Contig 007946:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038B15Sequence447007946 (3)ref|XP_009613467.1|4e-29PREDICTED: uncharacterized protein LOC104106594 isoform X4 [Nicotiana tomentosi693007946 (3)ref|XP_006364300.1|2e-18PREDICTED: coiled-coil domain-containing protein 18-like [Solanum tuberosum]
JMSF032G08Sequence713007946 (3)ref|XP_009613467.1|1e-52PREDICTED: uncharacterized protein LOC104106594 isoform X4 [Nicotiana tomentosi742019360ref|XP_009803291.1|119PREDICTED: uncharacterized protein LOC104248689, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF038B15-                                       TGGTTTGATCATGAATAGTAAGTAGGACATA
                      ____________________________________________________________
consensus                                          TGGTTTGATCATGAATAGTAAGTAGGACATA
 
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rJMFF038B15-          TAAAATGAGACAGATGGAGTATATTGTAATGATTCCTAGTCGAACAAAATACTATACTGT
                      ____________________________________________________________
consensus             TAAAATGAGACAGATGGAGTATATTGTAATGATTCCTAGTCGAACAAAATACTATACTGT
 
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rJMFF038B15-          AACATCATAGTGAGAAGAAAAAGAATATAAGCAATAGGCAAGAAGCTAGAAGAGTTGGGC
                      ____________________________________________________________
consensus             AACATCATAGTGAGAAGAAAAAGAATATAAGCAATAGGCAAGAAGCTAGAAGAGTTGGGC
 
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rJMFF038B15-          ATTGTTTAATCGAACCAAACCTTTATGTTCAACTTCAGCTTTGCAGGGATCATATAACCA
                      ____________________________________________________________
consensus             ATTGTTTAATCGAACCAAACCTTTATGTTCAACTTCAGCTTTGCAGGGATCATATAACCA
 
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rJMFF038B15-          GTGGCACCATCTGCTGATTCAATCCACAATGCACTTGTCTTCAAATGCTTTGCAGTTTGG
                      ____________________________________________________________
consensus             GTGGCACCATCTGCTGATTCAATCCACAATGCACTTGTCTTCAAATGCTTTGCAGTTTGG
 
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rJMFF038B15-          TATACCCTCGACGACCATCAAAGCTTCGTTCGTTAAGCATTCAAATGGGAATACCAGTAC
                      ____________________________________________________________
consensus             TATACCCTCGACGACCATCAAAGCTTCGTTCGTTAAGCATTCAAATGGGAATACCAGTAC
 
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rJMFF038B15-          ACTGCATCTTCGCCTCGGGAAAATTTGCCAATGTGCAGCTAGTTCAAGTGTGATATGAGA
                      ____________________________________________________________
consensus             ACTGCATCTTCGCCTCGGGAAAATTTGCCAATGTGCAGCTAGTTCAAGTGTGATATGAGA
 
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rJMFF038B15-          AAGGTCAAAGCGCCTAATACTGGAAACACTACTAGAGCTGAAGCCACCAAGAATACTAAT
                      ____________________________________________________________
consensus             AAGGTCAAAGCGCCTAATACTGGAAACACTACTAGAGCTGAAGCCACCAAGAATACTAAT
 
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rJMFF038B15-          TCATCATTAGCAAGCACTGTCGGGAAATCATACTGTTCCACAGCCTGCTTCAGAAAGCCT
                      ____________________________________________________________
consensus             TCATCATTAGCAAGCACTGTCGGGAAATCATACTGTTCCACAGCCTGCTTCAGAAAGCCT
 
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rJMFF038B15-          TGCAACTGATGATGATGAAGTTTTATGGCTGCAAAGGTTTTTTCGAACTGATGCAAAGCT
                      ____________________________________________________________
consensus             TGCAACTGATGATGATGAAGTTTTATGGCTGCAAAGGTTTTTTCGAACTGATGCAAAGCT
 
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rJMFF038B15-          TTTGACATGTAGGAATTCTGGTCAGACGTACTGTTGGACCTCAGAAGACCCTTCAACATC
JMSF032G08+                  TGTAGGAATTCTGGTCAGACGTACTGTTGGACNTCAGAAGACCCTTCAACATC
                      ____________________________________________________________
consensus             TTTGACATGTAGGAATTCTGGTCAGACGTACTGTTGGACCTCAGAAGACCCTTCAACATC
 
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rJMFF038B15-          TCAATATGGTGGCTGGAAAGATTTTTGATAGACTTCACAAATGGACATCTGCCATATCTT
JMSF032G08+           TCAATATGGTGGCTGGAAAGATTTTTGATAGACTTCACAAATGGACATCTGCCATATCTT
                      ____________________________________________________________
consensus             TCAATATGGTGGCTGGAAAGATTTTTGATAGACTTCACAAATGGACATCTGCCATATCTT
 
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rJMFF038B15-          AG                                                          
JMSF032G08+           AGTTGTGATTTCACCTTCAATACTCTAATCTCTGCCAATTGAGCAGCCTGCTCAAGTTGC
                      ____________________________________________________________
consensus             AGTTGTGATTTCACCTTCAATACTCTAATCTCTGCCAATTGAGCAGCCTGCTCAAGTTGC
 
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JMSF032G08+           TGTACTTGAATCCACTGTTCATTTACAATTGCAGCTGCCTTCTCAACTTTGGAAGCAACA
                      ____________________________________________________________
consensus             TGTACTTGAATCCACTGTTCATTTACAATTGCAGCTGCCTTCTCAACTTTGGAAGCAACA
 
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JMFF038B15+                         CTCAGATTCTTGTGCATCGAGTGTTAGTTTATGAATTTCAAAGTTG
JMSF032G08+           TCTTTTAACCTTTCCTCAGATTCTTGTGCATCGAGTGTTAGTTTATGAATTTCAAAGTTG
                      ____________________________________________________________
consensus             TCTTTTAACCTTTCCTCAGATTCTTGTGCATCGAGTGTTAGTTTATGAATTTCAAAGTTG
 
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JMFF038B15+           TTCTCTCTTGATGTAGCCCAGAGCAATTGAACCTCCTCTTCTAGAAGAGTAAGCCTTTGA
JMSF032G08+           TTCTCTCTTGATGTAGCCCAGAGCAATTGAACCTCCTCTTCTAGAAGAGTAAGCCTTTGA
                      ____________________________________________________________
consensus             TTCTCTCTTGATGTAGCCCAGAGCAATTGAACCTCCTCTTCTAGAAGAGTAAGCCTTTGA
 
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JMFF038B15+           TTCTCATTTGATTCTTGGTCCTTAAAGCTTGACAAAGCAGTTTTTAGGCGGTCGATGTCA
JMSF032G08+           TTCTCATTTGATTCTTGGTCCTTAAAGCTTGACAAAGCAGTTTTTAGGCGGTCGATGTCA
                      ____________________________________________________________
consensus             TTCTCATTTGATTCTTGGTCCTTAAAGCTTGACAAAGCAGTTTTTAGGCGGTCGATGTCA
 
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JMFF038B15+           AAGCTAATTTCTTCAAGTTTCTTCTCGATTCCCTCTATGTATTGGCATTTAGCATTTAAA
JMSF032G08+           AAGCTAATTTCTTCAAGTTTCTTCTCGATTCCCTCTATGTATTGGCATTTAGCATTTAAA
                      ____________________________________________________________
consensus             AAGCTAATTTCTTCAAGTTTCTTCTCGATTCCCTCTATGTATTGGCATTTAGCATTTAAA
 
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JMFF038B15+           CTGTCGTCGTATTCCTCCAATGTGGATTCTAAACGGGAGAGTTTGAGCTTGGCATCTTGC
JMSF032G08+           CTGTCGTCGTATTCCTCCAATGTGGATTCTAAACGGGAGAGTTTGAGCTTGGCATCTTGC
                      ____________________________________________________________
consensus             CTGTCGTCGTATTCCTCCAATGTGGATTCTAAACGGGAGAGTTTGAGCTTGGCATCTTGC
 
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JMFF038B15+           AGTTGGGTACGGAGAGAGATGTGGATCGGCGTCTGAGAGTCTCCGAGGACAGCGTTGGAG
JMSF032G08+           AGTTGGGTACGGAGAGAGATGTGGATCGGCGTCTGAGAGTCTCCGAGGACAGCGTTGGAG
                      ____________________________________________________________
consensus             AGTTGGGTACGGAGAGAGATGTGGATCGGCGTCTGAGAGTCTCCGAGGACAGCGTTGGAG
 
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JMFF038B15+           TGGAGGGCGCAGAAGAGAGCTGTAAAAATGGTGGGAACCAAAATTAACGAGATTGCCATT
JMSF032G08+           TGGAGGGCGCAGAAGAGAGCTGTAAAAATGGTGGGAACCAAAATTAACGAGATTGCCATT
                      ____________________________________________________________
consensus             TGGAGGGCGCAGAAGAGAGCTGTAAAAATGGTGGGAACCAAAATTAACGAGATTGCCATT
 
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JMFF038B15+           TCCAAGCCTTTCTTCTCTCAACCCTTCAGCACTGGACTTCC                   
JMSF032G08+           TCCAAGCCTTTCTTCTCTCAACCCTTCAGCACTGGACTTCCATTTTCACTTTTCAGCACC
                      ____________________________________________________________
consensus             TCCAAGCCTTTCTTCTCTCAACCCTTCAGCACTGGACTTCCATTTTCACTTTTCAGCACC