Contig 007928:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN010B20Sequence637007928 (5)ref|XP_009614221.1|4e-61PREDICTED: ethylene-responsive transcription factor ERF010-like [Nicotiana tome
JMFN016K12Sequence398007928 (5)ref|XP_011017174.1|1e-07PREDICTED: ethylene-responsive transcription factor RAP2-1-like [Populus euphra
JMFN019C12Sequence598007928 (5)ref|XP_009614221.1|5e-61PREDICTED: ethylene-responsive transcription factor ERF010-like [Nicotiana tome
JMSF029G14Sequence635007928 (5)ref|XP_004238136.1|7e-60PREDICTED: ethylene-responsive transcription factor ERF010-like [Solanum lycope772007928 (5)ref|XP_009614221.1|3e-60PREDICTED: ethylene-responsive transcription factor ERF010-like [Nicotiana tome

Alignment

This contig is upended


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JMFN016K12-                                                                      G
                      ____________________________________________________________
consensus                                                                        G
 
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JMFN016K12-           AGGGTCTCGAGXXXXXXXXXXXXXXXXXXXAACTGAATATATTTGGATTGTTGTATGTAT
                      ____________________________________________________________
consensus             AGGGTCTCGAGNNNNNNNNNNNNNNNNNNNAACTGAATATATTTGGATTGTTGTATGTAT
 
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JMFN016K12-           AGTAATTTTTTTGATTATATAATTTAAACAACTAGTTGAAGGTAAACTATGAACATATAA
JMFN019C12+            GTAATTTTTTTGATTATATAATTTAAACAACTAGTTGAAGGTAAACTATGAACATATAA
rJMSF029G14-           GTAATTTTTTTGATTATATAATTTAAACAACTAGTTGAAGGTAAACTATGAACATATAA
                      ____________________________________________________________
consensus             AGTAATTTTTTTGATTATATAATTTAAACAACTAGTTGAAGGTAAACTATGAACATATAA
 
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JMFN016K12-           TCCCTTCGGATTATACCGGAAAACATCATGGGTGTGCGGCGGCCGGAAAATTGCTGTTTG
JMFN019C12+           TCCCTTCGGATTATACCGGAAAACATCATGGGTGTGCGGCGGCCGGAAAATTGCTGTTTG
JMFN010B20+                         ACCGGAAAACATCATGGGTGTGCGGCGGCCGGAAAATTGCTGTTTG
rJMSF029G14-          TCCCTTCGGATTATACCGGAAAACATCATGGGTGTGCGGCGGCCGGAAAATTGCTGTTTG
                      ____________________________________________________________
consensus             TCCCTTCGGATTATACCGGAAAACATCATGGGTGTGCGGCGGCCGGAAAATTGCTGTTTG
 
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JMFN016K12-           GTGTCCGCCGTCGTGGAGGGTCAGTTGTCTTCCTCGGAGCTGTCGGGGCTGGGGTACTCG
JMFN019C12+           GTGTCCGCCGTCGTGGAGGGTCAGTTGTCTTCCTCGGAGCTGTCGGGGCTGGGGTACTCG
JMFN010B20+           GTGTCCGCCGTCGTGGAGGGTCAGTTGTCTTCCTCGGAGCTGTCGGGGCTGGGGTACTCG
rJMSF029G14-          GTGTCCGCCGTCGTGGAGGGTCAGTTGTCTTCCTCGGAGCTGTCGGGGCTGGGGTACTCG
                      ____________________________________________________________
consensus             GTGTCCGCCGTCGTGGAGGGTCAGTTGTCTTCCTCGGAGCTGTCGGGGCTGGGGTACTCG
 
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JMFN016K12-           TTCAAGTCGGGTTTCAAGGGGGCGGGGCGGGTTTGGATCGGGTTCCGGTCGGATTTGGGC
JMFN019C12+           TTCAAGTCGGGTTTCAAGGGGGCGGGGCGGGTTTGGATCGGGTTCCGGTCGGATTTGGGC
JMFN010B20+           TTCAAGTCGGGTTTCAAGGGGGCGGGGCGGGTTTGGATCGGGTTCCGGTCGGATTTGGGC
rJMSF029G14-          TTCAAGTCGGGTTTCAAGGGGGCGGGGCGGGTTTGGATCGGGTTCCGGTCGGATTTGGGC
JMSF029G14+                                    GGCGGGTTTGGATCGGGTTCCGGTCGGATTTGGGC
                      ____________________________________________________________
consensus             TTCAAGTCGGGTTTCAAGGGGGCGGGGCGGGTTTGGATCGGGTTCCGGTCGGATTTGGGC
 
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JMFN016K12-           GGTGCATGGGGAGCGGTCTGGAGGGCGTCAACCCTAGCTCCGACTTCGGTGGCCTTCTTG
JMFN019C12+           GGTGCATGGGGAGCGGTCTGGAGGGCGTCAACCCTAGCTCCGACTTCGGTGGCCTTCTTG
JMFN010B20+           GGTGCATGGGGAGCGGTCTGGAGGGCGTCAACCCTAGCTCCGACTTCGGTGGCCTTCTTG
rJMSF029G14-          GGTGCATGGGGAGCGGTCTGGAGGGCGTCAACCCTAGCTCCGACTTCGGTGGCCTTCTTG
JMSF029G14+           GGTGCATGGGGAGCGGTCTGGAGGGCGTCAACCCTAGCTCCGACTTCGGTGGCCTTCTTG
                      ____________________________________________________________
consensus             GGTGCATGGGGAGCGGTCTGGAGGGCGTCAACCCTAGCTCCGACTTCGGTGGCCTTCTTG
 
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JMFN016K12-           CGGATATCGGCGGCGGAAAGGTCTGGGAGCCGATCGT                       
JMFN019C12+           CGGATATCGGCGGCGGAGAGGTCTGGGAGCCGATCGTCGTGGACGAAGAACTCGGGGAAG
JMFN010B20+           CGGATATCGGCGGCGGAGAGGTCTGGGAGCCGATCGTCGTGGACGAAGAACTCGGGGAAG
rJMSF029G14-          CGGATATCGGCGGCGGAGAGGTCTGGGAGCCGATCGTCGTGGACGAAGAACTCGGGGAAG
JMSF029G14+           CGGATATCGGCGGCGGAGAGGTCTGGGAGCCGATCGTCGTGGACGAAGAACTCGGGGAAG
                      ____________________________________________________________
consensus             CGGATATCGGCGGCGGAGAGGTCTGGGAGCCGATCGTCGTGGACGAAGAACTCGGGGAAG
 
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JMFN019C12+           TTGAGGCGGGCGGAGGGGCCGCGGAGGTAGAAGACGGCGGTGTCGTAAGCGCGGGCGGCG
JMFN010B20+           TTGAGGCGGGCGGAGGGGCCGCGGAGGTAGAAGACGGCGGTGTCGTAAGCGCGGGCGGCG
rJMSF029G14-          TTGAGGCGGGCGGAGGGGCCGCGGAGGTAGAAGACGGCGGTGTCGTAAGCGCGGGCGGCG
JMSF029G14+           TTGAGGCGGGCGGAGGGGCCGCGGAGGTAGAAGACGGCGGTGTCGTAAGCGCGGGCGGCG
                      ____________________________________________________________
consensus             TTGAGGCGGGCGGAGGGGCCGCGGAGGTAGAAGACGGCGGTGTCGTAAGCGCGGGCGGCG
 
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JMFN019C12+           GCGACGGGGGAGGAGTAGGAGCCGAGCCAAATCCGGGAGCGTTTGTTGGGCTCGCGAATC
JMFN010B20+           GCGACGGGGGAGGAGTAGGAGCCGAGCCAAATCCGGGAGCGTTTGTTGGGCTCGCGAATC
rJMSF029G14-          GCGACGGGGGAGGAGTAGGAGCCGAGCCAAATCCGGGAGCGTTTGTTGGGCTCGCGAATC
JMSF029G14+           GCGACGGGGGAGGAGTAGGAGCCGAGCCAAATCCGGGAGCGTTTGTTGGGCTCGCGAATC
                      ____________________________________________________________
consensus             GCGACGGGGGAGGAGTAGGAGCCGAGCCAAATCCGGGAGCGTTTGTTGGGCTCGCGAATC
 
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JMFN019C12+           TCCGCCACCCACTTCCCCCACTTCCTCATGCGAATCCCCCTGTAGGGTTTCTCCTGCTGG
JMFN010B20+           TCCGCCACCCACTTCCCCCACTTCCTCATGCGAATCCCCCTGTAGGGTTTCTCCTGCTGG
rJMSF029G14-          TCCGCCACCCACTTCCCCCACTTCCTCATGCGAATCCCCCTGTAGGGTTTCTCCTGCTGG
JMSF029G14+           TCCGCCACCCACTTCCCCCACTTCCTCATGCGAATCCCCCTGTAGGGTTTCTCCTGCTGG
                      ____________________________________________________________
consensus             TCCGCCACCCACTTCCCCCACTTCCTCATGCGAATCCCCCTGTAGGGTTTCTCCTGCTGG
 
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JMFN019C12+           CTCTGCCGGCGCTTCCGCTTCTCCGCCTCTCTTCCGCCGTCCATCATCGGAAAATCAA  
JMFN010B20+           CTCTGCCGGCGCTTCCGCTTCTCCGCCTCTCTTCCGCCGTCCATCATCGGAAAATCAAGA
rJMSF029G14-          CTCTGCCGGCGCTTCCGCTTCTCCGCCTCTCTTCCGCCGTCCATCATCGGAAAATCAAGA
JMSF029G14+           CTCTGCCGGCGCTTCCGCTTCTCCGCCTCTCTTCCGCCGTCCATCATCGGAAAATCAAGA
                      ____________________________________________________________
consensus             CTCTGCCGGCGCTTCCGCTTCTCCGCCTCTCTTCCGCCGTCCATCATCGGAAAATCAAGA
 
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JMFN010B20+           ATCCTCAGCTCTTCCCTTACTTAATCAAGCCGCCGGGGATAGCGAAGAACAGGAATAAGG
rJMSF029G14-          ATCCTCAGCTCTTCCCTTACTTAATCAAGCCGCCGGGGATAGCGAAGAACAGGAATAAGG
JMSF029G14+           ATCCTCAGCTCTTCCCTTACTTAATCAAGCCGCCGGGGATAGCGAAGAACAGGAATAAGG
                      ____________________________________________________________
consensus             ATCCTCAGCTCTTCCCTTACTTAATCAAGCCGCCGGGGATAGCGAAGAACAGGAATAAGG
 
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JMFN010B20+           AAACCCTGGATTAAGAAGGAGGAGAGAAATTAAAAAGGAGAATCTATCCAG         
rJMSF029G14-          AAACCCTGGATTAAGAAGGAGGAGAGAAATTAAAAAGGAGAATCTATCCAGGAATTCAGC
JMSF029G14+           AAACCCTGGATTAAGAAGGAGGAGAGAAATTAAAAAGGAGAATCTATCCAGGAATTCAGC
                      ____________________________________________________________
consensus             AAACCCTGGATTAAGAAGGAGGAGAGAAATTAAAAAGGAGAATCTATCCAGGAATTCAGC
 
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rJMSF029G14-          TGTGCACCAGGAAACGCTTG-CCCCCCGCCNAGCTGTCGTATTTATATGCGGGG      
JMSF029G14+           TGTGCACCAGGAAACGCTTGCCCCCCCGCCCAGCTGTCGTATTTATATGCGGGGTGGTGC
                      ____________________________________________________________
consensus             TGTGCACCAGGAAACGCTTGCCCCCCCGCCCAGCTGTCGTATTTATATGCGGGGTGGTGC
 
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JMSF029G14+           CTTGTGGAAATCAACGGCGGAACGTTACGTAGAGAGAGAAAACGGAGTTTTATACCCCGC
                      ____________________________________________________________
consensus             CTTGTGGAAATCAACGGCGGAACGTTACGTAGAGAGAGAAAACGGAGTTTTATACCCCGC