Contig 007947:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS165G11+                                       GTAGACTTTTGGAATAGCTCCATGCACTATCT
                      ____________________________________________________________
consensus                                         GTAGACTTTTGGAATAGCTCCATGCACTATCT
 
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JMFS165G11+           GTAGCAAATATTCAGCTCCTGCACACAGATTCGATAAAGAATTTGATAATCCTAGGAGGG
                      ____________________________________________________________
consensus             GTAGCAAATATTCAGCTCCTGCACACAGATTCGATAAAGAATTTGATAATCCTAGGAGGG
 
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JMFS165G11+           TTGGAGAAGTTCCACTGTTTGTGTTGCTTATCTTACTCTCCTCTTGCAAAGCAACATCCC
JMFS023F08+                                    GCTTATCTTACTCTCCTCTGNCAAAGCAACATCCC
                      ____________________________________________________________
consensus             TTGGAGAAGTTCCACTGTTTGTGTTGCTTATCTTACTCTCCTCTTGCAAAGCAACATCCC
 
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JMFS165G11+           GTAGCCTTCTAAGCCATGTAGAGATAGAGCATAGAAATGCCCTCAAAGTGGGTGGAGGAG
JMFS023F08+           GTAGCCTTCTAAGCCATGTAGAGATAGAGCATAGAAATGCCCTCAAAGTGGGTGGAGGAG
                      ____________________________________________________________
consensus             GTAGCCTTCTAAGCCATGTAGAGATAGAGCATAGAAATGCCCTCAAAGTGGGTGGAGGAG
 
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JMFS165G11+           CTCTCACAGATTTCTCAACCTTATTGACTATGATTTCTACTAGTTTTAAGCATGCTGCTG
JMFS023F08+           CTCTCACAGATTTCTCAACCTTATTGACTATGATTTCTACTAGTTTTAAGCATGCTGCTG
JMSF032N10+              TCACAGATTTCTCAACCTTATTGACTATGATTTCTACTAGTTTTAAGCATGCTGCTG
                      ____________________________________________________________
consensus             CTCTCACAGATTTCTCAACCTTATTGACTATGATTTCTACTAGTTTTAAGCATGCTGCTG
 
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JMFS165G11+           CATAAGTAAACTGATCGAGAATGAGATAAAGACTTGTCTGCGAAAGGTGGGAAACATATA
JMFS023F08+           CATAAGTAAACTGATCGAGAATGAGATAAAGACTTGTCTGCGAAAGGTGGGAAACATATA
JMSF032N10+           CATAAGTAAACTGATCGAGAATGAGATAAAGACTTGTCTGCGAAAGGTGGGAAACATATN
                      ____________________________________________________________
consensus             CATAAGTAAACTGATCGAGAATGAGATAAAGACTTGTCTGCGAAAGGTGGGAAACATATA
 
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JMFS165G11+           TCCCCTTTTTGGCACAAAATCGTTCTCCAGTATCATCCCAATAAAATAAAGAGCTGGAGA
JMFS023F08+           TCCCCTTTTTGGCACAAAATCGTTCTCCAGTATCATCCCAATAAAATAAAGAGCTGGAGA
JMSF032N10+           TCCCCTTTTTGGCNCAAAATCGTTNTCCNGTNTCATCCCAATAAAATAAAGNGCTGGNGA
                      ____________________________________________________________
consensus             TCCCCTTTTTGGCACAAAATCGTTCTCCAGTATCATCCCAATAAAATAAAGAGCTGGAGA
 
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JMFS165G11+           AACCCTGTAATATCTGCAACACTCCTCGCACTAGATCAACTTCATTTGTCCTAAGGGATG
JMFS023F08+           AACCCTGTAATATCTGCAAAACTCCTCGCACTAGATCAACTTCATTTGTCCTAAGGGATG
JMSF032N10+           AACCCTGTAATNTTTGCAACNCTCCTCGCNCTAGATCAACTTCATTTGTCCTAAGGGATG
                      ____________________________________________________________
consensus             AACCCTGTAATATCTGCAACACTCCTCGCACTAGATCAACTTCATTTGTCCTAAGGGATG
 
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JMFS165G11+           AGATTGGCTGCACAAAATGTAATCCACCAGAAAAGGAGCTATAAA-TTTTTTCTATCAAA
JMFS023F08+           AGATTGGCTGCACAAAATGTAATCCACCAGAAAAGGAGCTATAAA-TTTTTTCTATCAAA
JMSF032N10+           NGATTGGCTGCNCAAAATGTAATCCCCCNGAAAAGGNGCTATAAATTTTTTTTTATCAAA
                      ____________________________________________________________
consensus             AGATTGGCTGCACAAAATGTAATCCACCAGAAAAGGAGCTATAAA-TTTTTTCTATCAAA
 
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JMFS165G11+           CTTGTAGAGGCTTCCATGTTTTCCACGGATGGAGTTAGTAGCTAAAAGTGAAAAC     
JMFS023F08+           CTTGTAGAGGCTTCCATGTTTTCCACGGATGGAGTTAGTAGCTAAAAGTGAAAAC     
JMSF032N10+           CTTGTAGNGGNTTCCATGTTTTCCNCGGATGGAGTTAGTAGCTAAAAGNGAAAACAATTT
                      ____________________________________________________________
consensus             CTTGTAGAGGCTTCCATGTTTTCCACGGATGGAGTTAGTAGCTAAAAGTGAAAACAATTT
 
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JMSF032N10+           TATCAAGCAACTGGNGGGCCCAAAAGAAGAAAAATAAGATTTTTTTTTTTCCAAACCATT
                      ____________________________________________________________
consensus             TATCAAGCAACTGGNGGGCCCAAAAGAAGAAAAATAAGATTTTTTTTTTTCCAAACCATT
 
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JMSF032N10+           AGACAAATGCGTCNTAAGANCTGCAGNTATTAGAAGACACACAACTCAAAATAGCCTCCA
                      ____________________________________________________________
consensus             AGACAAATGCGTCNTAAGANCTGCAGNTATTAGAAGACACACAACTCAAAATAGCCTCCA
 
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JMSF032N10+           ATAACCAAAAACACACACACACAAACATTCAGCTGAATTTAAATTTAAAACAAAAAATAA
                      ____________________________________________________________
consensus             ATAACCAAAAACACACACACACAAACATTCAGCTGAATTTAAATTTAAAACAAAAAATAA
 
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JMSF032N10+           ATAAATAAAATCAAACTTTGTACAGAAATTCTTNTAATATTTCATAATTAACAGGACACC
                      ____________________________________________________________
consensus             ATAAATAAAATCAAACTTTGTACAGAAATTCTTNTAATATTTCATAATTAACAGGACACC