Contig 007933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017K15Sequence608007933 (4)781001092 (2)ref|XP_006338564.1|2e-49PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X1 [Solanum tuber
JMFS152D08Sequence483007933 (4)
JMFS168H03Sequence620007933 (4)
JMSF029O07Sequence611007933 (4)730001092 (2)ref|XP_006338564.1|4e-44PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X1 [Solanum tuber

Alignment

This contig is upended


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JMFS168H03+                      TATGACATAACATAANAATGCCCTTTNTGCCCTAAGCTCTCAAAGAAGA
JMFF017K15+                                                              CAAAGAAGA
JMSF029O07+                                                              CAAAGAAGA
                      ____________________________________________________________
consensus                        TATGACATAACATAANAATGCCCTTTNTGCCCTAAGCTCTCAAAGAAGA
 
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JMFS168H03+           TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
JMFF017K15+           TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
JMSF029O07+           TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
                      ____________________________________________________________
consensus             TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
 
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JMFS152D08+                                   AATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
JMFS168H03+           TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
JMFF017K15+           TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
JMSF029O07+           TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
                      ____________________________________________________________
consensus             TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
 
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JMFS152D08+           ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
JMFS168H03+           ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
JMFF017K15+           ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
JMSF029O07+           ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
                      ____________________________________________________________
consensus             ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
 
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JMFS152D08+           CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
JMFS168H03+           CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
JMFF017K15+           CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
JMSF029O07+           CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
                      ____________________________________________________________
consensus             CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
 
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JMFS152D08+           TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
JMFS168H03+           TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
JMFF017K15+           TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
JMSF029O07+           TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
                      ____________________________________________________________
consensus             TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
 
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JMFS152D08+           TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
JMFS168H03+           TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
JMFF017K15+           TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
JMSF029O07+           TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
                      ____________________________________________________________
consensus             TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
 
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JMFS152D08+           ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
JMFS168H03+           ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
JMFF017K15+           ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
JMSF029O07+           ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
                      ____________________________________________________________
consensus             ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
 
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JMFS152D08+           TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
JMFS168H03+           TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
JMFF017K15+           TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
JMSF029O07+           TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
                      ____________________________________________________________
consensus             TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
 
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JMFS152D08+           TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
JMFS168H03+           TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
JMFF017K15+           TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
JMSF029O07+           TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
                      ____________________________________________________________
consensus             TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
 
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JMFS152D08+           CCTAGGGTTTC                                                 
JMFS168H03+           CCTAGGGTTTCGAGACCAGAGAAAACGCTAA                             
JMFF017K15+           CCTAGGGTTTCGAGACCAGAGAAAACGCTAAATAAAGGACTTCGATATGAGCTGAAA   
JMSF029O07+           CCTAGGGTTTCGAGACCAGAGAAAACGCTAAATAAAGGACTTCGATATGAGCTGAAATTC
                      ____________________________________________________________
consensus             CCTAGGGTTTCGAGACCAGAGAAAACGCTAAATAAAGGACTTCGATATGAGCTGAAATTC