Contig 007929:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018G14Sequence581007929 (3)gb|EYU21205.1|1e-71hypothetical protein MIMGU_mgv1a006687mg [Erythranthe guttata]
JMSF028L11Sequence640007929 (3)ref|XP_008342642.1|2e-111PREDICTED: 7-dehydrocholesterol reductase-like [Malus domestica]
JMSF029H05Sequence687007929 (3)ref|XP_008342642.1|2e-87PREDICTED: 7-dehydrocholesterol reductase-like [Malus domestica]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+                                                           AGACATCATGCC
                      ____________________________________________________________
consensus                                                             AGACATCATGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           AAATCTGCAGTTTGTGAAAACTTTGATATCAAAGTGTTTGCCAATACGAGGATATAGCTC
                      ____________________________________________________________
consensus             AAATCTGCAGTTTGTGAAAACTTTGATATCAAAGTGTTTGCCAATACGAGGATATAGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           CATCCCCCAGTAGAAGTCAATAATTATGTTTCCTGATGAACCAGAATCAGAGGAAGATGG
JMSF029H05+                                            TGATGAACCAGAATCAGAGGAAGATGG
                      ____________________________________________________________
consensus             CATCCCCCAGTAGAAGTCAATAATTATGTTTCCTGATGAACCAGAATCAGAGGAAGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           TGCAACATGACCTTTAATGTATAAGAAAACACAAAAGATAAAGCTTCCGAAAATGAGTGT
JMSF018G14+                                                   AAGCTTCCGAAAATGAGTGT
JMSF029H05+           TGCAACATGACCTTTAATGTATAAGAAAACACAAAAGATAAAGCTTCCGAAAATGAGTGT
                      ____________________________________________________________
consensus             TGCAACATGACCTTTAATGTATAAGAAAACACAAAAGATAAAGCTTCCGAAAATGAGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           GGAGTATATCTCTCCCAAATGGTCGTAAACGATTGAAGGATTGAATATCCCGAACCACCA
JMSF018G14+           GGAGTATATCTCTCCCAAATGGTCGTAAACGATTGAAGGATTGAATATCCCGAACCACCA
JMSF029H05+           GGAGTATATCTCTCCCAAATGGTCGTAAACGATTGAAGGATTGAATATCCCGAACCACCA
                      ____________________________________________________________
consensus             GGAGTATATCTCTCCCAAATGGTCGTAAACGATTGAAGGATTGAATATCCCGAACCACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           AAGGCCGAGATATGTAGCCAACGTCACTGCATATGCTAGCACACCATTTGCCTTGTATAC
JMSF018G14+           AAGGCCGAGATATGTAGCCAACGTCACTGCATATGCTAGCACACCATTTGCCTTGTATAC
JMSF029H05+           AAGGCCGAGATATGTAGCCAACGTCACTGCATATGCTAGCACACCATTTGCCTTGTATAC
                      ____________________________________________________________
consensus             AAGGCCGAGATATGTAGCCAACGTCACTGCATATGCTAGCACACCATTTGCCTTGTATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           AGGCCTGTTTCCAGTGGGAGAAATCGGTCCCTCGTGCCTCTTCCCAGGTAATAGAAGCTG
JMSF018G14+           AGGCCTGTTTCCAGTGGGAGAAATCGGTCCCTCGTGCCTCTTCCCAGGTAATAGAAGCTG
JMSF029H05+           AGGCCTGTTTCCAGTGGGAGAAATCGGTCCCTCGTGCCTCTTCCCAGGTAATAGAAGCTG
                      ____________________________________________________________
consensus             AGGCCTGTTTCCAGTGGGAGAAATCGGTCCCTCGTGCCTCTTCCCAGGTAATAGAAGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           AAGAGCAGCCTCAAAGACTGCATAACAAGCAATAATTTTGCAAGCAATTGCCGTAGGTCT
JMSF018G14+           AAGAGCAGCCTCAAAGATTGCATAACAAGCAATAATTTTGCAAGCAATTGCCGTAGGTCT
JMSF029H05+           AAGAGCAGCCTCAAAGATTGCATAACAAGCAATAATTTTGCAAGCAATTGCCGTAGGTCT
                      ____________________________________________________________
consensus             AAGAGCAGCCTCAAAGATTGCATAACAAGCAATAATTTTGCAAGCAATTGCCGTAGGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           CGGCCAGATTTCGAGTAATCCTTTCAGACCATTCTGGTGCAGGTAATTCCAAGTTTGCAA
JMSF018G14+           CGGCCAGATTTCGAGTAATCCTTTCAGACCATTCTGGTGCAGGTAATTCCAAGTTTGCAA
JMSF029H05+           CGGCCAGATTTCGAGTAATCCTTTCAGACCATTCTGGTGCAGGTAATTCCAAGTTTGCAA
                      ____________________________________________________________
consensus             CGGCCAGATTTCGAGTAATCCTTTCAGACCATTCTGGTGCAGGTAATTCCAAGTTTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           TACAGAGCCATCAGCATGTACCATAGTATACCACAGTAGAATGACGAAAGGAGGGCAGGA
JMSF018G14+           TACAGAGCCATCAGCATGTACCATAGTATACCACAGTAGAATGACGAAAGGAGGGCAGGA
JMSF029H05+           TACAGAGCCATCAGCATGTACCATAGTATACCACAGTAGAATGACGAAAGGAGGGCAGGA
                      ____________________________________________________________
consensus             TACAGAGCCATCAGCATGTACCATAGTATACCACAGTAGAATGACGAAAGGAGGGCAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           GATGAGCAGAGAGAGAACCGATGCATATGTCACCAATGGCGAGTGCACTAACGTCGAGTC
JMSF018G14+           GATGAGCAGAGAGAGAACCGATGCATATGTCACCAATGGCGAGTGCACTAACGTCGAGTC
JMSF029H05+           GATGAGCAGAGAGAGAACCGATGCATATGTCACCAATGGCGAGTGCACTAACGTCGAGTC
                      ____________________________________________________________
consensus             GATGAGCAGAGAGAGAACCGATGCATATGTCACCAATGGCGAGTGCACTAACGTCGAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028L11+           TTTCGCCATTGCTTAATGTCCGATCG                                  
JMSF018G14+           TTTCGCCATTGCTTAATGTCCGATCGGCTTCCGCCTCTAGGAAGTCAAGCCGCCTCTAAT
JMSF029H05+           TTTCGCCATTGCTTAATGTCCGATCGGCTTCCGCCTCTAGGAAGTCAAGCCGCCTCTAAT
                      ____________________________________________________________
consensus             TTTCGCCATTGCTTAATGTCCGATCGGCTTCCGCCTCTAGGAAGTCAAGCCGCCTCTAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018G14+           AACTCCTCTTCCGCCGTGAACTGAGCAGCGTGTCTGGGTGGCAAAGCAGTGGCGATAGGC
JMSF029H05+           AACTCCTCTTCCGCCGTGAACTGAGCAGCGTGTCTGGGTGGCAAAGCAGTGGCGATAGGC
                      ____________________________________________________________
consensus             AACTCCTCTTCCGCCGTGAACTGAGCAGCGTGTCTGGGTGGCAAAGCAGTGGCGATAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018G14+           GAAGACGACGAGAAGA                                            
JMSF029H05+           GAAGACGACGAGAAGACGCGACTCTCACTGAATCAGATTCCAATGAAATGCTTAGCCCAC
                      ____________________________________________________________
consensus             GAAGACGACGAGAAGACGCGACTCTCACTGAATCAGATTCCAATGAAATGCTTAGCCCAC