Contig 007923:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS017B12+                                         TCAAGTGCTATCGTATANAATCTTAAAGCA
JMFS106B04+                                AAATTCCGCTCAAGTGCTATCGTATAAAATCTTANAGCA
                      ____________________________________________________________
consensus                                  AAATTCCGCTCAAGTGCTATCGTATAAAATCTTAAAGCA
 
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JMFS017B12+           GGATTAGCTATAGAATCACCACCATCAATCCCCAGTGCATATAACATGCTATCTATACCT
JMFS106B04+           GGATTAGCTATAGAATCACCACCATCAATCACCAGTGCATATAACATGCTATCTATACCT
                      ____________________________________________________________
consensus             GGATTAGCTATAGAATCACCACCATCAATCCCCAGTGCATATAACATGCTATCTATACCT
 
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JMFS017B12+           TCAAAAGCTTCCCGAAGTGTTCTATCACGTGAAGCTGAGAAATTACTTTGCACAGTCCTT
JMFS106B04+           TCAAAAGCTTCCCGAAGTGTTCTATCACGTGAAGCTGAGAAATTACTTTGCACAGTCCTT
                      ____________________________________________________________
consensus             TCAAAAGCTTCCCGAAGTGTTCTATCACGTGAAGCTGAGAAATTACTTTGCACAGTCCTT
 
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JMFS017B12+           ACAAAATTCCCAGACATTTGACTCTGTCCGGCTGCATTTTTAACAAAGGTAACTTCCGTT
JMFS106B04+           ACAAAATTCCCAGACATTTGACTCTGTCCGGCTGCATTTTTAACAAAGGTAACTTCCGTT
                      ____________________________________________________________
consensus             ACAAAATTCCCAGACATTTGACTCTGTCCGGCTGCATTTTTAACAAAGGTAACTTCCGTT
 
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JMFS017B12+           GCAAAATTATCTTCGCTAAGGACTCTCCCACACAGCGTACAGCATTGTCTGCCGTCGACG
JMFS106B04+           GCAAAATTATCTTCGCTAAGGACTCTCCCACACAGCGTACAGCATTGTCTGCCGTCGACG
                      ____________________________________________________________
consensus             GCAAAATTATCTTCGCTAAGGACTCTCCCACACAGCGTACAGCATTGTCTGCCGTCGACG
 
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JMFS017B12+           TTGTCAGCGTGGACACTTTTCCCACAGTAGCTACACCACACCATGATCTTTGGTTCAAGC
JMFS106B04+           TTGTCAGCGTGGACACTTTTCCCACAGTAGCTACACCACACCATGATCTTTGGTTCAAGC
                      ____________________________________________________________
consensus             TTGTCAGCGTGGACACTTTTCCCACAGTAGCTACACCACACCATGATCTTTGGTTCAAGC
 
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JMFS017B12+           ACCCCAACCTTAATCAAATCCTGTTGTGAGGAAGAGACTTCAGCGTTTGGTGATGACTTC
JMFS106B04+           ACCCCAACCTTAATCAAATCCTGTTGTGAGGAAGAGACTTCAGCGTTTGGTGATGACTTC
                      ____________________________________________________________
consensus             ACCCCAACCTTAATCAAATCCTGTTGTGAGGAAGAGACTTCAGCGTTTGGTGATGACTTC
 
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JMFS017B12+           CGTGTATGGAGGCAGCGACTGGTCACCGGAACTTGGTGGCGACTGGCGACTGGCGACTGG
JMFS106B04+           CGTGTATGGAGGCAGCGACTGGTCACCGGAACTTGGTGGCGACTGGCGACTGGCGACTGG
JMSF028K02+                                                      TGGCGATTGGCGACTGG
                      ____________________________________________________________
consensus             CGTGTATGGAGGCAGCGACTGGTCACCGGAACTTGGTGGCGACTGGCGACTGGCGACTGG
 
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JMFS017B12+           CGAGCCCGAGAGGTGCGACCATGCGAGGACAGACAGTGACGGAGAGGAGACGAGAGAC  
JMFS106B04+           CGAGCCCGAGAGGTGCGACCATGCGAGGACAGACAGTGACGGAGAGGAGACGAGAGAC  
JMSF028K02+           CGATCCTGCGAGGTGCGACCGTGCGAGGACAGACAGTGACAGAGAGGAGACGAGAGACAG
                      ____________________________________________________________
consensus             CGAGCCCGAGAGGTGCGACCATGCGAGGACAGACAGTGACGGAGAGGAGACGAGAGACAG
 
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JMSF028K02+           ATATGCGGAGAGTCGAGAGAGCTACGACCAACGAGAGAGGCGGAGAGACGAGAAAGCATT
                      ____________________________________________________________
consensus             ATATGCGGAGAGTCGAGAGAGCTACGACCAACGAGAGAGGCGGAGAGACGAGAAAGCATT
 
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JMSF028K02+           ATAGAGAGAATAGGTCTAAGTAGTGCTGGGAACTTCGAAGATCAATGTGCAATTAGCCGA
                      ____________________________________________________________
consensus             ATAGAGAGAATAGGTCTAAGTAGTGCTGGGAACTTCGAAGATCAATGTGCAATTAGCCGA
 
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JMSF041M19+                                 CCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATTT
JMSF007H11+                                 CCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATTT
JMSF028K02+           GTTGCGGTAGAACGAACAGAAACCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATTT
                      ____________________________________________________________
consensus             GTTGCGGTAGAACGAACAGAAACCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATTT
 
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JMSF041M19+           GTTAGGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAGG
JMSF007H11+           GTTAGGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAGG
JMSF028K02+           GTTAGGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAGG
                      ____________________________________________________________
consensus             GTTAGGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAGG
 
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JMSF041M19+           ACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGAC
JMSF007H11+           ACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGAC
JMSF028K02+           ACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGAC
                      ____________________________________________________________
consensus             ACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGAC
 
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JMSF041M19+           GCCGGAGTCGGAGAGTGTAGGAAACTGTGAGAGGGAGCGGCAGACCTTGTAC        
JMSF007H11+           GCCGGAGTCGGAGAGTGTAGGAAACTGTGAGAGGGAGCGGCAGACCTTGTAC        
JMSF028K02+           GCCGGAGTCGGAGAGTGTAGGAAACTGTGAGAGGGAGCGGCAGACCTTGTACGTTTCTCC
                      ____________________________________________________________
consensus             GCCGGAGTCGGAGAGTGTAGGAAACTGTGAGAGGGAGCGGCAGACCTTGTACGTTTCTCC