTTTGCATAACACATTTATTTTGCCATGACTACATGGAAGCA
JMSF035H03+ TGACTTAAGATTTTGCTGTTTTGCATAACACATTTATTTTGCCATGACTACATGGAAGCA
____________________________________________________________
consensus TGACTTAAGATTTTGCTGTTTTGCATAACACATTTATTTTGCCATGACTACATGGAAGCA
. : . : . : . : . : . :
JMFN004J07+ AGAATTCAACAAGTCAGAGCTCCAGTCCACTTCAGCTCTAGTGAGTTCCTTCTTCCTTGC
JMFF016B22+ AGAATTCAACAAGTCAGAGCTCCAGTCCACTTCAGCTCTAGTGAGTTCCTTCTTCCTTGC
JMFN003H03+ AGAATTCAACAAGTCAGAGCTCCAGTCCACTTCAGCTCTAGTGAGTTCCTTCTTCCTTGC
rJMFF016B22- AGAATTCAACAAGTCAGAGCTCCAGTCCACTTCAGCTCTAGTGAGTTCCTTCTTCCTTGC
JMSF035H03+ AGAATTCAACAAGTCAGAGCTCCAGTCCACTTCAGCTCTAGTGAGTTCCTTCTTCCTTGC
____________________________________________________________
consensus AGAATTCAACAAGTCAGAGCTCCAGTCCACTTCAGCTCTAGTGAGTTCCTTCTTCCTTGC
. : . : . : . : . : . :
JMFN004J07+ TCTTCCCCGATTTCTCTGCCTCAGCTTTGGCTTTCTCTTCTTCTTTCTTCTTCTTCTCCA
JMFF016B22+ TCTTCCCCGATTTCTCTGCCTCAGCTTTGGCTTTCTCTTCTTCTTTCTTCTTCTTCTCCA
JMFN003H03+ TCTTCCCCGATTTCTCTGCCTCAGCTTTGGCTTTCTCTTCTTCTTTCTTCTTCTTCTCCA
rJMFF016B22- TCTTCCCCGATTTCTCTGCCTCAGCTTTGGCTTTCTCTTCTTCTTTCTTCTTCTTCTCCA
JMSF035H03+ TCTTCCCCGATTTCTCTGCCTCAGCTTTGGCTTTCTCTTCTTCTTTCTTCTTCTTCTCCA
____________________________________________________________
consensus TCTTCCCCGATTTCTCTGCCTCAGCTTTGGCTTTCTCTTCTTCTTTCTTCTTCTTCTCCA
. : . : . : . : . : . :
JMFN004J07+ GCCTCTCCTTCTCCATTTTTTTAATATAGACTGTCTCTTTGGCACGCTCTTCCTCGCTGA
JMFF016B22+ GCCTCTCCTTCTCCATTTTTTTAATATAGACTGTCTCTTTGGCACGCTCTTCCTCGCTGA
JMFN003H03+ GCCTCTCCTTCTCCATTTTTTTAATATAGACTGTCTCTTTGGCACGCTCTTCCTCGCTGA
rJMFF016B22- GCCTCTCCTTCTCCATTTTTTTAATATAGACTGTCTCTTTGGCACGCTCTTCCTCGCTGA
JMSF035H03+ GCCTCTCCTTCTCCATTTTTTTAATATAGACTGTCTCTTTGGCACGCTCTTCCTCGCTGA
____________________________________________________________
consensus GCCTCTCCTTCTCCATTTTTTTAATATAGACTGTCTCTTTGGCACGCTCTTCCTCGCTGA
. : . : . : . : . : . :
JMFN004J07+ GGACCCGACCCGATCCATCACTGAAGCAACGGAGACTCATGGCCGATGATCGGCCGACCG
JMFF016B22+ GGACCCGACCCGATCCATCACTGAAGCAACGGAGACTCATGGCCGATGATCGGCCGACCG
JMFN003H03+ GGACCCGACCCGATCCATCACTGAAGCAACGGAGACTCATGGCCGATGATCGGCCGACCG
rJMFF016B22- GGACCCGACCCGATCCATCACTGAAGCAACGGAGACTCATGGCCGATGATCGGCCGACCG
JMSF035H03+ GGACCCGACCCGATCCATCACTGAAGCAACGGAGACTCATGGCCGATGATCGGCCGACCG
____________________________________________________________
consensus GGACCCGACCCGATCCATCACTGAAGCAACGGAGACTCATGGCCGATGATCGGCCGACCG
. : . : . : . : . : . :
JMFN004J07+ GAGAGCTACCGTCCGTTAAACGACGGAGTCCAGTGAGTGAAACGACAGACCGCAGAGCCA
JMFF016B22+ GAGAGCTACCGTCCGTTAAACGACGGAGTCCAGTGAGTGAAACGACAGACCGCAGAGCCA
JMFN003H03+ GAGAGCTACCGTCCGTTAAACGACGGAGTCCAGTGAGTGAAACGACAGACCGCAGAGCCA
rJMFF016B22- GAGAGCTACCGTCCGTTAAACGACGGAGTCCAGTGAGTGAAACGACAGACCGCAGAGCCA
JMSF035H03+ GAGAGCTACCGTCCGTTAAACGACGGAGTCCAGTGAGTGAAACGACAGACCGCAGAGCCA
____________________________________________________________
consensus GAGAGCTACCGTCCGTTAAACGACGGAGTCCAGTGAGTGAAACGACAGACCGCAGAGCCA
. : . : . : . : . : . :
JMFN004J07+ TATTTTCTCCTGAACGAT
JMFF016B22+ TATTTTCTCCTGAACGATGATGACAAGTCAACAAAACCCTAGAGTGGACTAGAGGGC
JMFN003H03+ TATTTTCTCCTGAACGATGATGACAAG
rJMFF016B22- TATTTTCTCCTGAACGATGATGACAAGTCAACAAAACCCTAGAGTGGACTAGAGGGC
JMSF035H03+ TATTTTCTCCTGAACGATGATGACAAGTCAACAAAACCCTAGAGTGGACTAGAGGGCACC
____________________________________________________________
consensus TATTTTCTCCTGAACGATGATGACAAGTCAACAAAACCCTAGAGTGGACTAGAGGGCACC