Contig 007958:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+                                         CCATTGAACATATTGTTCTCCAAGTTTAAA
JMSF033M08+                                                           TCCAAGTTTAAA
                      ____________________________________________________________
consensus                                           CCATTGAACATATTGTTCTCCAAGTTTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           TATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCCGACAATCGATTCACA
JMSF033M08+           TATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCCGACAATCGATTCACA
                      ____________________________________________________________
consensus             TATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCCGACAATCGATTCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           GTAACAGATATATATTCCAATTTCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAG
JMSF033M08+           GTAACAGATATATATTCCAATTTCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAG
                      ____________________________________________________________
consensus             GTAACAGATATATATTCCAATTTCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           TAGCTGCGGCTGATATCACTGCAGAGAAAAACACTAATAATCAATAAAGCAGAGAATATC
JMSF033M08+           TAGCTGCGGCTGATATCACTGCAGAGAAAAACACTAATAATCAATAAAGCAGAGAATATC
                      ____________________________________________________________
consensus             TAGCTGCGGCTGATATCACTGCAGAGAAAAACACTAATAATCAATAAAGCAGAGAATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           AATAAGAACTTAAGAAGTGGTGATTATTGCATAAATGTGGAAATTATAGGTTGGTACATT
JMSF033M08+           AATAAGAACTTAAGAAGTGGTGATTATTGCATAAATGTGGAAATTATAGGTTGGTACATT
                      ____________________________________________________________
consensus             AATAAGAACTTAAGAAGTGGTGATTATTGCATAAATGTGGAAATTATAGGTTGGTACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           ATCTTAAGAAATGGTAATTTCACCAAGGTAGGAGGAAGGACACCTTGCAGATCCTGTCCC
JMSF033M08+           ATCTTAAGAAATGGTAATTTCACCAAGGTAGGAGGAAGGACACCTTGCAGATCCTGTCCC
                      ____________________________________________________________
consensus             ATCTTAAGAAATGGTAATTTCACCAAGGTAGGAGGAAGGACACCTTGCAGATCCTGTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           TGCAAAATTATGCTTTGAACATGGCAAATACCAGCAGGGAAGCTACAATTGCAGGTGAGA
JMSF033M08+           TGCAAAATTATGCTTTGAACATGGCAAATACCAGCAGGGAAGCTACAATTGCAGGTGAGA
                      ____________________________________________________________
consensus             TGCAAAATTATGCTTTGAACATGGCAAATACCAGCAGGGAAGCTACAATTGCAGGTGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           GTATTATTGTAGGCAGGCATATCTTTCCTTTCTGGTGTGAACCAGTTTGAGTTGTTTTCA
JMSF033M08+           GTATTATTGTAGGCAGGCATATCTTTCCTTTCTGGTGTGAACCAGTTTGAGTTGTTTTCA
                      ____________________________________________________________
consensus             GTATTATTGTAGGCAGGCATATCTTTCCTTTCTGGTGTGAACCAGTTTGAGTTGTTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           CAAGGATTTACTCTAAAATCCCAATCTTTCTTCCCCACTTCATCTGCTATTTCCTTCAGT
JMSF033M08+           CAAGGATTTACTCTAAAATCCCAATCTTTCTTCCCCACTTCATCTGCTATTTCCTTCAGT
                      ____________________________________________________________
consensus             CAAGGATTTACTCTAAAATCCCAATCTTTCTTCCCCACTTCATCTGCTATTTCCTTCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           GCGTTTAATTCATCTAGAGGAAGATGCCCACTCTGCGCTTCAAGGAATCTTGCATTGAAG
JMSF033M08+           GCGTTTAATTCATCTAGAGGAAGATGCCCACTCTGCGCTTCAAGGAATCTTGCATTGAAG
                      ____________________________________________________________
consensus             GCGTTTAATTCATCTAGAGGAAGATGCCCACTCTGCGCTTCAAGGAATCTTGCATTGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           GAGAGTAGTATAATTGGTATGAGGATTATGAACATGGAGGCTGACATGGTTGAATGCTTG
JMSF033M08+           GAGAGTAGTATAATTGGTATGAGGATTATGAACATGGAGGCTGACATGGTTGAATGCTTG
                      ____________________________________________________________
consensus             GAGAGTAGTATAATTGGTATGAGGATTATGAACATGGAGGCTGACATGGTTGAATGCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O03+           GGATTGGAAGATGAAGATCTGCTAGCTGCATTATTTTGCTT                   
JMSF033M08+           GGATTGGAAGATGAAGATCTGCTAGCTGCATTATTTTGCTTGCATTGAATAGTCCAGTTC
                      ____________________________________________________________
consensus             GGATTGGAAGATGAAGATCTGCTAGCTGCATTATTTTGCTTGCATTGAATAGTCCAGTTC