| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021H06 | Sequence | 527 | 007948 (8) | ref|XP_004249928.1| | 2e-28 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanu | 662 | 004012 (6) | ref|XP_009625603.1| | 8e-51 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform |
| JMFF037C04 | Sequence | 614 | 007948 (8) | 706 | 004012 (6) | ref|XP_011101933.1| | 3e-99 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform | |||
| JMFF041P08 | Sequence | 642 | 007948 (8) | 602 | 004012 (6) | ref|XP_011101933.1| | 3e-79 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform | |||
| JMFS102B09 | Sequence | 620 | 007948 (8) | ||||||||
| JMSF004D21 | Sequence | 257 | 007948 (8) | ||||||||
| JMSF022I24 | Sequence | 674 | 007948 (8) | ref|XP_004249928.1| | 9e-18 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanu | 762 | 004012 (6) | ref|XP_011079001.1| | 1e-111 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform |
| JMSF032O03 | Sequence | 639 | 007948 (8) | 734 | 004012 (6) | ref|XP_011079001.1| | 1e-107 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform | |||
| JMSF038M07 | Sequence | 666 | 007948 (8) | ref|XP_004249928.1| | 2e-62 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanu | 909 | 004012 (6) | ref|XP_009625603.1| | 5e-99 | PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform |
This contig is upended
. : . : . : . : . : . :
JMSF038M07+ AACTTAGGAAGCGGAATGGCAG
____________________________________________________________
consensus AACTTAGGAAGCGGAATGGCAG
. : . : . : . : . : . :
JMSF038M07+ ATTTAGAAAAGTGGACCTTTTGAAGATATTTGTCCTGGATTATCCGGATTGTTGAGGCTT
____________________________________________________________
consensus ATTTAGAAAAGTGGACCTTTTGAAGATATTTGTCCTGGATTATCCGGATTGTTGAGGCTT
. : . : . : . : . : . :
JMSF038M07+ TAGGCTCACAGTCCACCCCTTGCTGCTCCAACTTTTCAATTGTGGCAGCATCAACATGCT
____________________________________________________________
consensus TAGGCTCACAGTCCACCCCTTGCTGCTCCAACTTTTCAATTGTGGCAGCATCAACATGCT
. : . : . : . : . : . :
JMSF038M07+ CAATCTCAATCGTCAACACATCACACCTTTTTCCAAATTCTTCAACAGTGGCACTATCAT
JMFF021H06+ GTCAACACATCACACCTTTTTCCAAATTCTTCAACAGTGGCACTATCAT
JMSF022I24+ AT
____________________________________________________________
consensus CAATCTCAATCGTCAACACATCACACCTTTTTCCAAATTCTTCAACAGTGGCACTATCAT
. : . : . : . : . : . :
JMSF038M07+ CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
JMFF021H06+ CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
JMSF022I24+ CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
____________________________________________________________
consensus CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
. : . : . : . : . : . :
JMSF038M07+ CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
JMFF021H06+ CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
JMSF022I24+ CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
____________________________________________________________
consensus CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
. : . : . : . : . : . :
JMSF038M07+ GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
JMFF021H06+ GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
JMSF022I24+ GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
JMFS102B09+ TGAAACACTGC
JMFF041P08+ GGTGAAACACTGC
____________________________________________________________
consensus GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
. : . : . : . : . : . :
JMSF038M07+ TCCTGTCCGATGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAACGGCGG
JMFF021H06+ TCCTGTCCGATGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAACGGCGG
JMSF022I24+ TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMFS102B09+ TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMFF041P08+ TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMFF037C04+ CTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMSF032O03+ TCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
____________________________________________________________
consensus TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
. : . : . : . : . : . :
JMSF038M07+ AGCTACATTGCGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFF021H06+ AGCTACATTGCGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMSF022I24+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFS102B09+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFF041P08+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFF037C04+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMSF032O03+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
____________________________________________________________
consensus AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
. : . : . : . : . : . :
JMSF038M07+ TTAAGGTGCGTTGAGGCTTAGAATTAAGAACACCTCCAAA-GATGGAACTTTTACAGGGA
JMFF021H06+ CTAAGGTGCGTTGAGGCTTAGAATTAAGAACACCTCCAAA-GATGGAACTTTTACAGGGA
JMSF022I24+ TTAAGGTGTGTTGAGGCTTAGAATTAAG-ACACCTACAAA-GATGGAACTTTTACAGGGA
JMFS102B09+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
JMFF041P08+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
JMFF037C04+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAAGGATGGAACTTTTACAGGGA
JMSF032O03+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
____________________________________________________________
consensus TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
. : . : . : . : . : . :
JMSF038M07+ GCTGAGCTGATTCTGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFF021H06+ GCTGAGCTGATTCTGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMSF022I24+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFS102B09+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFF041P08+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFF037C04+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMSF032O03+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
____________________________________________________________
consensus GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
. : . : . : . : . : . :
JMSF038M07+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATT
JMFF021H06+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATT
JMSF022I24+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMFS102B09+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMFF041P08+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMFF037C04+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMSF032O03+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
____________________________________________________________
consensus CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
. : . : . : . : . : . :
JMSF022I24+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMFS102B09+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMFF041P08+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMFF037C04+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMSF032O03+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
____________________________________________________________
consensus AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
. : . : . : . : . : . :
JMSF022I24+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMFS102B09+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMFF041P08+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMFF037C04+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMSF004D21+ GTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMSF032O03+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
____________________________________________________________
consensus CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
. : . : . : . : . : . :
JMSF022I24+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMFS102B09+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMFF041P08+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMFF037C04+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMSF004D21+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCANTGAGGCGGTAGGCGGCGAGTGGTGGNCCG
JMSF032O03+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
____________________________________________________________
consensus TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
. : . : . : . : . : . :
JMSF022I24+ GTGTCTCCTTGACT
JMFS102B09+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMFF041P08+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMFF037C04+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMSF004D21+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMSF032O03+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
____________________________________________________________
consensus GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
. : . : . : . : . : . :
JMFS102B09+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
JMFF041P08+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
JMFF037C04+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
JMSF004D21+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTNGGCGTCTGAGGATGTGAGGANCAAG
JMSF032O03+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
____________________________________________________________
consensus AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
. : . : . : . : . : . :
JMFS102B09+ AGCAGAGGGC
JMFF041P08+ AGCAGAGGGCGTGAGGGAGTGGGGCGGTGA
JMFF037C04+ AGCAGAGGGCGTGAGGGAGTGGGGCGGTGA
JMSF004D21+ AGCAGAGGGCNTGAGGGAGTGG
JMSF032O03+ AGCAGAGGGCGTGAGGGAGTGGGGCGGTGAGAGACGAGGGCGGAATCCGGCGGAAGAGTC
____________________________________________________________
consensus AGCAGAGGGCGTGAGGGAGTGGGGCGGTGAGAGACGAGGGCGGAATCCGGCGGAAGAGTC