Contig 007910:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026E07Sequence627007910 (2)768007910 (2)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-                                                                ATTTGA
                      ____________________________________________________________
consensus                                                                   ATTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TATACAAGAGTTGATTATACAGAACCCAACTTTGCCAACATTTTGCCCACAAAGTTGTAC
                      ____________________________________________________________
consensus             TATACAAGAGTTGATTATACAGAACCCAACTTTGCCAACATTTTGCCCACAAAGTTGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          AAGCTGTTTCTCTATCCATACTTCTCATATTCAAAAGCATTCATAGAACTTTTTGCAGAT
                      ____________________________________________________________
consensus             AAGCTGTTTCTCTATCCATACTTCTCATATTCAAAAGCATTCATAGAACTTTTTGCAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TCATAAACTAAATAGTGAATTAAACAAAAAATGAAGAAAAAGAAGAAGGAATTATAATAA
                      ____________________________________________________________
consensus             TCATAAACTAAATAGTGAATTAAACAAAAAATGAAGAAAAAGAAGAAGGAATTATAATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TAATTTGAGCTGCAGTAGAAATGGTATATTATACAGTTTCATTTGGCTGCAGGATCTTCT
                      ____________________________________________________________
consensus             TAATTTGAGCTGCAGTAGAAATGGTATATTATACAGTTTCATTTGGCTGCAGGATCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          GTGTTACTTCCTTCGGTTTGTATTTCCGGAAGGGTTTCGAGATCAGTGCGTACATCTTTC
                      ____________________________________________________________
consensus             GTGTTACTTCCTTCGGTTTGTATTTCCGGAAGGGTTTCGAGATCAGTGCGTACATCTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TCGTCCAGGGAAAACGACGAATCGGAGGAGTCAATCAGATCTTCGATTTCACCTATATTC
                      ____________________________________________________________
consensus             TCGTCCAGGGAAAACGACGAATCGGAGGAGTCAATCAGATCTTCGATTTCACCTATATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TCAGTATTGAAGGACTCGAACTCTTCGTCTGCTCTGCCTGTTTCATCAACTGTTCGAGAT
                      ____________________________________________________________
consensus             TCAGTATTGAAGGACTCGAACTCTTCGTCTGCTCTGCCTGTTTCATCAACTGTTCGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TTCTCAGCATCAGTATCGATTGTCGTGGACCATCGGTCATCCTCGGTTGTGAACCGAGGA
                      ____________________________________________________________
consensus             TTCTCAGCATCAGTATCGATTGTCGTGGACCATCGGTCATCCTCGGTTGTGAACCGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TGACCATGTATGACCTTCTCCGAGACAGAAGATTTCGAGTGATTAGATTCAGCTGAGGAA
                      ____________________________________________________________
consensus             TGACCATGTATGACCTTCTCCGAGACAGAAGATTTCGAGTGATTAGATTCAGCTGAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TCTGATTCGGTTGATTCTGCATCCCCGTTTTTTAAGGTTGTTAAATTAGACTCAGAGAGA
                      ____________________________________________________________
consensus             TCTGATTCGGTTGATTCTGCATCCCCGTTTTTTAAGGTTGTTAAATTAGACTCAGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          CTATTATTGACAACCAAAGCAGAATCATCTCTTTTCTGGATGGATAAATCATTTGCCTCC
JMSF026E07+                                                GGATGGATAAATCATTTGCCTCC
                      ____________________________________________________________
consensus             CTATTATTGACAACCAAAGCAGAATCATCTCTTTTCTGGATGGATAAATCATTTGCCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          CCGGTTTTCTCGGTCAAATTTCTTTCCACGGGATGACCATTTAACCCTTCCGAGACATGC
JMSF026E07+           CCGGTTTTCTCGGTCAAATTTCTTTCCACGGGATGACCATTTAACCCTTCCGAGACATGC
                      ____________________________________________________________
consensus             CCGGTTTTCTCGGTCAAATTTCTTTCCACGGGATGACCATTTAACCCTTCCGAGACATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026E07-          TCAGATTCTTCGTGGCCTATNGTGTCTTGACCATCGCTAATT                  
JMSF026E07+           TCAGATTCTTCGTGGCCTATTGTGTCTTGACCATCGCTAATTTTGTTGTCGTTATTGACT
                      ____________________________________________________________
consensus             TCAGATTCTTCGTGGCCTATTGTGTCTTGACCATCGCTAATTTTGTTGTCGTTATTGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           ACTCCTGCCTGTTCCAGAACATTTACCTCAGCGTTCTCGCTTACTTCCTCGATGCTATCA
                      ____________________________________________________________
consensus             ACTCCTGCCTGTTCCAGAACATTTACCTCAGCGTTCTCGCTTACTTCCTCGATGCTATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           TGAGTTACTGCACTTGAAGCATCGTCTGCTTTATATAGTACCTCTTGTGCCTCGTGCTTA
                      ____________________________________________________________
consensus             TGAGTTACTGCACTTGAAGCATCGTCTGCTTTATATAGTACCTCTTGTGCCTCGTGCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           CTCCCCGAATCCTCATCGTTTTCATTGTCCTCGGAAATCTCGTCCCCGTTATTATCATCA
                      ____________________________________________________________
consensus             CTCCCCGAATCCTCATCGTTTTCATTGTCCTCGGAAATCTCGTCCCCGTTATTATCATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           GAATCTCGCTCCTCACTCTCCTTCTCATCATCACCCACCGCTTTGTCTTCTCGTTCAACC
                      ____________________________________________________________
consensus             GAATCTCGCTCCTCACTCTCCTTCTCATCATCACCCACCGCTTTGTCTTCTCGTTCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           TCGCCATCATTTTTCTCCCGATCGTGTTCTTCTAAATCGTCATCTCCACCTCCTCTACCA
                      ____________________________________________________________
consensus             TCGCCATCATTTTTCTCCCGATCGTGTTCTTCTAAATCGTCATCTCCACCTCCTCTACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           TCTTCTTCCAGGTTGTTATCTTCCGTGCCACTATTAGCCATTCCCTTCGAATCGGGGAGG
                      ____________________________________________________________
consensus             TCTTCTTCCAGGTTGTTATCTTCCGTGCCACTATTAGCCATTCCCTTCGAATCGGGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           TATTTTCGTCCTAAATTTGGACCTCCATCGCTGCTGCTTCCCGTTTTCTGAGACAAACTC
                      ____________________________________________________________
consensus             TATTTTCGTCCTAAATTTGGACCTCCATCGCTGCTGCTTCCCGTTTTCTGAGACAAACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E07+           GACTCGTTCCCATCAAACTGTTTCTTCTTCTCGTGGGACTGTTTCACTTGGTAAACCAGC
                      ____________________________________________________________
consensus             GACTCGTTCCCATCAAACTGTTTCTTCTTCTCGTGGGACTGTTTCACTTGGTAAACCAGC