clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF023G18 | Sequence | 411 | 007968 (9) | ref|XP_004239250.1| | 56.2 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 692 | 005740 (6) | ref|XP_009594235.1| | 8e-58 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMFS030D12 | Sequence | 481 | 007968 (9) | ||||||||
JMFS080F07 | Sequence | 624 | 007968 (9) | ref|XP_004239250.1| | 78.6 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | |||||
JMFS148H11 | Sequence | 626 | 007968 (9) | ref|XP_004239250.1| | 76.3 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | |||||
JMSF024F24 | Sequence | 632 | 007968 (9) | ref|XP_010313689.1| | 2e-15 | PREDICTED: uncharacterized protein LOC101260608 isoform X1 [Solanum lycopersicu | 698 | 005740 (6) | ref|XP_008787377.1| | 96.3 | PREDICTED: uncharacterized protein LOC103705447 [Phoenix dactylifera] |
JMSF034C12 | Sequence | 671 | 007968 (9) | ref|XP_004239250.1| | 104 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 749 | 005740 (6) | ref|XP_009594235.1| | 7e-74 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF034J05 | Sequence | 680 | 007968 (9) | ref|XP_004239250.1| | 115 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 726 | 005740 (6) | ref|XP_009594235.1| | 7e-50 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF035C23 | Sequence | 695 | 007968 (9) | ref|XP_004239250.1| | 50.1 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 607 | 005740 (6) | ref|XP_009594235.1| | 5e-24 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF039A16 | Sequence | 673 | 007968 (9) | ref|XP_004239250.1| | 115 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 834 | 005740 (6) | ref|XP_009594235.1| | 1e-86 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
This contig is upended
. : . : . : . : . : . :
JMSF024F24+ CTGTAACATTCAGTATCAGAGAAATGTT
JMFS080F07+ AGAAATGTT
JMSF039A16+ CTGTAACATTCAGTATCAGAGAAATGTT
JMSF034J05+ CTGTAACATTCAGTATCAGAGAAATGTT
JMSF034C12+ GTATCAGAGAAATGTT
____________________________________________________________
consensus CTGTAACATTCAGTATCAGAGAAATGTT
. : . : . : . : . : . :
JMSF024F24+ GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMFS148H11+ AGTCAGGAAGATCAGCATCTTNTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMFS080F07+ GATCAAGCCAGTCAGGAAGATCAGCATCTTNTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMSF039A16+ GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMSF034J05+ GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMSF034C12+ GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
____________________________________________________________
consensus GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
. : . : . : . : . : . :
JMSF024F24+ TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMFS148H11+ TTGAAAAAGATCCCGATCCACGGTCACCAATAACCNCAGGATGCCTTGGACCTGCAACAA
JMFS080F07+ TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMFF023G18+ A
JMSF039A16+ TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMSF034J05+ TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMSF034C12+ TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
____________________________________________________________
consensus TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
. : . : . : . : . : . :
JMSF024F24+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMFS148H11+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMFS080F07+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMFF023G18+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF039A16+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF034J05+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF034C12+ CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF035C23+ CTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
____________________________________________________________
consensus CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
. : . : . : . : . : . :
JMSF024F24+ CAGATCCCTCTTCTTT-TCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFS148H11+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFS080F07+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFF023G18+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMSF039A16+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMSF034J05+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMSF034C12+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFS030D12+ CGCCAA
JMSF035C23+ CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
____________________________________________________________
consensus CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
. : . : . : . : . : . :
JMSF024F24+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFS148H11+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFS080F07+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFF023G18+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMSF039A16+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMSF034J05+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMSF034C12+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFS030D12+ ATCCTCCGGCAACGGGAGCACCGCTACTANTAGTATCCTCCCGCACCTCCTCATCCTNTA
JMSF035C23+ ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
____________________________________________________________
consensus ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
. : . : . : . : . : . :
JMSF024F24+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFS148H11+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFS080F07+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFF023G18+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF039A16+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF034J05+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF034C12+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFS030D12+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF035C23+ AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
____________________________________________________________
consensus AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
. : . : . : . : . : . :
JMSF024F24+ TGAAAACTCCACTATC
JMFS148H11+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMFS080F07+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMFF023G18+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF039A16+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF034J05+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF034C12+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMFS030D12+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF035C23+ TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
____________________________________________________________
consensus TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
. : . : . : . : . : . :
JMFS148H11+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMFS080F07+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMFF023G18+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF039A16+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF034J05+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF034C12+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMFS030D12+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF035C23+ CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
____________________________________________________________
consensus CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
. : . : . : . : . : . :
JMFS148H11+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMFS080F07+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMFF023G18+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTAT
JMSF039A16+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMSF034J05+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMSF034C12+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMFS030D12+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMSF035C23+ CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
____________________________________________________________
consensus CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
. : . : . : . : . : . :
JMFS148H11+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMFS080F07+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGAATGGAATTCTAGGGTTCG
JMSF039A16+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMSF034J05+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMSF034C12+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMFS030D12+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMSF035C23+ GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
____________________________________________________________
consensus GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
. : . : . : . : . : . :
JMFS148H11+ GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGT
JMFS080F07+ GCAGAAAACAGGGAT
JMSF039A16+ GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGAC
JMSF034J05+ GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGT
JMSF034C12+ GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGT
JMFS030D12+ GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGTAGCGTGTAT
JMSF035C23+ GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGTAGCGTGTAT
____________________________________________________________
consensus GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGTAGCGTGTAT
. : . : . : . : . : . :
JMFS030D12+ TGTAGAGTTGCAGGTAGAAATAAATATACGGTGGAGTTGAGGAGAGGAGAGGAGG
JMSF035C23+ TGTAGAGTTGCAGGTAGAAATAAATNTACGGTGGAGTTGAGGAGAGGAGAGGAGGCTCTA
____________________________________________________________
consensus TGTAGAGTTGCAGGTAGAAATAAATATACGGTGGAGTTGAGGAGAGGAGAGGAGGCTCTA
. : . : . : . : . : . :
JMSF035C23+ ATGGGGTCAACGAAAGTGAAAGGAGAGAGAATGCGTTTTTGCACAGAGAGAGAATCAGCC
____________________________________________________________
consensus ATGGGGTCAACGAAAGTGAAAGGAGAGAGAATGCGTTTTTGCACAGAGAGAGAATCAGCC