Contig 007937:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011G17Sequence423007937 (6)ref|XP_007133039.1|7e-04hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot788020318ref|XP_010097813.1|5e-08hypothetical protein L484_000961 [Morus notabilis] gb|EXB72071.1| hypothetical p
JMSF030N02Sequence649007937 (6)706007937 (6)
JMSF043D08Sequence738020079733007937 (6)
JMSF052E03Sequence692007937 (6)955007937 (6)

Alignment

This contig is upended


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rJMSF043D08-                                  CATTACAACATTCAATAATATTCAATTAAGCATCTG
rJMSF030N02-                                          CATTCAATAATATTCAATTAAGCATCTG
rJMSF052E03-                                  CATTACAACATTCAATAATATTCAATTAAGCATCTG
                      ____________________________________________________________
consensus                                     CATTACAACATTCAATAATATTCAATTAAGCATCTG
 
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rJMSF043D08-          CAAGATTATTGCATTTTCTACCATACTATCAGAGGTATCTTTCCTTGAGTATCCACAACA
rJMSF030N02-          CAAGATTATTGCATTTTCTACCATACTATCAGAGGTATCTTTCCTTGAGTATCCACAACA
rJMSF052E03-          CAAGATTATTGCATTTTCTACCATACTATCAGAGGTATCTTTCCTTGAGTATCCACAACA
                      ____________________________________________________________
consensus             CAAGATTATTGCATTTTCTACCATACTATCAGAGGTATCTTTCCTTGAGTATCCACAACA
 
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rJMSF043D08-          GCAAGCAGAGGTTTCCTCCTTCAATTCAAATACCCATACACTGCTTCATCGATATGATCT
rJMSF030N02-          GCAAGCAGAGGTTTCCTCCTTCAATTCAAATACCCATACACTGCTTCATCGATATGATCT
rJMSF052E03-          GCAAGCAGAGGTTTCCTCCTTCAATTCAAATACCCATACACTGCTTCATCGATATGATCT
                      ____________________________________________________________
consensus             GCAAGCAGAGGTTTCCTCCTTCAATTCAAATACCCATACACTGCTTCATCGATATGATCT
 
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rJMSF043D08-          TAGAAGTGTTAGAGACTAAATACAAGGCATGGTAGCTTTCACGAGCTTCAACAATGCAAA
rJMSF030N02-          TAGAAGTGTTAGAGACTAAATACAAGGCATGGTAGCTTTCACGAGCTTCAACAATGCAAA
rJMSF052E03-          TAGAAGTGTTAGAGACTAAATACAAGGCATGGTAGCTTTCACGAGCTTCAACAATGCAAA
                      ____________________________________________________________
consensus             TAGAAGTGTTAGAGACTAAATACAAGGCATGGTAGCTTTCACGAGCTTCAACAATGCAAA
 
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rJMSF043D08-          ACATCATAATAACAATATAATAATGCAAAACTATGGATCAAGAAACCAATGCCAAACACA
rJMSF030N02-          ACATCATAATAACAATATAATAATGCAAAACTATGGATCAAGAAACCAATGCCAAACACA
rJMSF052E03-          ACATCATAATAACAATATAATAATGCAAAACTATGGATCAAGAAACCAATGCCAAACACA
                      ____________________________________________________________
consensus             ACATCATAATAACAATATAATAATGCAAAACTATGGATCAAGAAACCAATGCCAAACACA
 
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rJMSF043D08-          GACTGACTGTCACACCAAACAGAAAAAAATTGAAATGCTACAAATTCATAGGATTGCGTA
rJMSF030N02-          GACTGACTGTCACACCAAACAGAAAAAAATTGAAATGCTACAAATTCATAGGATTGCGTA
rJMSF052E03-          GACTGACTGTCACACCAAACAGAAAAAAATTGAAATGCTACAAATTCATAGGATTGCGTA
                      ____________________________________________________________
consensus             GACTGACTGTCACACCAAACAGAAAAAAATTGAAATGCTACAAATTCATAGGATTGCGTA
 
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rJMSF043D08-          TCAGTTATCAAACAAAGAAGGAAGTTACCATATTGCAATGTGCAACTTTGAGAAACTTAG
rJMSF030N02-          TCAGTTATCAAACAAAGAAGGAAGTTACCATATTGCAATGTGCAACTTTGAGAAACTTAG
rJMSF052E03-          TCAGTTATCAAACAAAGAAGGAAGTTACCATATTGCAATGTGCAACTTTGAGAAACTTAG
                      ____________________________________________________________
consensus             TCAGTTATCAAACAAAGAAGGAAGTTACCATATTGCAATGTGCAACTTTGAGAAACTTAG
 
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rJMSF043D08-          TAAGGAACTACAAGATCAGAAGAAGAAATTAAAGTGGTATGTTCACAGTTCACCAGGAGA
rJMSF030N02-          TAAGGAACTACAAGATCAGAAGAAGAAATTAAAGTGGTATGTTCACAGTTCACCAGGAGA
rJMSF052E03-          TAAGGAACTACAAGATCAGAAGAAGAAATTAAAGTGGTATGTTCACAGTTCACCAGGAGA
JMSF052E03+                                                    TTCACAGTTCACCAGGAGA
                      ____________________________________________________________
consensus             TAAGGAACTACAAGATCAGAAGAAGAAATTAAAGTGGTATGTTCACAGTTCACCAGGAGA
 
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rJMSF043D08-          CATTCTAACCACAATATACACTGAGTAAGAGCTTGCTGATAGATTCTCGATCTTCCACCA
rJMSF030N02-          CATTCTAACCACAATATACACTGAGTAAGAGCTTGCTGATAGATTCTCGATCTTCCACCA
rJMSF052E03-          CATTCTAACCACAATATACACTGAGTAAGAGCTTGCTGATAGATTCTCGATCTTCCACCA
JMSF052E03+           CATTCTAACCACAATATACACTGAGTAAGAGCTTGCTGATAGATTCTCGATCTTCCACCA
JMSF030N02+                      CAATATACACTGAGTAAGAGCTTGCTGATAGATTCTCGATCTTCCACCA
                      ____________________________________________________________
consensus             CATTCTAACCACAATATACACTGAGTAAGAGCTTGCTGATAGATTCTCGATCTTCCACCA
 
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rJMSF043D08-          ATGCAATTGGAATTGCCTTTATGTAAACTGTAAACTGCCTACATTATTTATCCATAATCC
rJMSF030N02-          ATGCAATTGGAATTGCCTTTATGTAAACTGTAAACTGCCTACATTATTTATCCATAATCC
rJMSF052E03-          ATGCAATTGGAATTGCCTTTATGTAAACTGTAAACTGCCTACATTATTTATCCATAATCC
JMSF052E03+           ATGCAATTGGAATTGCCTTTATGTAAACTGTAAACTGCCTACATTATTTATCCATAATCC
JMSF030N02+           ATGCAATNGGAATTGCCTTTATGTAAACTGTAAACTGCCTACATTATTTATCCATAATCC
                      ____________________________________________________________
consensus             ATGCAATTGGAATTGCCTTTATGTAAACTGTAAACTGCCTACATTATTTATCCATAATCC
 
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rJMSF043D08-          ATAACAACGATCAAATTAGCATG-AAAGAAAAATGCATAATCTCAATTCACACCCCTAAT
rJMSF030N02-          ATAACAACGATCAAATTAGCATGAAAAGAAAAATGCATAATCTCAATTCACACCCCTAAT
rJMSF052E03-          ATAACAACGATCAAATTAGCATGAAAAGAAAAATGCATAATCTCAATTCACACCCCTAAT
JMSF052E03+           ATAACAACGATCAAATTAGCATGAAAAGAAAAATGCATAATCTCAATTCACACCCCTAAT
JMSF030N02+           ATAACAACGATCAAATTAGCATGAAAAGAAAAATGCATAATCTCAATTCACACCCCTAAT
                      ____________________________________________________________
consensus             ATAACAACGATCAAATTAGCATGAAAAGAAAAATGCATAATCTCAATTCACACCCCTAAT
 
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rJMSF043D08-          TTCATTCCCCTAAATGCAATATATGATCAAAACTGTG-AATTTGACATATATAGTAGCAA
rJMSF030N02-          TTCATTCCCCTAA                                               
rJMSF052E03-          TTCATTCCCCTAAATGCAATATATGATCAAAACTGTGAAATTTGACATATATAGTAGCAA
JMSF052E03+           TTCATTCCCCTAAATGCAATATATGATCAAAACTGTGAAATTTGACATATATAGTAGCAA
JMSF030N02+           TTCATTCCCCTAAATGCAATATATGATCAAAACTGTGAAATTTGACATATATAGTAGCAA
                      ____________________________________________________________
consensus             TTCATTCCCCTAAATGCAATATATGATCAAAACTGTGAAATTTGACATATATAGTAGCAA
 
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rJMSF043D08-          TGCTTACAAATAATGCGCCC                                        
rJMSF052E03-          TGCTTACAAATAATGCGCCCGTTGTTTCTTCATCTCCTTCCGTCACAATGATACAACGCA
JMSF052E03+           TGCTTACAAATAATGCGCCCGTTGTTTCTTCATCTCCTTCCGTCACAATGATACAACGCA
JMSF030N02+           TGCTTACAAATAATGCGCCCGTTGTTTCTTCATCTCCTTCCGTCACAATGATACAACGCA
                      ____________________________________________________________
consensus             TGCTTACAAATAATGCGCCCGTTGTTTCTTCATCTCCTTCCGTCACAATGATACAACGCA
 
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rJMSF052E03-          AATCTCATAGCTGTCAAAAACCATGAATACACAATAGTTGTCTGCTCCATTTTTACGCCA
JMSF052E03+           AATCTCATAGCTGTCAAAAACCATGAATACACAATAGTTGTCTGCTCCATTTTTACGCCA
JMSF011G17+                                      TACACCATATTTGTCTGCTCCACTTTTTCCCCA
JMSF030N02+           AATCTCATAGCTGTCAAAAACCATGAATACACAATAGTTGTCTGCTCCATTTTTACGCCA
                      ____________________________________________________________
consensus             AATCTCATAGCTGTCAAAAACCATGAATACACAATAGTTGTCTGCTCCATTTTTACGCCA
 
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rJMSF052E03-          TGAAAGCCAAACAAGCCCTCGCACAACTTCCCACATCGAAACCATATGAGAAATATGTTC
JMSF052E03+           TGAAAGCCAAACAAGCCCTCGCACAACTTCCCACATCGAAACCATATGAGAAATATGTTC
JMSF011G17+           TGAAAGCGAAACAAGGCCTTGCACAATATCCCACATTGAAACCAGATGAGAAATATTTTC
JMSF030N02+           TGAAAGCCAAACAAGCCCTCGCACAACTTCCCACATCGAAACCATATGAGAAATATGTTC
                      ____________________________________________________________
consensus             TGAAAGCCAAACAAGCCCTCGCACAACTTCCCACATCGAAACCATATGAGAAATATGTTC
 
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rJMSF052E03-          TCTTAATAAGTCCCTAGCTAGAAGAATTGCTTGCTGGGCTTGGTAGTGCGAGCTTGTAAC
JMSF052E03+           TCTTAATAAGTCCCTAGCTAGAAGAATTGCTTGCTGGGCTTGGTAGTGCGAGCTTGTAAC
JMSF011G17+           TCATAATAACTCCCTAGCTAGAAGAATGGCTTGCTGGGCTTGGTAGCACGAGCTTGTAAC
JMSF030N02+           TCTTAATAAGTCCCTAGCTAGAAGAATTGCTTGCTGGGCTTGGTAGTGCGAGCTTGTAAC
                      ____________________________________________________________
consensus             TCTTAATAAGTCCCTAGCTAGAAGAATTGCTTGCTGGGCTTGGTAGTGCGAGCTTGTAAC
 
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rJMSF052E03-          TCAAGCGAGAGCATNAAGA                                         
JMSF052E03+           TCAAGCGAGAGCATTAAGATGGTGGAAGAATTGGGCTTGCTCTGAAGGCTGGGCTTAGGT
JMSF011G17+           CCAAGTGGGAGCATTAAGATGGTGGAA                                 
JMSF030N02+           TCAAGCGAGAGCATTAAGATGGTGGAAGAATTGGGCTTGCTCTGAAGGCTGGGCTTAGGT
                      ____________________________________________________________
consensus             TCAAGCGAGAGCATTAAGATGGTGGAAGAATTGGGCTTGCTCTGAAGGCTGGGCTTAGGT
 
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JMSF052E03+           TGCTATCTACTGGCCTGCCCATTCCAAGTGGTGAGTTGATGGAGTAGTCTTAGCGAAGGC
JMSF030N02+           TGCTATCTACTGGCCTGCCCATTCCAAGTGGTGAGTTGATGGAGTAGTCTTAGCGAAGGC
                      ____________________________________________________________
consensus             TGCTATCTACTGGCCTGCCCATTCCAAGTGGTGAGTTGATGGAGTAGTCTTAGCGAAGGC
 
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JMSF052E03+           GGAGGCTACTCCCTCCTTAGATTGGAGGGTACTGCGTGAGGCTGGCTTCACAGAGCAGC 
JMSF030N02+           GGAGGCTACTCCCTCCTTAGATTGGAGGGTACTGCGTGAGGCTGGCTTCACAGAGCAGCC
                      ____________________________________________________________
consensus             GGAGGCTACTCCCTCCTTAGATTGGAGGGTACTGCGTGAGGCTGGCTTCACAGAGCAGCC