Contig 007914:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046C09+                                                   CAAAATGAACGCCTAGTTGT
                      ____________________________________________________________
consensus                                                     CAAAATGAACGCCTAGTTGT
 
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JMSF046C09+           ACTTAAAACTACTGGTGAAGTTGCAAGATGTCAGTCTCATAACCTGTGCTAGCGTTTGAA
                      ____________________________________________________________
consensus             ACTTAAAACTACTGGTGAAGTTGCAAGATGTCAGTCTCATAACCTGTGCTAGCGTTTGAA
 
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JMSF046C09+           CAGGGCCTCACACAATTCAGGTTCCTCCAACATTGCCTAAAACAGGGGCCTCCTCAGTGC
                      ____________________________________________________________
consensus             CAGGGCCTCACACAATTCAGGTTCCTCCAACATTGCCTAAAACAGGGGCCTCCTCAGTGC
 
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JMSF046C09+           TTCCTTTTCCGTTCTCTTGAGATGAAGTATCAGACTCGGATTGTGAAAACCTGAGAGCTC
                      ____________________________________________________________
consensus             TTCCTTTTCCGTTCTCTTGAGATGAAGTATCAGACTCGGATTGTGAAAACCTGAGAGCTC
 
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JMSF046C09+           TTGCTTTCCTTTTATCTTCCTCCACAGGATCAACCTTTGTCAGTGGTGCAAACCTAGCAA
JMSF027I04+                               TCCACAGGATCAACCTTTGTCAGTGGTGCAAACCTAGCAA
JMSF030K24+                               TCCACAGGATCAACCTTTGTCAGTGGTGCAAACCTAGCAA
                      ____________________________________________________________
consensus             TTGCTTTCCTTTTATCTTCCTCCACAGGATCAACCTTTGTCAGTGGTGCAAACCTAGCAA
 
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JMSF046C09+           GCCTTGCCTTCTTCTTTGCATCCTCATCAGTAGTGGTAGTTTGAGCAAGCCCAAACCTCT
JMSF027I04+           GCCTTGCCTTCTTCTTTGCATCCTCATCAGTAGTGGTAGTTTGAGCAAGCCCAAACCTCT
JMSF030K24+           GCCTTGCCTTCTTCTTTGCATCCTCATCAGTAGTGGTAGTTTGAGCAAGCCCAAACCTCT
JMSF027B09+                               TCCTCATCAGTAGTGGTAGTTTGAGCAAGCCCAAACCTCT
                      ____________________________________________________________
consensus             GCCTTGCCTTCTTCTTTGCATCCTCATCAGTAGTGGTAGTTTGAGCAAGCCCAAACCTCT
 
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JMSF046C09+           CTGCCCTAGCCTTCCTCTTCAGTTCCTCTGATTTCTTTGATGAATCTGATCCAGGTAATG
JMSF027I04+           CTGCCCTAGCCTTCCTCTTCAGTTCCTCTGATTTCTTTGATGAATCTGATCCAGGTAATG
JMSF030K24+           CTGCCCTAGCCTTCCTCTTCAGTTCCTCTGATTTCTTTGATGAATCTGATCCAGGTAATG
JMSF027B09+           CTGCCCTAGCCTTCCTCTTCAGTTCCTCTGATTTCTTTGATGAATCTGATCCAGGTAATG
                      ____________________________________________________________
consensus             CTGCCCTAGCCTTCCTCTTCAGTTCCTCTGATTTCTTTGATGAATCTGATCCAGGTAATG
 
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JMSF046C09+           AGGATGCAGTGCCAA------ACCTTTCAGCTCTCGAATTCCGCTTTTCTTCTTCAGACA
JMSF027I04+           AGGATGCAGTGCCAA------ACCTTTCAGCTCTCGAATTCCGCTTTTCTTCTTCAGACA
JMSF030K24+           AGGATGCAGTGCCAA------ACCTTTCAGCTCTCGAATTCCGCTTTTCTTCTTCAGACA
JMSF027B09+           AGGATGCAGTGCCAAACCCGTACCTTTCAGCTCTCGAATTCCGCTTTTCTTCTTCAGACA
                      ____________________________________________________________
consensus             AGGATGCAGTGCCAA------ACCTTTCAGCTCTCGAATTCCGCTTTTCTTCTTCAGACA
 
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JMSF046C09+           GCTGCACTGGCATTCCGAACCTCTCCGCGCGCTTAATCTTCTTTTGAACGTCGAATGAAA
JMSF027I04+           GCTGCACTGGCATTCCGAACCTCTCCGCGCGCTTAATCTTCTTTTGAACGTCGAATGAAA
JMSF030K24+           GCTGCACTGGCATTCCGAACCTCTCCGCGCGCTTAATCTTCTTTTGAACGTCGAATGAAA
JMSF027B09+           GCTGCACTGGCATTCCGAACCTCTCCGCGCGCTTAATCTTCTTTTGAACGTCGAATGAAA
                      ____________________________________________________________
consensus             GCTGCACTGGCATTCCGAACCTCTCCGCGCGCTTAATCTTCTTTTGAACGTCGAATGAAA
 
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JMSF046C09+           TGTCGCTGCTTACGTTGTTGACCGCCGTCGTGGTGGCGGTGGTGGCCGCCGCCTTGTGTT
JMSF027I04+           TGTCGCTGCTTACGTTGTTGACCGCCGTCGTGGTGGCGGTGGTGGCCGCCGCCTTGTGTT
JMSF030K24+           TGTCGCTGCTTACGTTGTTGACCGCCGTCGTGGTGGCGGTGGTGGCCGCCGCCTTGTGTT
JMSF027B09+           TGTCGCTGCTTACGTTGTTGACCGCCGTCGTGGTGGCGGTGGTGGCCGCCGCCTTGTGTT
                      ____________________________________________________________
consensus             TGTCGCTGCTTACGTTGTTGACCGCCGTCGTGGTGGCGGTGGTGGCCGCCGCCTTGTGTT
 
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JMSF046C09+           CGCCCTTTGATGGTGAGGTCGAAGGGTTAGGGTTTGTGAGGTGAGAAGCCTCGGCGTCCG
JMSF027I04+           CGCCCTTTGATGGTGAGGTCGAAGGGTTAGGGTTTGTGAGGTGAGAAGCCTCGGCGTCCG
JMSF030K24+           CGCCCTTTGATGGTGAGGTCGAAGGGTTAGGGTTTGTGAGGTGAGAAGCCTCGGCGTCCG
JMSF027B09+           CGCCCTTTGATGGTGAGGTCGAAGGGTTAGGGTTTGTGAGGCGAGAAGCCTCGGCGTCCG
                      ____________________________________________________________
consensus             CGCCCTTTGATGGTGAGGTCGAAGGGTTAGGGTTTGTGAGGTGAGAAGCCTCGGCGTCCG
 
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JMSF046C09+           CCGTCGGATTGGGATCTGACGGTTGAGATAGGGTTTTCGTGGGGACTTCGGTGTTCTTTG
JMSF027I04+           CCGTCGGATTGGGATCTGACGGTTGAGATAGGGTTTTCGTGGGGACTTCGGTGTTCTTTG
JMSF030K24+           CCGTCGGATTGGGATCTGACGGTTGAGATAGGGTTTTCGTGGGGACTTCGGTGTTCTTTG
JMSF027B09+           CCGTCGGATTGGGATCTGACGGTTGAGATAGGGTTTTCGTGGGGACTTCGGTGTTCTTTG
                      ____________________________________________________________
consensus             CCGTCGGATTGGGATCTGACGGTTGAGATAGGGTTTTCGTGGGGACTTCGGTGTTCTTTG
 
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JMSF046C09+           CGGTGGTCGTCGCCATGTGTGCGGTGGAAGGAGCAGTAGACTGATTGAAGAATGATTGCG
JMSF027I04+           CGGTGGTCGTCGCCATGTGTGCGGTGGAAGGAGCAGTAGACTGATTGAAGAATGATTGCG
JMSF030K24+           CGGTGGTCGTCGCCATGTGTGCGGTGGAAGGAGCAGTAGACTGATTGAAGAATGATTGCG
JMSF027B09+           CGGTGGTCGTCGCCATGTGTGCGGTGGAAGGAGCAGTAGACTGATTGAAGAATGATTGCG
                      ____________________________________________________________
consensus             CGGTGGTCGTCGCCATGTGTGCGGTGGAAGGAGCAGTAGACTGATTGAAGAATGATTGCG
 
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JMSF046C09+           CTGCTGCAATGGTATCGTTGGGTGAGAATTCCGCGGACAAAACGTGAGAGCGCTTTAAGA
JMSF027I04+           CTGCTGCAATGGTATCGTTGGGTGAGAATTCCGCGGACAAAACGTGAGAGCGCTTTAAGA
JMSF030K24+           CTGCTGCAATGGTATCGTTGGGTGAGAATTCCGCGGACAAAACGTGAGAGCGCTTTAAGA
JMSF027B09+           CTGCTGCAATGGTATCGTTGGGTGAGAATTCCGCGGACAAAACGTGAGAGCGCTTTAAGA
                      ____________________________________________________________
consensus             CTGCTGCAATGGTATCGTTGGGTGAGAATTCCGCGGACAAAACGTGAGAGCGCTTTAAGA
 
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JMSF046C09+           TTCCGGACTTGTGTAAGCTCTTGACCC                                 
JMSF027I04+           TTCCGGACTT                                                  
JMSF030K24+           TTCCGGACTTGTGTAAGCTCTTGACCC                                 
JMSF027B09+           TTCCGGACTTGTGTAAGCTCTTGACCCTCTGGTTTTTGGTACTTTTAGCCCAGCCGATTC
                      ____________________________________________________________
consensus             TTCCGGACTTGTGTAAGCTCTTGACCCTCTGGTTTTTGGTACTTTTAGCCCAGCCGATTC