clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF018H01 | Sequence | 556 | 007963 (6) | ref|XP_009801872.1| | 6e-63 | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, ch | 648 | 007963 (6) | gb|EPS61829.1| | 2e-54 | hypothetical protein M569_12964, partial [Genlisea aurea] |
JMFF028J22 | Sequence | 530 | 007963 (6) | ref|XP_009801872.1| | 4e-53 | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, ch | |||||
JMSF034I14 | Sequence | 686 | 007963 (6) | ref|XP_009801872.1| | 1e-68 | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, ch | 532 | 007963 (6) | emb|CDP08336.1| | 2e-22 | unnamed protein product [Coffea canephora] |
JMSF048G19 | Sequence | 694 | 007963 (6) | ref|XP_009801872.1| | 4e-76 | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, ch |
This contig is upended
. : . : . : . : . : . :
rJMFF018H01- TTTTGTTCTCATTTCACTAAAAAAAA
____________________________________________________________
consensus TTTTGTTCTCATTTCACTAAAAAAAA
. : . : . : . : . : . :
rJMSF034I14- ATTAAACTCTAANAACANG
rJMFF018H01- AAAGCATTTTTACAGCATCATCATGTACTCTCATCAGTAATATTAAACTCTAANAACATG
____________________________________________________________
consensus AAAGCATTTTTACAGCATCATCATGTACTCTCATCAGTAATATTAAACTCTAANAACATG
. : . : . : . : . : . :
rJMSF034I14- TAAGGAAACTNGTAANGACAATACTACAGAACAATACAAGTTCTATNGAANAGCCTTTCT
rJMFF018H01- TAATGAAACTTGTAATGACAATACTACAGAACAATACAAGTTCTATTGAATANCCTTTCT
____________________________________________________________
consensus TAATGAAACTTGTAATGACAATACTACAGAACAATACAAGTTCTATTGAATAGCCTTTCT
. : . : . : . : . : . :
rJMSF034I14- TCNATGAATTGCCGGTANANGGGGGATTGCCAAACGNCNAATTCNGCCTNGATNGCCCAT
rJMFF018H01- TCNATGAATTGCAGGTAAATGGTGGATTGCCAAACGTCNAATTCTGCCTTGATTGCCCAT
____________________________________________________________
consensus TCNATGAATTGCCGGTAAATGGTGGATTGCCAAACGTCNAATTCTGCCTTGATTGCCCAT
. : . : . : . : . : . :
rJMSF034I14- CAAANACCTNGGGGGANGTTTTAATTTAAACAAACCGGGCCTTCTTCACGTCAAANANAA
rJMFF018H01- CAAATACCTTGNGGGATGTTTTAATTTAAACAAACCGGGCCTTCTTCACGTCANACATAA
____________________________________________________________
consensus CAAATACCTTGGGGGATGTTTTAATTTAAACAAACCGGGCCTTCTTCACGTCAAACATAA
. : . : . : . : . : . :
rJMSF034I14- GGCTTTTATCTTCGTNGCCCCNCNCGTTGTAAANAACCTTATCAANGATTCCATATTCNA
rJMFF018H01- TGCTTTTATCTTCGTTGCCCCTCTCGTTGTAAANAACCTTATCAATGATTCCATATTCNA
____________________________________________________________
consensus TGCTTTTATCTTCGTTGCCCCTCTCGTTGTAAANAACCTTATCAATGATTCCATATTCNA
. : . : . : . : . : . :
rJMSF034I14- CGGCTTCNCTNGGGCNGAAANATTTNGGGNGNCTNANGNCCNCTTCAANCNGTTCTNGGG
rJMFF018H01- CTGCTTCACTTGGGCTGAAATATTTTGGGCGTCTTATGTCCTCTTCAATCTGTTCTTGNG
____________________________________________________________
consensus CTGCTTCACTTGGGCTGAAATATTTTGGGCGTCTTATGTCCTCTTCAATCTGTTCTTGGG
. : . : . : . : . : . :
rJMSF034I14- TTTTTCCCANANGTTTNGCGNAAAGTTTCNCCAACTCATCTTTCANGGGCTTCATTTCTN
rJMFF018H01- TTTTTCCCATATGTTTTGCGNAAAGTTTCACCAACTCATCTTTCACGNGCTTCATTTCTT
____________________________________________________________
consensus TTTTTCCCATATGTTTTGCGNAAAGTTTCACCAACTCATCTTTCACGGGCTTCATTTCTT
. : . : . : . : . : . :
rJMSF034I14- GCCNCATTANATTGACATCNGTNGCTNGGCCCTGAAACCGACCGANAGGCNGTTTGANCA
rJMFF018H01- GCCTCATTANATTGACATCTGTTGCTTGGCCCTGAAACCGACCGATAGGCTGTTTGATCA
JMSF048G19+ CATTATATTGACATCTGTTGCTTGGCCCTGAAACCGACCGATAGGCTGTTTGATCA
JMSF034I14+ AAACCGACCGATAGGCTGTTTGATCA
____________________________________________________________
consensus GCCTCATTATATTGACATCTGTTGCTTGGCCCTGAAACCGACCGATAGGCTGTTTGATCA
. : . : . : . : . : . :
rJMSF034I14- TGATTGTCGATNAAGCCAAGGCAGCACGATTTCCTGTTGCACCAGCTGCCANAAGCAATG
rJMFF018H01- TGATTGTCGATGAAGCCAAGGCAGCACNATTTCCTGTTGCNCCAGCTGCCANAAGCAATG
JMSF048G19+ TGATTGTCGATGAAGCCAAGGCAGCACGATTTCCTGTTGCACCAGCTGCCAGAAGCAATG
JMSF034I14+ TGATTGTCGATGAAGCCAAGGCAGCACGATTTCCTGTTGCACCAGCTGCCAGAAGCAATG
____________________________________________________________
consensus TGATTGTCGATGAAGCCAAGGCAGCACGATTTCCTGTTGCACCAGCTGCCAGAAGCAATG
. : . : . : . : . : . :
rJMSF034I14- CAGCTTCCCCCCAAGCGTTGCCTACACAAAG
rJMFF018H01- CAGCTTCCCCCCAAGCGTTGCCTACACAAAGTGTGAAAATAGGTGGCTGGACATGCCTCA
JMSF048G19+ CAGCTTCCCCCCAAGCGTTGCCTACACAAAGTGTGAAAATAGGTGGCTGGACATGCCTCA
JMFF018H01+ CACAAAGTGTGAAAATAGGTGGCTGGACATGCCTCA
JMSF034I14+ CAGCTTCCCCCCAAGCGTTGCCTACACAAAGTGTGAAAATAGGTGGCTGGACATGCCTCA
____________________________________________________________
consensus CAGCTTCCCCCCAAGCGTTGCCTACACAAAGTGTGAAAATAGGTGGCTGGACATGCCTCA
. : . : . : . : . : . :
rJMFF018H01- TGGCATCATAAACAGCAAAAGC
JMSF048G19+ TGGCATCATAAACAGCAAAAGCCTCTGTTTCATATCCCAACTTTTCACCACCCTTAGTTG
JMFF018H01+ TGGCATCATAAACAGCAAAAGCCTCTGTTTCATATCCCAACTTTTCACCACCCTTAGTTG
JMFF028J22+ GGCATCATAAACAGCAAAAGCCTCTGTTTCATATCCCAACTTTTCACCACCCTTAGTTG
JMSF034I14+ TGGCATCATAAACAGCAAAAGCCTCTGTTTCATATCCCAACTTTTCACCACCCTTAGTTG
____________________________________________________________
consensus TGGCATCATAAACAGCAAAAGCCTCTGTTTCATATCCCAACTTTTCACCACCCTTAGTTG
. : . : . : . : . : . :
JMSF048G19+ TACCAGTGGAATTAATGTAAAAGTAAATTGGTTTACTCGCATCTTCATACTGAAGGTATA
JMFF018H01+ TACCAGTGGAATTAATGTAAAAGTAAATTGGTTTACTCGCATCTTCATACTGAAGGTATA
JMFF028J22+ TACCAGTGGAATTAATGTAAAAGTAAATTGGTTTACTCGCATCTTCATACTGAAGGTATA
JMSF034I14+ TACCAGTGGAATTAATGTAAAAGTAAATTGGTTTACTCGCATCTTCATACTGAAGGTATA
____________________________________________________________
consensus TACCAGTGGAATTAATGTAAAAGTAAATTGGTTTACTCGCATCTTCATACTGAAGGTATA
. : . : . : . : . : . :
JMSF048G19+ TAAACTCTGCTAGTATCAGTTCAGTCACGGAAGGAACCAGAGGCATGCCCAAATAAACTA
JMFF018H01+ TAAACTCTGCTAGTATCAGTTCAGTCACGGAAGGAACCAGAGGCATGCCCAAATAAACTA
JMFF028J22+ TAAACTCTGCTAGTATCAGTTCAGTCACGGAAGGAACCAGAGGCATGCCCAAATAAACTA
JMSF034I14+ TAAACTCTGCTAGTATCAGTTCAGTCACGGAAGGAACCAGAGGCATGCCCAAATAAACTA
____________________________________________________________
consensus TAAACTCTGCTAGTATCAGTTCAGTCACGGAAGGAACCAGAGGCATGCCCAAATAAACTA
. : . : . : . : . : . :
JMSF048G19+ TCCGATTCTTATACAAGTAAGATGCTAAATCCGGAGGAGGTTGCTCCCAAGCACTTCCCT
JMFF018H01+ TCCGATTCTTATACAAGTAAGATGCTAAATCCGGAGGAGGTTGCTCCCAAGCACTTCCCT
JMFF028J22+ TCCGATTCTTATACAAGTAAGATGCTAAATCCGGAGGAGGTTGCTCCCAAGCACTTCCCT
JMSF034I14+ TCCGATTCTTATACAAGTAAGATGCTAAATCCGGAGGAGGTTGCTCCCAAGCACTTCCCT
____________________________________________________________
consensus TCCGATTCTTATACAAGTAAGATGCTAAATCCGGAGGAGGTTGCTCCCAAGCACTTCCCT
. : . : . : . : . : . :
JMSF048G19+ TCGAGAAAGGAATGACCATAGTGAAAACGCCGCGTTTAGGGCGGGAGCTGGGAGAAGAAG
JMFF018H01+ TCGAGAAAGGAATGACCATAGTGAAAACGCCGCGTTTAGGGCGGGAGCTGGGAGAAGAAG
JMFF028J22+ TCGAGAAAGGAATGACCATAGTGAAAACGCCGCGTTTAGGGCGGGAGCTGGGAGAAGAAG
JMSF034I14+ TCGAGAAAGGAATGACCATAGTGAAAACGCCGCGTTTAGGGCGGGAGCTGGGAGAAGAAG
____________________________________________________________
consensus TCGAGAAAGGAATGACCATAGTGAAAACGCCGCGTTTAGGGCGGGAGCTGGGAGAAGAAG
. : . : . : . : . : . :
JMSF048G19+ GGTTGAGGGAATTAGGTCGAATTTTATAGCCCGAAAATTCGGAGAGTGCACTGCCGGCGG
JMFF018H01+ GGTTGAGGGAATTAGGTCGAATTTTATAGCCCGAAAATTCGGAGAGTGCACTGCCGGCGG
JMFF028J22+ GGTTGAGGGAATTAGGTCGAATTTTATAGCCCGAAAATTCGGAGAGTGCACTGCCGGCGG
JMSF034I14+ GGTTGAGGGAATTAGGTCGAATTTTATAGCCCGAAAATTCGGAGAGTGCACTGCCGGCGG
____________________________________________________________
consensus GGTTGAGGGAATTAGGTCGAATTTTATAGCCCGAAAATTCGGAGAGTGCACTGCCGGCGG
. : . : . : . : . : . :
JMSF048G19+ CGGAGGGAGAGAGGAAGCTGGTGGAGAGAGAGAGCCTGGGAGAAGGAGATGACGTCAATG
JMFF018H01+ CGGAGGGAGAGAGGAAGCTGGTGGAGAGAGAGAGCCTGGGAGAAGGAGATGACGTCAATG
JMFF028J22+ CGGAGGGAGAGAGGAAGCTGGTGGAGAGAGAGAGCCTGGGAGAAGGAGATGACGTCAATG
JMSF034I14+ CGGAGGGAGAGAGGAAGCTGGTGGAGAGAGAGAGCCTGGGAGAAGGAGATGACGTCAATG
____________________________________________________________
consensus CGGAGGGAGAGAGGAAGCTGGTGGAGAGAGAGAGCCTGGGAGAAGGAGATGACGTCAATG
. : . : . : . : . : . :
JMSF048G19+ CTGCGCCGGAAAGTGACGCACGGGAGCTCGCACGTGACGGAAGCATGGCTCGGGTCGTCG
JMFF018H01+ CTGCGCCGGAAAGTGACGCACGGGAGCTCGCACGTGACGGAAGCATGGCTCGGGTCGTCG
JMFF028J22+ CTGCGCCGGAAAGTGACGCACGGGAGCTCGCACGTGACGGAAGCATGGCTCGGGTCGTCG
JMSF034I14+ CTGCGCCGGAAAGTGACGCACGGGAGCTCGCACGTGACGGAAGCATGGCTCGGGTCGTCG
____________________________________________________________
consensus CTGCGCCGGAAAGTGACGCACGGGAGCTCGCACGTGACGGAAGCATGGCTCGGGTCGTCG
. : . : . : . : . : . :
JMSF048G19+ GAAAGATGTGTGAAGCCATGGTTGCTGCTTCCAT
JMFF018H01+ GAAAGATGTGTGAAGCCATGGTTGCTGCTTCCAT
JMFF028J22+ GAAAGATGTGTGAAGCCATGGTTGCTGCTTCCATGGATGAGAGAGATT
JMSF034I14+ GAAAGATGTGTGAAGCCATGGTTGCTGCTTCCATGGATGAGAGAGATTGAGAGTAGCGTC
____________________________________________________________
consensus GAAAGATGTGTGAAGCCATGGTTGCTGCTTCCATGGATGAGAGAGATTGAGAGTAGCGTC