Contig 007943:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009P15Sequence188007943 (2)emb|CDP06260.1|7e-05unnamed protein product [Coffea canephora]803019237ref|XP_010319615.1|5e-123PREDICTED: protein kinase and PP2C-like domain-containing protein isoform X2 [S
JMSF031N18Sequence644007943 (2)gb|EYU18588.1|2e-75hypothetical protein MIMGU_mgv1a002771mg [Erythranthe guttata]581019357ref|XP_006482024.1|9e-23PREDICTED: protein kinase and PP2C-like domain-containing protein-like isoform

Alignment

This contig is upended


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JMSF031N18+                           GAAGCGGACATGAAATCAAGAGTTTTACTAATTTAAACGTGAAT
                      ____________________________________________________________
consensus                             GAAGCGGACATGAAATCAAGAGTTTTACTAATTTAAACGTGAAT
 
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JMSF031N18+           GCACATGGTGAGGATCATCAAAGACATTACTAGAATATTTGCGGGTTTCACATCCCTGTG
                      ____________________________________________________________
consensus             GCACATGGTGAGGATCATCAAAGACATTACTAGAATATTTGCGGGTTTCACATCCCTGTG
 
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JMSF031N18+           GACAATCCCTAGGGTGTGCAGATATTGCAGAGCCTTTGCTAGCTTAGACGAGACATCAAG
                      ____________________________________________________________
consensus             GACAATCCCTAGGGTGTGCAGATATTGCAGAGCCTTTGCTAGCTTAGACGAGACATCAAG
 
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JMSF031N18+           CACCTTATGAATGCTTGGACTCCATTCCTCCACGTGCAACTGGGCAGCGAGATTACCGAG
                      ____________________________________________________________
consensus             CACCTTATGAATGCTTGGACTCCATTCCTCCACGTGCAACTGGGCAGCGAGATTACCGAG
 
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JMSF031N18+           CTCGTAGAACTCGAAGAAAAACATATAGTTGGGAGGCTTGGCATGCGCTGCCACTAGCTT
                      ____________________________________________________________
consensus             CTCGTAGAACTCGAAGAAAAACATATAGTTGGGAGGCTTGGCATGCGCTGCCACTAGCTT
 
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JMSF031N18+           CGCGATCCCCGGATGATCCAACATGCAGAGTAATTGCAATTCCTTGTGGAATTTATCCAA
                      ____________________________________________________________
consensus             CGCGATCCCCGGATGATCCAACATGCAGAGTAATTGCAATTCCTTGTGGAATTTATCCAA
 
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JMSF031N18+           GTCATCGGAAGTGGAGAGTACGGGCTTTTTCACGGCGACTTTCCGGCCGTTGAGAATGGC
                      ____________________________________________________________
consensus             GTCATCGGAAGTGGAGAGTACGGGCTTTTTCACGGCGACTTTCCGGCCGTTGAGAATGGC
 
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JMSF009P15+                                             GGGGAAGAGAGAGAGTAAGAGGAAGG
JMSF031N18+           TTCATACACCACACTCTCTGCACCTCGGGCAATCGGGGAAGAGAGAGAGTAAGAGGAAGG
                      ____________________________________________________________
consensus             TTCATACACCACACTCTCTGCACCTCGGGCAATCGGGGAAGAGAGAGAGTAAGAGGAAGG
 
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JMSF009P15+           AGGGAGATGCAGAGGGATTGTTTGGCTGTGGCAACACCCGCGAACGCAAGTGTTTGGTTC
JMSF031N18+           AGGGAGATGCAGAGGGATTGTTTGGCTGTGGCAACACCCGCGAACGCAAGTGTTTGGTTC
                      ____________________________________________________________
consensus             AGGGAGATGCAGAGGGATTGTTTGGCTGTGGCAACACCCGCGAACGCAAGTGTTTGGTTC
 
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JMSF009P15+           CACGATCTCAATAGCCATGACTGATGTTTCTTTCCAAACGAGGAATTACAATTCCGATAG
JMSF031N18+           CACGATCTCAATAGCCATGACTGATGTTTCTTTCCAAACGAGGAATTACAATTCCGATAG
                      ____________________________________________________________
consensus             CACGATCTCAATAGCCATGACTGATGTTTCTTTCCAAACGAGGAATTACAATTCCGATAG
 
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JMSF009P15+           TTTGGGATATTCCTCCTCTTTCCCTTTCTCCGCCGGAGAC                    
JMSF031N18+           TTTGGGATATTCCTCCTCTTTCCCTTTCTCCGCCGGAGACCGGAGTGTTGTTGGTTTACA
                      ____________________________________________________________
consensus             TTTGGGATATTCCTCCTCTTTCCCTTTCTCCGCCGGAGACCGGAGTGTTGTTGGTTTACA