Contig 007962:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF034F18+                                                    AAAAAAAAAAAAAAACGTG
                      ____________________________________________________________
consensus                                                      AAAAAAAAAAAAAAACGTG
 
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JMSF034F18+           GCACATTCATAACAAAATTAGCCAATCATATTGAACTGTTGTCCAGTCAGCACTGCCAAC
                      ____________________________________________________________
consensus             GCACATTCATAACAAAATTAGCCAATCATATTGAACTGTTGTCCAGTCAGCACTGCCAAC
 
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JMSF034F18+           TCATCTGAGGCTTACCTTCCTAGGCAAGTCAGGACTTATGATACTAATTGCCACTTGAGT
                      ____________________________________________________________
consensus             TCATCTGAGGCTTACCTTCCTAGGCAAGTCAGGACTTATGATACTAATTGCCACTTGAGT
 
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JMSF034F18+           TCATGTAGGCGAATCAGTGCGTGCAATAAATATGTACCATGAATTGCTGCACTATAAGCA
                      ____________________________________________________________
consensus             TCATGTAGGCGAATCAGTGCGTGCAATAAATATGTACCATGAATTGCTGCACTATAAGCA
 
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JMSF034F18+           GAATAACAACTATTGTATCAACTTACTGCAATATATGGTCACCAATGAAATTATTTATCC
                      ____________________________________________________________
consensus             GAATAACAACTATTGTATCAACTTACTGCAATATATGGTCACCAATGAAATTATTTATCC
 
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JMSF034F18+           TAGACATCAGCACAATCTGAACAACTGAACAAGGATCATATGAACTTAGAAATTAAATTC
                      ____________________________________________________________
consensus             TAGACATCAGCACAATCTGAACAACTGAACAAGGATCATATGAACTTAGAAATTAAATTC
 
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JMSF034F18+           TATAGTCACAGACTCACAGAAAGTAGTTATCATTTTAACACAAGCATGACCTTAAGATAT
                      ____________________________________________________________
consensus             TATAGTCACAGACTCACAGAAAGTAGTTATCATTTTAACACAAGCATGACCTTAAGATAT
 
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JMSF005N01+                                                          CCAATAGGTTTAT
JMSF034F18+           ATTACTCCGTACATCTATGCATAAAATAAGAATGCATTTCAAAATTACCAATAGGTTTAT
                      ____________________________________________________________
consensus             ATTACTCCGTACATCTATGCATAAAATAAGAATGCATTTCAAAATTACCAATAGGTTTAT
 
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JMSF005N01+           GTGTATTGGGGTACATTGATCGGGAATCTCCGGAGCTATAATCGATTCTTCTGATAGTAT
JMSF034F18+           GTGTATTGGGGTACATTGATCGGGAATCTCCGGAGCTATAATCGATTCTTCTGATAGTAT
                      ____________________________________________________________
consensus             GTGTATTGGGGTACATTGATCGGGAATCTCCGGAGCTATAATCGATTCTTCTGATAGTAT
 
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JMSF005N01+           ATCTTTCACAATACCATACCTAGATACAGTACAGAGATGTTTCCGAACATCGAAAACTCC
JMSF034F18+           ATCTTTCACAATACCATACCTAGATACAGTACAGAGATGTTTCCGAACATCGAAAACTCC
                      ____________________________________________________________
consensus             ATCTTTCACAATACCATACCTAGATACAGTACAGAGATGTTTCCGAACATCGAAAACTCC
 
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JMSF005N01+           TTCAGCGCTTGAATATAGGGTAAATTCACTGAGAAAAATTACAAATAAAACTGCGACTTC
JMSF034F18+           TTCAGCGCTTGAATATAGGGTAAATTCACTGAGAAAAATTACAAATAAAACTGCGACTTC
                      ____________________________________________________________
consensus             TTCAGCGCTTGAATATAGGGTAAATTCACTGAGAAAAATTACAAATAAAACTGCGACTTC
 
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JMSF005N01+           CACGGCCTTCTTCATCTCTCCTCTCTAATTCT                            
JMSF034F18+           CACGGCCTTCTTCATCTCTCCTCTCTAATTCTGGAATTACCGAATCTACGGCAACTTTTC
                      ____________________________________________________________
consensus             CACGGCCTTCTTCATCTCTCCTCTCTAATTCTGGAATTACCGAATCTACGGCAACTTTTC