Contig 007960:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF022A18+             GCGATGAAACTGTAGAGGAAGAGGTTCCTGTTCGTCGAACATTTGGGGAAGGGGTACG
                      ____________________________________________________________
consensus               GCGATGAAACTGTAGAGGAAGAGGTTCCTGTTCGTCGAACATTTGGGGAAGGGGTACG
 
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JMSF022A18+           CCTAGGAGTGGGGGATTTGTACCTAGAACTAATTTCTCTGGTTTGAGAACGGCGAGTGGC
                      ____________________________________________________________
consensus             CCTAGGAGTGGGGGATTTGTACCTAGAACTAATTTCTCTGGTTTGAGAACGGCGAGTGGC
 
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JMFF028I13+                              GCCGGAAACAATGGTGGTTGTGGGATCTCCGCTGCTGAAAA
JMSF022A18+           GATTCCATTATTCATGTCGGCCGGAAACAATGGTGGTTGTGGGATCTCCGCTGCTGAAAA
JMSF034D05+                                                          CCGCTGCTGAAAA
                      ____________________________________________________________
consensus             GATTCCATTATTCATGTCGGCCGGAAACAATGGTGGTTGTGGGATCTCCGCTGCTGAAAA
 
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JMFF028I13+           GCTTGTTTGGTGCCTGCTGTGGTTCATACACATCCATCCAAACTGTCCAAATTAGACCAC
JMSF022A18+           GCTTGTTTGGTGCCTGCTGTGGTTCATACACATCCATCCAAACTGTCCAAATTAGACCAC
JMSF034D05+           GCTTGTTTGGTGCCTGCTGTGGTTCATACACATCCATCCAAACTGTCCAAATTAGACCAC
                      ____________________________________________________________
consensus             GCTTGTTTGGTGCCTGCTGTGGTTCATACACATCCATCCAAACTGTCCAAATTAGACCAC
 
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JMFF028I13+           ATTGGTGCCCTCTCTTTCACACAATAATTAACCACATTTCTGACAGACTTTCACAAAAAC
JMSF022A18+           ATTGGTGCCCTCTCTTTCACACAATAATTAACCACATTTCTGACAGACTTTCACAAAAAC
JMSF034D05+           ATTGGTGCCCTCTCTTTCACACAATAATTAACCACATTTCTGACAGACTTTCACAAAAAC
                      ____________________________________________________________
consensus             ATTGGTGCCCTCTCTTTCACACAATAATTAACCACATTTCTGACAGACTTTCACAAAAAC
 
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JMFF028I13+           CCCCACATTAATCTGATTATAATTCCCACCAATTGCTCTCTTAAAGAAGACTCCTTTTTC
JMSF022A18+           CCCCACATTAATCTGATTATAATTCCCACCAATTGCTCTCTTAAAGAAGACTCCTTTTTC
JMSF034D05+           CCCCACATTAATCTGATTATAATTCCCACCAATTGCTCTCTTAAAGAAGACTCCTTTTTC
                      ____________________________________________________________
consensus             CCCCACATTAATCTGATTATAATTCCCACCAATTGCTCTCTTAAAGAAGACTCCTTTTTC
 
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JMFF028I13+           TGGAATAAAT------CCAGATCTGAAGACGGATGAACAGGGTACTGGTGGGATTCTGGG
JMSF022A18+           TGGAATAAAT------CCAGATCTGAAGACGGATGAACAGGGTACTGGTGGGATTCTGGG
JMSF034D05+           TGGAATAAATAGATACCCAGATCTGAAGACGGATGAACAGGGTACTGGTGGGATTCTGGG
                      ____________________________________________________________
consensus             TGGAATAAAT------CCAGATCTGAAGACGGATGAACAGGGTACTGGTGGGATTCTGGG
 
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JMFF028I13+           AACAAATCAATGCCAATGGGTATTCTCTACAAATCAAGAGTATAGCAAAAACAGGCAGAT
JMSF022A18+           AACAAATCAATGCCAATGGGTATTCTCTACAAATCAAGAGTATAGCAAAAACAGGCAGAT
JMSF034D05+           AACAAATCAATGCCAATGGGTATTCTCTACAAATCAAGAGTATAGCAAAAACAGGCAGAT
                      ____________________________________________________________
consensus             AACAAATCAATGCCAATGGGTATTCTCTACAAATCAAGAGTATAGCAAAAACAGGCAGAT
 
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JMFF028I13+           CAGAGCCAAGAAAAGCTCAATAAGTGACTACTCTCCAGTCTCCACATACACCCAGTTGTA
JMSF022A18+           CAGAGCCAAGAAAAGCTCAATAAGTGACTACTCTCCAGTCTCCACATACACCCAGTTGTA
JMSF034D05+           CAGAGCCAAGAAAAGCTCAATAAGTGACTACTCTCCAGTCTCCACATACACCCAGTTGTA
                      ____________________________________________________________
consensus             CAGAGCCAAGAAAAGCTCAATAAGTGACTACTCTCCAGTCTCCACATACACCCAGTTGTA
 
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JMFF028I13+           TTTTATGAACAAAAATGTACATTCCCAGTGATAACAAAGGGATTCACAAGTCCAAAACCT
JMSF022A18+           TTTTATGAACAAAAATGTACATTCCCAGTGATAACAAAGGGATTCACAAGTCCAAAACCT
JMSF034D05+           TTTTATGAACAAAAATGTACATTCCCAGTGATAACAAAGGGATTCACAAGTCCAAAACCT
                      ____________________________________________________________
consensus             TTTTATGAACAAAAATGTACATTCCCAGTGATAACAAAGGGATTCACAAGTCCAAAACCT
 
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JMFF028I13+           TCCCAATCAAGATGAGTCGAAATGGGGAAGAGTTAAAGAGGGAAAAACAAGTGACGTGTA
JMSF022A18+           TCCCAATCAAGATGAGTCGAAATGGGGAAGAGTTAAAGAGGGAAAAACAAGTGACGTGTA
JMSF034D05+           TCCCAATCAAGATGAGTCGAAATGGGGAAGAGTTAAAGAGGGAAAAACAAGTGACGTGTA
                      ____________________________________________________________
consensus             TCCCAATCAAGATGAGTCGAAATGGGGAAGAGTTAAAGAGGGAAAAACAAGTGACGTGTA
 
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JMFF028I13+           GAACAAC                                                     
JMSF022A18+           GAACAAC                                                     
JMSF034D05+           GAACAACAAATCAAAAAAGGTACAGTGAGTTTAAGTCTTTAAAGAGTTTTACTCCCTACA
                      ____________________________________________________________
consensus             GAACAACAAATCAAAAAAGGTACAGTGAGTTTAAGTCTTTAAAGAGTTTTACTCCCTACA
 
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JMSF034D05+           TGGCTACATATATATTGTCTTCTTTCCAAACCTTTTTTCTTTTTGACTCATCCCAAACTT
                      ____________________________________________________________
consensus             TGGCTACATATATATTGTCTTCTTTCCAAACCTTTTTTCTTTTTGACTCATCCCAAACTT
 
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JMSF034D05+           TGTCTCTCTCCTTCTCACGAGAGTGCCATGGTCAGCTGGACACACAAGCACTCACTGTCC
                      ____________________________________________________________
consensus             TGTCTCTCTCCTTCTCACGAGAGTGCCATGGTCAGCTGGACACACAAGCACTCACTGTCC