Contig 007927:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011K07Sequence528007927 (7)ref|XP_009610406.1|6e-58PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi615008205 (7)ref|XP_010314208.1|9e-81PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum
JMFF017P16Sequence559007927 (7)ref|XP_009610406.1|2e-73PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi769008205 (7)ref|XP_009610406.1|2e-105PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi
JMFF022E10Sequence548007927 (7)ref|XP_009610406.1|2e-61PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi752008205 (7)ref|XP_010314208.1|1e-100PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum
JMFF032G14Sequence486007927 (7)emb|CAN62077.1|1e-49hypothetical protein VITISV_015539 [Vitis vinifera]637008205 (7)ref|XP_010314208.1|7e-86PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum
JMFS011A06Sequence635007927 (7)ref|XP_009787950.1|5e-89PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana sylvestri
JMSF029C08Sequence657007927 (7)emb|CAN62077.1|5e-68hypothetical protein VITISV_015539 [Vitis vinifera]696008205 (7)ref|XP_009610406.1|9e-91PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi
JMSF046F18Sequence796007927 (7)ref|XP_009787950.1|2e-117PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana sylvestri679008205 (7)ref|XP_010314208.1|6e-54PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum

Alignment

This contig is upended


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JMSF046F18+                                                          TATCAGCAATTGA
                      ____________________________________________________________
consensus                                                            TATCAGCAATTGA
 
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JMSF046F18+           CACAACTACATAGCCAGCAAGANCAATAGCCAAGTATACCACCACAGAATAGACATTCAT
                      ____________________________________________________________
consensus             CACAACTACATAGCCAGCAAGANCAATAGCCAAGTATACCACCACAGAATAGACATTCAT
 
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JMFS011A06+                                     CTTTACTCAATCCCAATGTGTCAAGAGAATGTGC
JMSF046F18+           AGGCATATCGATTGCAATAGCAGAACCTTTACTCAATCCCAATGTTTCAAGAGAATGTGC
                      ____________________________________________________________
consensus             AGGCATATCGATTGCAATAGCAGAACCTTTACTCAATCCCAATGTTTCAAGAGAATGTGC
 
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JMFS011A06+           AACAGCCCAAACCTCTGAACGTAGCTCCTTAAGAGTCATTTTTTCAACAGGTGCTTCATC
JMSF046F18+           AACAGCCCAAACCTCTGAACGTAGCTCCTTAAGAGTCATTTTTTCAACAGGTGCTTCATC
                      ____________________________________________________________
consensus             AACAGCCCAAACCTCTGAACGTAGCTCCTTAAGAGTCATTTTTTCAACAGGTGCTTCATC
 
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JMFS011A06+           ATCTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
JMFF017P16+                                                      CTGTCTCTATTTGGACT
JMSF046F18+           ATCTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
JMSF029C08+             CTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
                      ____________________________________________________________
consensus             ATCTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
 
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JMFS011A06+           GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
JMFF017P16+           GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
JMSF046F18+           GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
JMFF022E10+                                                              TGGATGAGA
JMSF029C08+           GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
                      ____________________________________________________________
consensus             GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
 
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JMFS011A06+           CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMFF017P16+           CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMSF046F18+           CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMFF011K07+                      GTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMFF032G14+                                                                CATCCAA
JMFF022E10+           CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMSF029C08+           CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
                      ____________________________________________________________
consensus             CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
 
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JMFS011A06+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF017P16+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMSF046F18+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF011K07+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF032G14+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF022E10+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMSF029C08+           CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
                      ____________________________________________________________
consensus             CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
 
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JMFS011A06+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF017P16+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMSF046F18+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF011K07+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF032G14+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF022E10+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMSF029C08+           TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
                      ____________________________________________________________
consensus             TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
 
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JMFS011A06+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF017P16+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMSF046F18+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF011K07+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF032G14+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF022E10+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMSF029C08+           GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
                      ____________________________________________________________
consensus             GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
 
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JMFS011A06+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF017P16+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMSF046F18+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF011K07+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF032G14+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF022E10+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMSF029C08+           GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
                      ____________________________________________________________
consensus             GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
 
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JMFS011A06+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF017P16+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMSF046F18+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF011K07+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF032G14+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF022E10+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMSF029C08+           GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
                      ____________________________________________________________
consensus             GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
 
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JMFS011A06+           GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF017P16+           GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMSF046F18+           GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF011K07+           GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF032G14+           GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF022E10+           GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMSF029C08+           GATTCCGGCGAGC-TCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
                      ____________________________________________________________
consensus             GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
 
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JMFS011A06+           G                                                           
JMFF017P16+           GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCT 
JMSF046F18+           GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMFF011K07+           GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMFF032G14+           GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMFF022E10+           GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMSF029C08+           GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
                      ____________________________________________________________
consensus             GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
 
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JMSF046F18+           GT                                                          
JMFF011K07+           GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGA  
JMFF032G14+           GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGA  
JMFF022E10+           GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGA  
JMSF029C08+           GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGACC
                      ____________________________________________________________
consensus             GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGACC