Contig 007920:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS020C04+                                                     AGATTATGTGGTATCTCC
JMFS007E09+                                                               GTATCTCC
                      ____________________________________________________________
consensus                                                       AGATTATGTGGTATCTCC
 
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JMFS020C04+           TCGCTTTCATTTAGAGATATGTACAATTCTTCAAAGTTATCAGTATTGGCATTCTCAATC
JMFS016D06+                         AGATATGTACAATTCTTCAAAGTTATCAGTATTGGCATTCTCAATC
JMFS007E09+           TCGCTTTCATTTAGAGATATGTACAATTCTTCAAAGTTATCAGTATTGGCATTCTCAATC
                      ____________________________________________________________
consensus             TCGCTTTCATTTAGAGATATGTACAATTCTTCAAAGTTATCAGTATTGGCATTCTCAATC
 
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JMFS020C04+           AGGTATTTCAGAAAAATAGATGAGATGTACACTGCATTGAGGGCTTTCATAATAGACAAA
JMFS016D06+           AGGTATTTCAGAAAAATAGATGAGATGTACACTGCATTGAGGGCTTTCATAATAGACAAA
JMFS007E09+           AGGTATTTCAGAAAAATAGATGAGATGTACACTGCATTGAGGGCTTTCATAATAGACAAA
                      ____________________________________________________________
consensus             AGGTATTTCAGAAAAATAGATGAGATGTACACTGCATTGAGGGCTTTCATAATAGACAAA
 
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JMFS020C04+           GAAGGTACATCTGATGCAGAAACACACTCTTGCAAACACCAACTTAGATGAACTAGGATC
JMFS016D06+           GAAGGTACATCTGATGCAGAAACACACTCTTGCAAACACCAACTTAGATGAACTAGGATC
JMFS007E09+           GAAGGTACATCTGATGCAGAAACACACTCTTGCAAACACCAACTTAGATGAACTAGGATC
                      ____________________________________________________________
consensus             GAAGGTACATCTGATGCAGAAACACACTCTTGCAAACACCAACTTAGATGAACTAGGATC
 
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JMFS020C04+           TTGGCAAGGTGCCTCGTGTTATGGTTGTTCTTTGCGAAGAGGCGGCAAGCTTCGTGAACA
JMFS016D06+           TTGGCAAGGTGCCTCGTGTTATGGTTGTTCTTTGCGAAGAGGCGGCAAGCTTCGTGAACA
JMFS007E09+           TTGGCAAGGTGCCTCGTGTTATGGTTGTTCTTTGCGAAGAGGCGGCAAGCTTCGTGAACA
                      ____________________________________________________________
consensus             TTGGCAAGGTGCCTCGTGTTATGGTTGTTCTTTGCGAAGAGGCGGCAAGCTTCGTGAACA
 
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JMFS020C04+           CGGTCGGTGGACCAATGGAGGTAGAGTGGGTGCAGGAGAAGCTTCTGCCAGTAATCCGAG
JMFS016D06+           CGGTCGGTGGACCAATGGAGGTAGAGTGGGTGCAGGAGAAGCTTCTGCCAGTAATCCGAG
JMFS007E09+           CGGTCGGTGGACCAATGGAGGTAGAGTGGGTGCAGGAGAAGCTTCTGCCAGTAATCCGAG
                      ____________________________________________________________
consensus             CGGTCGGTGGACCAATGGAGGTAGAGTGGGTGCAGGAGAAGCTTCTGCCAGTAATCCGAG
 
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JMFS020C04+           GTAAGCGGATATGATTTATCGCCGATAAACGCTCCAATTAGGTACTCCGCTGTCTCCTGC
JMFS016D06+           GTAAGCGGATATGATTTATCGCCGATAAACGCTCCAATTAGGTACTCCGCTGTCTCCTGC
JMFS007E09+           GTAAGCGGATATGATTTATCGCCGATAAACGCTCCAATTAGGTACTCCGCTGTCTCCTGC
                      ____________________________________________________________
consensus             GTAAGCGGATATGATTTATCGCCGATAAACGCTCCAATTAGGTACTCCGCTGTCTCCTGC
 
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JMFS020C04+           CGCACAGCGCCGGTGAACCGCGGCGTTGATGGCACCGCCCCCATTCACACCGCTATATAC
JMFS016D06+           CGCACAGCGCCGGTGAACCGCGGCGTTGATGGCACCGCCCCCATTCACACCGCTATATAC
JMFS007E09+           CGCACAGCGCCGGTGAACCGCGGCGTTGATGGCACCGCCCCCATTCACACCGCTATATAC
                      ____________________________________________________________
consensus             CGCACAGCGCCGGTGAACCGCGGCGTTGATGGCACCGCCCCCATTCACACCGCTATATAC
 
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JMFS020C04+           GCGTATGTATAACGAAGATATACGATATTACTGTCGGCAGAACGAAATTCAACGGATCCT
JMFS016D06+           GCGTATGTATAACGAAGATATACGATATTACTGTCGGCAGAACGAAATTCAACGGATCCT
JMFS007E09+           GCGTATGTATAACGAAGATATACGATATTACTGTCGGCAGAACGAAATTCAACGGATCCT
                      ____________________________________________________________
consensus             GCGTATGTATAACGAAGATATACGATATTACTGTCGGCAGAACGAAATTCAACGGATCCT
 
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JMFS020C04+           TCTTGCGAGTGAAGTATAAGCTCGGAATGACATTTCAGAGACGACTTGCCGGAGCTATGG
JMFS016D06+           TCTTGCGAGTGAAGTATAAGCTCGGAATGACATTTCAGAGACGACTTGCCGGAGCTATGG
JMFS007E09+           TCTTGCGAGTGAAGTATAAGCTCGGAATGACATTTCAGAGACGACTTGCCGGAGCTATGG
                      ____________________________________________________________
consensus             TCTTGCGAGTGAAGTATAAGCTCGGAATGACATTTCAGAGACGACTTGCCGGAGCTATGG
 
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JMFS020C04+           ATCTGTGTGACTGTGTATGTGAGAGAGAGAGAGAGAGAAGAGAGAAGAGAGAGA      
JMFS016D06+           ATCTGTGTGACTGTGTATGTGAGAGAGAGAGAGAGAGAAGAGAGAAGAGAGAGAGAGCTT
JMFS007E09+           ATCTGTGTGACTGTGTATGTGAGAGAGAGAGAGAGAGAAGAGAGAAGAGAGAGAGAGCTT
JMSF027M18+                TGTGACTGTGTATGTGAGAGAGAGAGAGAGAGAAGAGAGAAGAGAGAGAGAGCTT
                      ____________________________________________________________
consensus             ATCTGTGTGACTGTGTATGTGAGAGAGAGAGAGAGAGAAGAGAGAAGAGAGAGAGAGCTT
 
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JMFS016D06+           GGAAATGAAGGTTTTAGAATT                                       
JMFS007E09+           GGAAATGAAGGTTTTAGAATT                                       
JMSF027M18+           GGAAATGAAGGTTTTAGAATTTACGATCGAGGACCTTTCCCCCGAGCGAAATTCTCTTTC
                      ____________________________________________________________
consensus             GGAAATGAAGGTTTTAGAATTTACGATCGAGGACCTTTCCCCCGAGCGAAATTCTCTTTC