| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS001D09 | Sequence | 546 | 007966 (11) | ref|XP_009774294.1| | 131 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS012H06 | Sequence | 626 | 007966 (11) | ref|XP_009774294.1| | 180 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS030F07 | Sequence | 538 | 007966 (11) | ref|XP_009774294.1| | 133 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS035G11 | Sequence | 600 | 007966 (11) | ref|XP_009774294.1| | 167 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS086G08 | Sequence | 643 | 007966 (11) | ref|XP_009774294.1| | 189 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS095B12 | Sequence | 607 | 007966 (11) | ref|XP_009774294.1| | 166 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS159B04 | Sequence | 404 | 007966 (11) | ref|XP_009774294.1| | 54.3 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMFS163B10 | Sequence | 577 | 007966 (11) | ref|XP_009774294.1| | 154 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | |||||
| JMSF035B16 | Sequence | 604 | 007966 (11) | ref|XP_009774294.1| | 131 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | 255 | 014037 (3) | |||
| JMSF035M11 | Sequence | 594 | 007966 (11) | ref|XP_009774294.1| | 161 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | 713 | 014037 (3) | gb|ABK94612.1| | 3e-78 | unknown [Populus trichocarpa] |
| JMSF043P20 | Sequence | 741 | 007966 (11) | ref|XP_009774294.1| | 246 | PREDICTED: serine/threonine-protein kinase EDR1 [Nicotiana sylvestris] | 718 | 014037 (3) | gb|ABK94612.1| | 1e-87 | unknown [Populus trichocarpa] |
This contig is upended
. : . : . : . : . : . :
JMSF043P20+ GCCCACCCAACTGTTCTGTTACAAGTT
____________________________________________________________
consensus GCCCACCCAACTGTTCTGTTACAAGTT
. : . : . : . : . : . :
JMSF043P20+ CAGCAAGTCTCTGAACTAGCAGACCAACCTCACTGGCAGGGGAGTCTAACGCAATGCAAT
____________________________________________________________
consensus CAGCAAGTCTCTGAACTAGCAGACCAACCTCACTGGCAGGGGAGTCTAACGCAATGCAAT
. : . : . : . : . : . :
JMSF043P20+ GTGCAATCTGCATAAGCTCCTCCAAGGAAGGGTCAATTTTCCGATTAACTATCACAACTT
JMFS086G08+ ATAAGCTCCTCCAAGAAAGGGTCAATTTTCCGATTAACTATCACAACTT
JMSF035M11+ T
JMFS035G11+ CAACTT
JMFS012H06+ GGTCAATTTTCCGATTAACTATCACAACTT
____________________________________________________________
consensus GTGCAATCTGCATAAGCTCCTCCAAGGAAGGGTCAATTTTCCGATTAACTATCACAACTT
. : . : . : . : . : . :
JMSF043P20+ CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMFS086G08+ CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMSF035M11+ CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMFS035G11+ CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMFS030F07+ CGAC
JMFS012H06+ CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMFS163B10+ TTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMFS095B12+ CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
JMSF035B16+ CGAC
____________________________________________________________
consensus CGAAGTCAGAACTCCCACCATTTGTTTCCAGTTCAGATAGAGATGGCATTTTCCCTCGAC
. : . : . : . : . : . :
JMSF043P20+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS086G08+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMSF035M11+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS035G11+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS030F07+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS012H06+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS163B10+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS095B12+ TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMFS001D09+ GAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
JMSF035B16+ TTGCAGAATTGTNGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
____________________________________________________________
consensus TTGCAGAATTGTTGAAGAGGCTATATACATCATAGAAGCCATCAACAACTTTTTCCTCAT
. : . : . : . : . : . :
JMSF043P20+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS086G08+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMSF035M11+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS035G11+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS030F07+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS012H06+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS163B10+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS095B12+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMFS001D09+ AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
JMSF035B16+ AGTCAAGAACACTGTAATCCCAATANTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
____________________________________________________________
consensus AGTCAAGAACACTGTAATCCCAATACTGCCTCGACAGCAAGTCCGCAGTCGCTTCCTCCC
. : . : . : . : . : . :
JMSF043P20+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS086G08+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMSF035M11+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS035G11+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS030F07+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS012H06+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS163B10+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS095B12+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS159B04+ CATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMFS001D09+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
JMSF035B16+ TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
____________________________________________________________
consensus TTTCCCGAGCCGAGTCGGCACCATATCTCCCTCCACCGAGGATTTGACCTTTGCCGGAGT
. : . : . : . : . : . :
JMSF043P20+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS086G08+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMSF035M11+ CAACATCGCNCCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGNTAAGGCAA
JMFS035G11+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS030F07+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS012H06+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS163B10+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS095B12+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS159B04+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMFS001D09+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
JMSF035B16+ CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGNTAAGGCAA
____________________________________________________________
consensus CAACATCGCACCGAAAAGACTCCTCAGCCTGCGACGAGGAGACACTCAGGGCTAAGGCAA
. : . : . : . : . : . :
JMSF043P20+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS086G08+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMSF035M11+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS035G11+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS030F07+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS012H06+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS163B10+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS095B12+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS159B04+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMFS001D09+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
JMSF035B16+ GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
____________________________________________________________
consensus GTTGTATCTGGTAATCCTCCTCCGAGGCAAAGTAATCCTGCTGCCGATTGACCGGCGGCG
. : . : . : . : . : . :
JMSF043P20+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS086G08+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMSF035M11+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS035G11+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS030F07+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS012H06+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS163B10+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS095B12+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS159B04+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMFS001D09+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
JMSF035B16+ CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGNGGCGGCGTTGTTGAAGGAC
____________________________________________________________
consensus CTCCTCCACCGGCAAGCGGCGCGGCGACAGTTAAAGCCGGCGGCGGCGTTGTTGAAGGAC
. : . : . : . : . : . :
JMSF043P20+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS086G08+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMSF035M11+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS035G11+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS030F07+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS012H06+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS163B10+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS095B12+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS159B04+ TCTCCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMFS001D09+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
JMSF035B16+ TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
____________________________________________________________
consensus TCTGCGGCGACTGCGAGTGTGTAGAAGCGCGGTGATCGGAGGCACAAGACTGCGACGATG
. : . : . : . : . : . :
JMSF043P20+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS086G08+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMSF035M11+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS035G11+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS030F07+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS012H06+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS163B10+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS095B12+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS159B04+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMFS001D09+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
JMSF035B16+ ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
____________________________________________________________
consensus ATGACGTCAACGCGGTCGAAGAAGAGGAGGAGGAGGAGGAAGAAGATTGAGTAGTCTCGT
. : . : . : . : . : . :
JMSF043P20+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTT
JMFS086G08+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTG
JMSF035M11+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGT
JMFS035G11+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTG
JMFS030F07+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTG
JMFS012H06+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTGTT
JMFS163B10+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTGTTTCCA
JMFS095B12+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTGTTTCCA
JMFS159B04+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGCAAATATGCTTCATAGTTGTTTCCA
JMFS001D09+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTGTTTCCA
JMSF035B16+ TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTGTTTCCA
____________________________________________________________
consensus TCGATCGATTGGGGTGGTGAGGAGGCTTCTTCTTGAAAATATGCTTCATAGTTGTTTCCA
. : . : . : . : . : . :
JMFS163B10+ CT
JMFS095B12+ CTTTC
JMFS159B04+ CTTTC
JMFS001D09+ CTTTC
JMSF035B16+ CTTTCTCTCTCTCTCTATTTCTCTATCACTCGGCTCTTCCTTTCTCTCTCTATATCTACC
____________________________________________________________
consensus CTTTCTCTCTCTCTCTATTTCTCTATCACTCGGCTCTTCCTTTCTCTCTCTATATCTACC