Contig 007967:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023E05Sequence583007967 (9)ref|XP_009593555.1|3e-36PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor
JMFS051E09Sequence570007967 (9)ref|XP_009593555.1|2e-38PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor
JMFS062E04Sequence627007967 (9)ref|XP_009593555.1|3e-56PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor
JMFS085F08Sequence623007967 (9)ref|XP_009593555.1|2e-45PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor
JMFS093B06Sequence530007967 (9)ref|XP_009773820.1|8e-16PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana sylvestris]
JMFS130E09Sequence561007967 (9)ref|XP_009593555.1|1e-18PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor
JMFS151A06Sequence611007967 (9)ref|XP_009593555.1|3e-44PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor
JMSF014P09Sequence362007967 (9)ref|XP_009593555.1|1e-13PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor775007172 (2)ref|XP_009593556.1|6e-101PREDICTED: receptor-like protein kinase HSL1 isoform X2 [Nicotiana tomentosifor
JMSF035C12Sequence677007967 (9)ref|XP_009593555.1|7e-29PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana tomentosifor725007172 (2)ref|XP_009593556.1|1e-90PREDICTED: receptor-like protein kinase HSL1 isoform X2 [Nicotiana tomentosifor

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+                                           GTTGTAAGCGAGTGCAATCCACTTCCAA
                      ____________________________________________________________
consensus                                             GTTGTAAGCGAGTGCAATCCACTTCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           CTAGTTATGATGTTACCCAGATCGGCGGATATTCCTCCGGTCAGCACTGTTGTCAGTTAA
JMFS062E04+                                                           GTTGTCAGTTAA
                      ____________________________________________________________
consensus             CTAGTTATGATGTTACCCAGATCGGCGGATATTCCTCCGGTCAGCACTGTTGTCAGTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           ATCAAGTTTCTCCAGTGGCCGGAATCTTCCAAAACTGGCTGGAATATCCCCGGAAAAATA
JMFS062E04+           ATCAAGTTTCTCCAGTGCCCGGAATCTTCCAAAACTCGCCGGAATATCCCCGGAAAAATA
JMFS151A06+                                   TCTTCCAAAACTCGCCGGAATATCCCCGGAAAAATA
JMFS051E09+                                                             CGGAAAAATA
JMFS085F08+                             CCGGAATCTTCCAAAACTCGCCGGAATATCCCCGGAAAAATA
                      ____________________________________________________________
consensus             ATCAAGTTTCTCCAGTGGCCGGAATCTTCCAAAACTCGCCGGAATATCCCCGGAAAAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           GCAGTTACTCAAGTCAACATGCCTCAGATAAAGAAGGTCGGCCATGGTGGGAGGAATGGG
JMFS062E04+           GCAGTTACTCAAGTCAAGATGCCTGAGATAAAGAAGGTCGGCGATGGTGGGAGGAATGGG
JMFS151A06+           GCAGTTACTCAAGTCAAGATGCCTGAGATAAAGAAGGTCGGCGATGGTGGGAGGAATGGG
JMFS023E05+           GCAGTTACTCAAGTCAAGATGCCTGAGATAAAGAAGGTCGGCGATGGTGGGAGGAATGGG
JMFS051E09+           GCAGTTACTCAAGTCAAGATGCCTGAGATAAAGAAGGTCGGCGATGGTGGGAGGAATGGG
JMFS085F08+           GCAGTTACTCAAGTCAAGATGCCTGAGATAAAGAAGGTCGGCGATGGTGGGAGGAATGGG
JMSF035C12+                                                   GCGATGGTGGGAGGAATGGG
                      ____________________________________________________________
consensus             GCAGTTACTCAAGTCAAGATGCCTGAGATAAAGAAGGTCGGCGATGGTGGGAGGAATGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           CCCGCTCGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGGCTCGCGGCATTTGTCAATG
JMFS062E04+           GCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
JMFS151A06+           GCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
JMFS023E05+           GCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
JMFS051E09+           GCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
JMFS085F08+           GCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
JMSF035C12+           NCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
                      ____________________________________________________________
consensus             GCCGC-CGAGGAGATTCTCCGACAGGTCGAGATGGGTGAGACTC-CGGCATTTGGAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           GAAACCGGAAGCTAATAGTTTATGTTATCGTTGGAGAGGGTGAGATAGGAAAGAGAGGGG
JMFS062E04+           GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
JMFS151A06+           GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
JMFS023E05+           GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
JMFS051E09+           GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
JMFS085F08+           GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
JMFS130E09+                         AGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
JMSF035C12+           GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
                      ____________________________________________________________
consensus             GAAACCGGAAGCGAAGAGTTTATGTTATTGTTGGAGAGGTTGAGATACGAAAGAGAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           AGGCTGCAGAGCCTCATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGACATGGCGTGGAA
JMFS062E04+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
JMFS151A06+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
JMFS023E05+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
JMFS051E09+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
JMFS085F08+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
JMSF014P09+                                                                CGACNGA
JMFS130E09+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
JMSF035C12+           AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
                      ____________________________________________________________
consensus             AGGCTACAGAG-GACATCCGGGAAGGGGCCCTCCAGATTGGCGCCGGAGATGGCGACGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           CGCGACGGATCCGCCGTAGTAGCATCCGATTCCGGTCCAATTAC-CGGGGAGAGGTCACG
JMFS062E04+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMFS151A06+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMFS023E05+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMFS051E09+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMFS085F08+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMSF014P09+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMFS130E09+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
JMSF035C12+           GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
                      ____________________________________________________________
consensus             GACGACGGAGCCGCCGTCGTCGCAGCCGATTCCGGTCCAATTACACGGGGAGAGATCACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           TTCAGTCCAGGAAGAAAACGCTCCGTTGGGATCACGCATCGAAAGCCTCAGCCTTTGGAG
JMFS062E04+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMFS151A06+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMFS023E05+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMFS051E09+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMFS085F08+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMSF014P09+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMFS130E09+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
JMSF035C12+           TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
                      ____________________________________________________________
consensus             TTCAGACCAGGAAGAAAACGCGCCGTTGGGATCACACAGCGAAAGCTTCAGCCTTTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093B06+           GTAAAGCCCTTAGTGATTCAAC                                      
JMFS062E04+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMFS151A06+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMFS023E05+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMFS051E09+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMFS085F08+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMSF014P09+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMFS130E09+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
JMSF035C12+           GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
                      ____________________________________________________________
consensus             GTAAAGCCCTTCTTGATTCAACGCGGTAACAGCGAAGGGAAGACGAAGAGCCCCAAAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E04+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMFS151A06+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMFS023E05+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMFS051E09+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMFS085F08+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMSF014P09+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMFS130E09+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
JMSF035C12+           AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
                      ____________________________________________________________
consensus             AAAGAGGAAGAAGAAGAAGAAGAGAAAAGGTGAGCTTGAAAGCGTCATTTGCATGGCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E04+           GGCTTTCGTTCATGCACAGCGTTTTC                                  
JMFS151A06+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
JMFS023E05+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
JMFS051E09+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
JMFS085F08+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
JMSF014P09+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
JMFS130E09+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
JMSF035C12+           GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
                      ____________________________________________________________
consensus             GGCTTTCGTTCATGCACAGCGTTTTCGTCTACCGTTCTTTTACTGCTTCTTCTTGTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151A06+           ACATGTATATATATAGGTATACAGCCATGAATTTGAAA                      
JMFS023E05+           ACATGTATATATATAGGTATACAGCCATGAATTT                          
JMFS051E09+           ACATGTATATATATAGGTATACA                                     
JMFS085F08+           ACATGTATATATATAGGTATACAGCCATGAATTTGAAACAGA                  
JMSF014P09+           ACATGTATATATATAGGTATACAGCCATGAATTTGAAACAGAAGCTGCTGTGTT      
JMFS130E09+           ACATGTATATATATAGGTATACAGCCATGAATTTGAAACAGAAGCTGCTGTGTTGTTTTC
JMSF035C12+           ACATGTATATATATAGGTATACAGCCATGAATTTGAAACAGAAGCTGCTGTGTTGTTTTC
                      ____________________________________________________________
consensus             ACATGTATATATATAGGTATACAGCCATGAATTTGAAACAGAAGCTGCTGTGTTGTTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130E09+           TCTGTGAAATGGGTTGAGTTTGGGACTTATAGGGGTAGTGAGGGTTGGGGGTAGGGGGGC
JMSF035C12+           TCTGTGAAATGGGTTGAGTTTGGGACTTATAGGGGTAGTGAGGGTTGGGGGTAGGGGGGC
                      ____________________________________________________________
consensus             TCTGTGAAATGGGTTGAGTTTGGGACTTATAGGGGTAGTGAGGGTTGGGGGTAGGGGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130E09+           ACCGTAACGGCAATGGTGGAGGGAAGAAAAATGTGT                        
JMSF035C12+           ACCGTAACGGCAATGGTGGAGGGAAGAAAAATGTGTGTTGTGGGGAAGTGTAATATTTCC
                      ____________________________________________________________
consensus             ACCGTAACGGCAATGGTGGAGGGAAGAAAAATGTGTGTTGTGGGGAAGTGTAATATTTCC