Contig 007949:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032P24Sequence642007949 (2)ref|XP_002514629.1|1e-84Protein COBRA precursor, putative [Ricinus communis] gb|EEF47735.1| Protein COBR650007949 (2)ref|XP_011099166.1|1e-68PREDICTED: protein COBRA-like [Sesamum indicum]

Alignment

This contig is upended


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rJMSF032P24-                         AAATCCACAATCGTTGCAGTAGTGAGTTTATTTCAGCCAACAGGC
                      ____________________________________________________________
consensus                            AAATCCACAATCGTTGCAGTAGTGAGTTTATTTCAGCCAACAGGC
 
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rJMSF032P24-          CACAAGCGATTAAGCAAATTCATAATTCTCAATAGAACAGAGTAGAACTGAACTGAAGTG
                      ____________________________________________________________
consensus             CACAAGCGATTAAGCAAATTCATAATTCTCAATAGAACAGAGTAGAACTGAACTGAAGTG
 
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rJMSF032P24-          CACAAAACTACGAGGCTTCTTCCTGAGCATTTTGTTTTGAAATTAGAGGATGAGGAGGGG
                      ____________________________________________________________
consensus             CACAAAACTACGAGGCTTCTTCCTGAGCATTTTGTTTTGAAATTAGAGGATGAGGAGGGG
 
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rJMSF032P24-          CATATTATGCCACTTTTGGAGATTTGTTCAAGTACAAGCAACTCAGCTTCCATGTCATCA
                      ____________________________________________________________
consensus             CATATTATGCCACTTTTGGAGATTTGTTCAAGTACAAGCAACTCAGCTTCCATGTCATCA
 
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rJMSF032P24-          TAGCCTGTGTCACTCTTCTCCCATCTGGGGTCACAAATCTTGTAGGCCTCACGATTTTGG
JMSF032P24+                             TCCCATCTGGGGTCACAAATCTTGTAGGCCTCACGATTTTGG
                      ____________________________________________________________
consensus             TAGCCTGTGTCACTCTTCTCCCATCTGGGGTCACAAATCTTGTAGGCCTCACGATTTTGG
 
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rJMSF032P24-          CGGCTCCACAAGCATATCCTCCGCCGCTCCCCGGCGCTTCAAAGGTGAAATTCTTGGGTA
JMSF032P24+           CGGCTCCACAAGCATATCCTCCGCCGCTCCCCGGCGCTTCAAAGGTGAAATTCTTGGGTA
                      ____________________________________________________________
consensus             CGGCTCCACAAGCATATCCTCCGCCGCTCCCCGGCGCTTCAAAGGTGAAATTCTTGGGTA
 
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rJMSF032P24-          GCCTGACTGTTTTATTGGTGGTTCCAGCTTCCCCAACAGAGAGTTGGAATTTACTCACGG
JMSF032P24+           GCCTGACTGTTTTATTGGTGGTTCCAGCTTCCCCAACAGAGAGTTGGAATTTACTCACGG
                      ____________________________________________________________
consensus             GCCTGACTGTTTTATTGGTGGTTCCAGCTTCCCCAACAGAGAGTTGGAATTTACTCACGG
 
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rJMSF032P24-          CGGCTCTAGATCCCTTCTTGCCCCACGAGCTAAGCACCCCTCCTTTGCAGCAGTTTTCTA
JMSF032P24+           CGGCTCTAGATCCCTTCTTGCCCCACGAGCTAAGCACCCCTCCTTTGCAGCAGTTTTCTA
                      ____________________________________________________________
consensus             CGGCTCTAGATCCCTTCTTGCCCCACGAGCTAAGCACCCCTCCTTTGCAGCAGTTTTCTA
 
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rJMSF032P24-          CTTGCTGATTGTAGGGAGTACCGGGCAGCAAGTCCACAACCTCCGGAGCCCTCCGACAAG
JMSF032P24+           CTTGCTGATTGTAGGGAGTACCGGGCAGCAAGTCCACAACCTCCGGAGCCCTCCGACAAG
                      ____________________________________________________________
consensus             CTTGCTGATTGTAGGGAGTACCGGGCAGCAAGTCCACAACCTCCGGAGCCCTCCGACAAG
 
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rJMSF032P24-          AATGTGGGATGTTTCCTTTGAATCTGGAACAATCTCCTTGCTCTGNTGTTTGAGCTCCCA
JMSF032P24+           AATGTGGGATGTTTCCTTTGAATCTGGAACAATCTCCTTGCTCTGTTGTTTGAGCTCCCA
                      ____________________________________________________________
consensus             AATGTGGGATGTTTCCTTTGAATCTGGAACAATCTCCTTGCTCTGTTGTTTGAGCTCCCA
 
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rJMSF032P24-          TCATGCTCCATATCACCTCGTACTTTGCCCATCTCCATCCCAATGTC             
JMSF032P24+           TCATGCTCCATATCACCTCGTACTTTGCCCATCTCCATCCCAATGTCCAACCTGGTTCTC
                      ____________________________________________________________
consensus             TCATGCTCCATATCACCTCGTACTTTGCCCATCTCCATCCCAATGTCCAACCTGGTTCTC
 
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JMSF032P24+           GGATTTTCCTCGACTTCTGATAGTTGTATATGGTCACAACCGCAACGTATCCATCGGGTG
                      ____________________________________________________________
consensus             GGATTTTCCTCGACTTCTGATAGTTGTATATGGTCACAACCGCAACGTATCCATCGGGTG
 
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JMSF032P24+           TCCAGGAGATGACATCCCAGTTTATGGTGATGTTTCCACCATGGTTAAGATCATGACTGG
                      ____________________________________________________________
consensus             TCCAGGAGATGACATCCCAGTTTATGGTGATGTTTCCACCATGGTTAAGATCATGACTGG
 
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JMSF032P24+           CAGCATAATTACTAGCAGATGAGAAGCTGAAGCAGCAACTGAAGAAGGCCAGCACTAGCA
                      ____________________________________________________________
consensus             CAGCATAATTACTAGCAGATGAGAAGCTGAAGCAGCAACTGAAGAAGGCCAGCACTAGCA
 
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JMSF032P24+           GTAGTAGTATTGACCTGGAAAAGCCCATCTCCAAAATTAGAAGAATGGAATTGAAATACC
                      ____________________________________________________________
consensus             GTAGTAGTATTGACCTGGAAAAGCCCATCTCCAAAATTAGAAGAATGGAATTGAAATACC