| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS041A05 | Sequence | 615 | 007970 (5) | ||||||||
| JMFS122D01 | Sequence | 569 | 007970 (5) | ref|XP_009793596.1| | 63.9 | PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris] | |||||
| JMFS158A01 | Sequence | 540 | 007970 (5) | ref|XP_011094094.1| | 1e-06 | PREDICTED: TBC1 domain family member 5 homolog A-like [Sesamum indicum] | |||||
| JMSF022B02 | Sequence | 642 | 007970 (5) | ref|XP_009793596.1| | 94.0 | PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris] | 773 | 014035 (3) | ref|XP_009597928.1| | 219 | PREDICTED: uncharacterized protein LOC104093820 [Nicotiana tomentosiformis] |
| JMSF035E10 | Sequence | 680 | 007970 (5) | ref|XP_011094094.1| | 3e-08 | PREDICTED: TBC1 domain family member 5 homolog A-like [Sesamum indicum] | 716 | 014035 (3) | ref|XP_009793596.1| | 215 | PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF022B02+ GGTACATGTGGATCAATT
____________________________________________________________
consensus GGTACATGTGGATCAATT
. : . : . : . : . : . :
JMFS158A01+ CGGCGAAGA
JMSF022B02+ AGAAGCTGTCTCCTCAGAGAAGCATAACTTCTACGTAAGTCTGCAGTGACGCGGCGAAGA
____________________________________________________________
consensus AGAAGCTGTCTCCTCAGAGAAGCATAACTTCTACGTAAGTCTGCAGTGACGCGGCGAAGA
. : . : . : . : . : . :
JMFS158A01+ TCGACGATGGAAGCAGATGGAGAAGACGGCAAAATCCCCAAATCGATGCGCCATCGCACC
JMSF022B02+ TCGACGATGGAAGCAGATGGAGAAGACGGCAAAATCCCCAAATCGATGCGCCATCGCACC
JMFS122D01+ CC
JMFS041A05+ GGCAAAATCCCCAAATCGATGCGCCATCGCACC
JMSF035E10+ CC
____________________________________________________________
consensus TCGACGATGGAAGCAGATGGAGAAGACGGCAAAATCCCCAAATCGATGCGCCATCGCACC
. : . : . : . : . : . :
JMFS158A01+ CCTCTCAGATCACGGAAACACGGAGTCCTCTGTGGAGATGGAGGAAAAGAAGAAGACGGC
JMSF022B02+ CCTCTCAGATCACGGAAACACGGAGTCCTCTGTGGAGATGGAGGAAAAGAAGAAGACGGC
JMFS122D01+ CCTCTCAGATCACGGAAACACGGAGTCCTCTGTGGAGATGGAGGAAAAGAAGAAGACGGC
JMFS041A05+ CCTCTCAGATCACGGAAACACGGAGTCCTCTGTGGAGATGGAGGAAAAGAAGAAGACGGC
JMSF035E10+ CCTCTCAGATCACGGAAACACGGAGTCCTCTGTGGAGATGGAGGAAAAGAAGAAGACGGC
____________________________________________________________
consensus CCTCTCAGATCACGGAAACACGGAGTCCTCTGTGGAGATGGAGGAAAAGAAGAAGACGGC
. : . : . : . : . : . :
JMFS158A01+ GAAGACGACGACGTCGTTGGAAGCAATGTCTGCTCAATCGGAACCGGCGACATAACCTTT
JMSF022B02+ GAAGACGACGACGTCGTTGGAAGCAATGTCTGCTCAATCGGAACCGGCGACATAACCTTT
JMFS122D01+ GAAGACGACGACGTCGTTGGAAGCAATGTCTGCTCAATCGGAACCGGCGACATAACCTTT
JMFS041A05+ GAAGACGACGACGTCGTTGGAAGCAATGTCTGCTCAATCGGAACCGGCGACATAACCTTT
JMSF035E10+ GAAGACGACGACGTCGTTGGAAGCAATGTCTGCTCAATCGGAACCGGCGACATAACCTTT
____________________________________________________________
consensus GAAGACGACGACGTCGTTGGAAGCAATGTCTGCTCAATCGGAACCGGCGACATAACCTTT
. : . : . : . : . : . :
JMFS158A01+ TCCCTTAGCTTTTCCGTTTTGTAGGCACAGAAATTCCGTGTTGAGCGTCAGAACTTTATC
JMSF022B02+ TCCCTTAGCTTTTCCGTTTTGTAGGCACAGAAATTCCGTGTTGAGCGTCAGAACTTTATC
JMFS122D01+ TCCCTTAGCTTTTCCGTTTTGTAGGCACAGAAATTCCGTGTTGAGCGTCAGAACTTTATC
JMFS041A05+ TCCCTTAGCTTTTCCGTTTTGTAGGCACAGAAATTCCGTGTTGAGCGTCAGAACTTTATC
JMSF035E10+ TCCCTTAGCTTTTCCGTTTTGTAGGCACAGAAATTCCGTGTTGAGCGTCAGAACTTTATC
____________________________________________________________
consensus TCCCTTAGCTTTTCCGTTTTGTAGGCACAGAAATTCCGTGTTGAGCGTCAGAACTTTATC
. : . : . : . : . : . :
JMFS158A01+ ATGAAAATCGTGG-AAAAAAACAAACACAAAAGAACAGCGATTCTAGCACAAATAATCAA
JMSF022B02+ ATGAAAATCGTGG-AAAAAAACAAACACAAAAGAACAGCGATTCTAGCACAAATAATCAA
JMFS122D01+ ATGAAAATCGTGGAAAAAAAACAAACACAAAAGAACAGCGATTCTAGCACAAATAATCAA
JMFS041A05+ ATGAAAATCGTGG-AAAAAAACAAACACAAAAGAACAGCGATTCTAGCACAAATAATCAA
JMSF035E10+ ATGAAAATCGTGGAAAAAAAACAAACACAAAAGAACAGCGATTCTAGCACAAATAATCAA
____________________________________________________________
consensus ATGAAAATCGTGG-AAAAAAACAAACACAAAAGAACAGCGATTCTAGCACAAATAATCAA
. : . : . : . : . : . :
JMFS158A01+ CAAATCTATTTGATGTGGATTTTTCAAAATTGGCGAAACAGAGAATAAGAAAGAATTCTA
JMSF022B02+ CAAATCTATTTGATGTGGATTTTTCAAAATTGGCGAAACAGAGAATAAGAAAGAATTCTA
JMFS122D01+ CAAATCTATTTGATGTGGATTTTTCAAAATTGGCGAAACAGAGAATAAGAAAGAATTCTA
JMFS041A05+ CAAATCTATTTGATGTGGATTTTTCAAAATTGGCGAAACAGAGAATAAGAAAGAATTCTA
JMSF035E10+ CAAATCTATTTGATGTGGATTTTTCAAAATTGGCGAAACAGAGAATAAGAAAGAATTCTA
____________________________________________________________
consensus CAAATCTATTTGATGTGGATTTTTCAAAATTGGCGAAACAGAGAATAAGAAAGAATTCTA
. : . : . : . : . : . :
JMFS158A01+ AAGACCGATGGCTATGGCTGCTGCTCCTAATCTCCGCCTAAATTATACAATCACCACCAA
JMSF022B02+ AAGACCGATGGCTATGGCTGCTGCTCCTAATCTCCGCCTAAATTATACAATCACCACCAA
JMFS122D01+ AAGACCGATGGCTATGGCTGCTGCTCCTAATCTCCGCCTAAATTATACAATCACCACCAA
JMFS041A05+ AAGACCGATGGCTATGGCTGCTGCTCCTAATCTCCGCCTAAATTATACAATCACCACCAA
JMSF035E10+ AAGACCGATGGCTATGGCTGCTGCTCCTAATCTCCGCCTAAATTATACAATCACCACCAA
____________________________________________________________
consensus AAGACCGATGGCTATGGCTGCTGCTCCTAATCTCCGCCTAAATTATACAATCACCACCAA
. : . : . : . : . : . :
JMFS158A01+ GAACAGCGATTTTGGAACAAACAATCAACAAATCTACTTAATTTAATGGGAATTCTCTAT
JMSF022B02+ GAACAGCGATTTTGGAACAAACAATCAACAAATCTACTTAATTTAATGGGAATTCTCTAT
JMFS122D01+ GAACAGCGATTTTGGAACAAACAATCAACAAATCTACTTAATTTAATGGGAATTCTCTAT
JMFS041A05+ GAACAGCGATTTTGGAACAAACAATCAACAAATCTACTTAATTTAATGGGAATTCTCTAT
JMSF035E10+ GAACAGCGATTTTGGAACAAACAATCAACAAATCTACTTAATTTAATGGGAATTCTCTAT
____________________________________________________________
consensus GAACAGCGATTTTGGAACAAACAATCAACAAATCTACTTAATTTAATGGGAATTCTCTAT
. : . : . : . : . : . :
JMFS158A01+ TAGGTAGAGAGATAGATAGAGAATATAGAGAGCGATGGCTAATTGGCTATGG
JMSF022B02+ TAGGTAGAGAGATAGATAGAGAATATAGAGAGCGATGGCTAATTGGCTATGGCTGCTGCT
JMFS122D01+ TAGGTAGAGAGATAGATAGAGAATATAGAGAGCGATGGCTAATTGGCTATGGCTGCTGC
JMFS041A05+ TAGGTAGAGAGATAGATAGAGAATATAGAGAGCGATGGCTAATTGGCTATGGCTGCTGCT
JMSF035E10+ TAGGTAGAGAGATAGATAGAGAATATAGAGAGCGATGGCTAATTGGCTATGGCTGCTGCT
____________________________________________________________
consensus TAGGTAGAGAGATAGATAGAGAATATAGAGAGCGATGGCTAATTGGCTATGGCTGCTGCT
. : . : . : . : . : . :
JMSF022B02+ CCTATTCTCTATTCTAAATTCCTTC
JMFS041A05+ CCTATTCTCTATTCTAAATTCCTTCCAAAAGAGAAATAGAAAGAGAAAGGAAATGAGCCA
JMSF035E10+ CCTATTCTCTATTCTAAATTCCTTCCAAAAGAGAAATAGAAAGAGAAAGGAAATGAGCCA
____________________________________________________________
consensus CCTATTCTCTATTCTAAATTCCTTCCAAAAGAGAAATAGAAAGAGAAAGGAAATGAGCCA
. : . : . : . : . : . :
JMFS041A05+ TATTATCTATTCTATATTTCTTCCAAGAGAGAGAAATAGAAAG
JMSF035E10+ TATTATCTATTCTATATTTCTTCCAAGAGAGAGAAATAGAAAGGGAAAGGAAATGAGCCC
____________________________________________________________
consensus TATTATCTATTCTATATTTCTTCCAAGAGAGAGAAATAGAAAGGGAAAGGAAATGAGCCC