| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS009H12 | Sequence | 594 | 007918 (6) | gb|AAL30454.1|AF362949_1 | 7e-48 | endo-beta-1,4-glucanase precursor [Nicotiana tabacum] | |||||
| JMFS065A10 | Sequence | 589 | 007918 (6) | ref|XP_006343864.1| | 2e-75 | PREDICTED: endoglucanase 6-like [Solanum tuberosum] | |||||
| JMFS065A12 | Sequence | 618 | 007918 (6) | ref|XP_006343864.1| | 6e-85 | PREDICTED: endoglucanase 6-like [Solanum tuberosum] | |||||
| JMFS154D01 | Sequence | 613 | 007918 (6) | ref|XP_006343864.1| | 2e-96 | PREDICTED: endoglucanase 6-like [Solanum tuberosum] | |||||
| JMSF006F02 | Sequence | 412 | 007918 (6) | ref|XP_006343864.1| | 7e-27 | PREDICTED: endoglucanase 6-like [Solanum tuberosum] | |||||
| JMSF027J19 | Sequence | 552 | 007918 (6) | ref|XP_006360711.1| | 1e-36 | PREDICTED: endoglucanase 6-like [Solanum tuberosum] | 764 | 012647 (2) | gb|ABK96199.1| | 4e-30 | unknown [Populus trichocarpa] |
This contig is upended
. : . : . : . : . : . :
JMFS154D01+ GTCTCGCCGGCGAGGTCGGA
____________________________________________________________
consensus GTCTCGCCGGCGAGGTCGGA
. : . : . : . : . : . :
JMFS154D01+ TCCGGGGTGGCTGGGGTCGATCTTGTAGGCGGTTCTTGAAGTGGTCATGTCTTCCGGCCT
JMFS065A12+ GGTTCTTGAAGTGGTCATGTCTTCCGGCCT
____________________________________________________________
consensus TCCGGGGTGGCTGGGGTCGATCTTGTAGGCGGTTCTTGAAGTGGTCATGTCTTCCGGCCT
. : . : . : . : . : . :
JMFS154D01+ TTGCCAACAATAGTGGTCGGTGTTCCCATCCCCCACCTCTCCATAAAGGACATCAGGTTG
JMFS065A12+ TTGCCAACAATAGTGGTCGGTGTTCCCATCCCCCACCTCTCCATAAAGGACATCAGGTTG
JMFS065A10+ CAACAATAGTGGTCGGTGTTCCCATCCCCCACCTCTCCATAAAGGACATCAGGTTG
____________________________________________________________
consensus TTGCCAACAATAGTGGTCGGTGTTCCCATCCCCCACCTCTCCATAAAGGACATCAGGTTG
. : . : . : . : . : . :
JMFS154D01+ AGGGTGAGCTTTGATGAGATAATCAGTGCCCCACTTGATAGCATCCATGGCGTGGCTAAG
JMFS065A12+ AGGGTGAGCTTTGATGAGATAATCAGTGCCCCACTTGATAGCATCCATGGCGTGGCTAAG
JMFS065A10+ AGGGTGAGCTTTGATGAGATAATCAGTGCCCCACTTGATAGCATCCATGGCGTGGCTAAG
JMFS009H12+ AGATAATCAGTGCCCCACTTGATAGCATCCATGGCG-GGCTAAG
____________________________________________________________
consensus AGGGTGAGCTTTGATGAGATAATCAGTGCCCCACTTGATAGCATCCATGGCGTGGCTAAG
. : . : . : . : . : . :
JMFS154D01+ CTGCCCACTGGCACCCATTTGCCTTCCATATTCTATGATGCTCCACGACATCATGGTAAC
JMFS065A12+ CTGCCCACTGGCACCCATTTGCCTTCCATATTCTATGATGCTCCACGACATCATGGTAAC
JMFS065A10+ CTGCCCACTGGCACCCATTTGCCTTCCATATTCTATGATGCTCCACGACATCATGGTAAC
JMFS009H12+ CTGCCCACTGGCACCCATTTGCCTTCCATATTCTATGATGCTCCACGACATCATGGTAAC
JMSF027J19+ CATCATGGTAAC
____________________________________________________________
consensus CTGCCCACTGGCACCCATTTGCCTTCCATATTCTATGATGCTCCACGACATCATGGTAAC
. : . : . : . : . : . :
JMFS154D01+ GGTGAACGCCATTGGAAGCCCAAATTTCACGTTGTCCCCGGCATCATAGTACCCTCCAAT
JMFS065A12+ GGTGAACGCCATTGGAAGCCCAAATTTCACGTTGTCCCCGGCATCATAGTACCCTCCAAT
JMFS065A10+ GGTGAACGCCATTGGAAGCCCAAATTTCACGTTGTCCCCGGCATCATAGTACCCTCCAAT
JMSF006F02+ TTCACGTTGTCCCNGGCATCATAGTACCCTCCAAT
JMFS009H12+ GGTGAACGCCATTGGAAGCCCAAATTTCACGTTGTCCCCGGCATCATAGTACCCTCCAAT
JMSF027J19+ GGTGANCGCCATTGGAAGCCCAAATTTCACGTTGTCCCCGGCATCATAGTACCCTCCAAT
____________________________________________________________
consensus GGTGAACGCCATTGGAAGCCCAAATTTCACGTTGTCCCCGGCATCATAGTACCCTCCAAT
. : . : . : . : . : . :
JMFS154D01+ CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
JMFS065A12+ CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
JMFS065A10+ CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
JMSF006F02+ CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
JMFS009H12+ CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
JMSF027J19+ CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
____________________________________________________________
consensus CAGATCCACCCCACTAGCTTTGCCATCAAGGAGCCCAGAATTTCCCCTCCATTGAACTCT
. : . : . : . : . : . :
JMFS154D01+ CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
JMFS065A12+ CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
JMFS065A10+ CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
JMSF006F02+ CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
JMFS009H12+ CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
JMSF027J19+ CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
____________________________________________________________
consensus CTGGGTATGGGGGAGATACCCAGATCTCTGAGCTTCATAGAACAGGAAGCTCTTGCTCAG
. : . : . : . : . : . :
JMFS154D01+ AGCTTCAGCATAATCATGGCCGCCCATTGCCACACAAGGAAGAACAACCACAACCCCCAC
JMFS065A12+ AGCTTCAGCATAATCATGGCCGCCCATTGCCACACAAGGAAGAACAACCACAACCCCCAC
JMFS065A10+ AGCTTCAGCATAATCATGGCCGCCCATTGCCACACAAGGAAGAACAACCACAACCCCCAC
JMSF006F02+ AGCTTCAGCATAATCATGGCCGCCCATTGCCACACAAGGAAGAACAACCACAACCCCCAC
JMFS009H12+ AGCTTCAGCATAATCATGGCCGCCCATTGCCACACAAGGAAGAACAACCACAACCCCCAC
JMSF027J19+ AGCTTCAGCATAATCATGGCCGCCCATTGCCNCACAAGGAAGAACAACCACAACCCCCAC
____________________________________________________________
consensus AGCTTCAGCATAATCATGGCCGCCCATTGCCACACAAGGAAGAACAACCACAACCCCCAC
. : . : . : . : . : . :
JMFS154D01+ CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
JMFS065A12+ CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
JMFS065A10+ CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
JMSF006F02+ CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
JMFS009H12+ CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
JMSF027J19+ CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
____________________________________________________________
consensus CAACAAAAACACAATTCTCTCCATACTTCTTAAACCAGATCTGTTCTGTAAGGCTATATA
. : . : . : . : . : . :
JMFS154D01+ TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTT
JMFS065A12+ TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTTGTTTATC
JMFS065A10+ TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTTGTTTATC
JMSF006F02+ TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTTGTTTATC
JMFS009H12+ TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTTGTTTATC
JMSF027J19+ TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTTGTTTATC
____________________________________________________________
consensus TAGCAGTATATGTATATATATGTGTGTATGAACAAAATGGCTAATGCTGCTTTGTTTATC
. : . : . : . : . : . :
JMFS065A12+ AGCTAAAACTTGTGATAAACTCCACAAAGAACAGAGCAGAGAAAGGGA
JMFS065A10+ AGCTAAAACTTGTGATAAACTCCACAAAGAACAGAGCAGAGAAAGGGAGAAAA
JMSF006F02+ AGCTAAAACTTGTGATAAACTCCACAAAGAACAGAGCAGAGAAAGGGAGAAAAGAGAGAA
JMFS009H12+ AGCTAAAACTTGTGATAAACTCCACAAAGAACAGAGCAGAGAAAGGGAGAAAAGAGAGAA
JMSF027J19+ AGCTAAAACTTGTGATAAACTCCACAAAGAACAGAGCAGAGAAAGGGAGAAAAGAGAGAA
____________________________________________________________
consensus AGCTAAAACTTGTGATAAACTCCACAAAGAACAGAGCAGAGAAAGGGAGAAAAGAGAGAA
. : . : . : . : . : . :
JMSF006F02+ AGAGGAGGCTGGGA
JMFS009H12+ AGAGGAGGCTGGGATTGAGGGAAGAAGATGGAGCTTGAGTTTACTATATATGGTGGAGGG
JMSF027J19+ AGAGGAGGCTGGGATTGAGGGAAGAAGATGGAGCTTGAGTTTACTATATATGGTGGAGGG
____________________________________________________________
consensus AGAGGAGGCTGGGATTGAGGGAAGAAGATGGAGCTTGAGTTTACTATATATGGTGGAGGG
. : . : . : . : . : . :
JMFS009H12+ AGTAGGATGGT
JMSF027J19+ AGTAGGATGGTGCCAATACAGCAGAATGGTAAGTGATCTAACAAATTTCAAAATCTTATC
____________________________________________________________
consensus AGTAGGATGGTGCCAATACAGCAGAATGGTAAGTGATCTAACAAATTTCAAAATCTTATC