Contig 007955:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033J13Sequence645007955 (2)ref|XP_009591326.1|5e-46PREDICTED: autophagy protein 5-like [Nicotiana tomentosiformis]729020444ref|XP_006350461.1|1e-68PREDICTED: autophagy protein 5-like [Solanum tuberosum]
JMSF052H09Sequence641007955 (2)ref|XP_009591326.1|4e-46PREDICTED: autophagy protein 5-like [Nicotiana tomentosiformis]903021620ref|XP_004231625.1|5e-28PREDICTED: autophagy protein 5 [Solanum lycopersicum] ref|XP_010315708.1| PREDIC

Alignment

This contig is upended


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JMSF052H09+                      TTTGCACTGTACAACCTGAATTACAAATTCCTATTCTGGCTATTCAAAA
JMSF033J13+                          CACTGTACAACCTGAATTACAAATTCCTATTCTGGCTATTCAAAA
                      ____________________________________________________________
consensus                        TTTGCACTGTACAACCTGAATTACAAATTCCTATTCTGGCTATTCAAAA
 
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JMSF052H09+           TGAGCATTAGATGATGTATAAAAATCTTAATAGTAAACACAGTATTGAGGTTTTCAGGTT
JMSF033J13+           TGAGCATTAGATGATGTATAAAAATCTTAATAGTAAACACAGTATTGAGGTTTTCAGGTT
                      ____________________________________________________________
consensus             TGAGCATTAGATGATGTATAAAAATCTTAATAGTAAACACAGTATTGAGGTTTTCAGGTT
 
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JMSF052H09+           TCTCATAATTTCAAGAAAATAGCAAAGTCAAT-AATCAACCCCAAGAAAATACCGTTAGA
JMSF033J13+           TCTCATAATTTCAAGAAAATAGCAAAGTCAATAAATCAACCCCAAGAAAATACCGTTAGA
                      ____________________________________________________________
consensus             TCTCATAATTTCAAGAAAATAGCAAAGTCAATAAATCAACCCCAAGAAAATACCGTTAGA
 
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JMSF052H09+           TTCCATGGTCTTTCTGGTTCTGCACACAGAAGATCAAAGAGTACCCCAATAGGTATATAC
JMSF033J13+           TTCCATGGTCTTTCTGGTTCTGCACACAGAAGATCAAAGAGTACCCCAATAGGTATATAC
                      ____________________________________________________________
consensus             TTCCATGGTCTTTCTGGTTCTGCACACAGAAGATCAAAGAGTACCCCAATAGGTATATAC
 
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JMSF052H09+           CATTTCAGAGGAAGTCCTTTGTACTCAAACCAAATAGTGTCCACACCCGGGGGAAGTGTA
JMSF033J13+           CATTTCAGAGGAAGTCCTTTGTACTCAAACCAAATAGTGTCCACACCCGGGGGAAGTGTA
                      ____________________________________________________________
consensus             CATTTCAGAGGAAGTCCTTTGTACTCAAACCAAATAGTGTCCACACCCGGGGGAAGTGTA
 
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JMSF052H09+           CCACTGAAGAAAGGTTTAACTTGTGGGGCTAACAGAGGCAGATACCCTATTCGAGGAGCT
JMSF033J13+           CCACTGAAGAAAGGTTTAACTTGTGGGGCTAACAGAGGCAGATACCCTATTCGAGGAGCT
                      ____________________________________________________________
consensus             CCACTGAAGAAAGGTTTAACTTGTGGGGCTAACAGAGGCAGATACCCTATTCGAGGAGCT
 
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JMSF052H09+           AGAATGAGAGCAGGGGGAGGCAGAGGGAGAGTGGTGACTTCGGATTCGTGAAGATGAATC
JMSF033J13+           AGAATGAGAGCAGGGGGAGGCAGAGGGAGAGTGGTGACTTCGGATTCGTGAAGATGAATC
                      ____________________________________________________________
consensus             AGAATGAGAGCAGGGGGAGGCAGAGGGAGAGTGGTGACTTCGGATTCGTGAAGATGAATC
 
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JMSF052H09+           TGTAGTGGAATTGCTCCTTCCCAAACATACTTCTGTGCTTCTGTGCCTTTACTGATTTCC
JMSF033J13+           TGTAGTGGAATTGCTCCTTCCCAAACATACTTCTGTGCTTCTGTGCCTTTACTGATTTCC
                      ____________________________________________________________
consensus             TGTAGTGGAATTGCTCCTTCCCAAACATACTTCTGTGCTTCTGTGCCTTTACTGATTTCC
 
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JMSF052H09+           ATTGTTTATGAGCTAAAAGCCTTAAAACTGAGCAACAATTAGCGCCAGGCACAATGCTCA
JMSF033J13+           ATTGTTTATGAGCTAAAAGCCTTAAAACTGAGCAACAATTAGCGCCAGGCACAATGCTCA
                      ____________________________________________________________
consensus             ATTGTTTATGAGCTAAAAGCCTTAAAACTGAGCAACAATTAGCGCCAGGCACAATGCTCA
 
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JMSF052H09+           AGACTCAAAGACTCGAAAGATTCCCCAAACTCTCTCTGTCTTTTCTCTTTCCTTTGCTTC
JMSF033J13+           AGACTCAAAGACTCGAAAGATTCCCCAAACTCTCTCTGTCTTTTCTCTTTCCTTTGCTTC
                      ____________________________________________________________
consensus             AGACTCAAAGACTCGAAAGATTCCCCAAACTCTCTCTGTCTTTTCTCTTTCCTTTGCTTC
 
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JMSF052H09+           GGAGATCAAAGGTTTCGTGAGGTGGAAGAGAAGATCGATTGAATAATGGGCC        
JMSF033J13+           GGAGATCAAAGGTTTCGTGAGGTGGAAGAGAAGATCGATTGAATAATGGGCCGTCTTTCC
                      ____________________________________________________________
consensus             GGAGATCAAAGGTTTCGTGAGGTGGAAGAGAAGATCGATTGAATAATGGGCCGTCTTTCC