Contig 007909:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004N22Sequence537007909 (3)ref|XP_006340200.1|2e-16PREDICTED: protein disulfide isomerase-like 1-4-like [Solanum tuberosum]789013764 (3)gb|KHG16937.1|3e-109Protein disulfide isomerase-like 1-4 [Gossypium arboreum]
JMFF035N21Sequence549007909 (3)ref|XP_006340200.1|3e-11PREDICTED: protein disulfide isomerase-like 1-4-like [Solanum tuberosum]731013764 (3)gb|AAO26314.1|8e-99protein disulphide isomerase, partial [Elaeis guineensis]
JMSF026D09Sequence641007909 (3)ref|XP_006340200.1|1e-13PREDICTED: protein disulfide isomerase-like 1-4-like [Solanum tuberosum]762013764 (3)gb|KHG16937.1|5e-113Protein disulfide isomerase-like 1-4 [Gossypium arboreum]

Alignment

This contig is upended


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JMFF004N22+                                                        TCAGTCGCAGCGGCA
JMFF035N21+                                            TCTATTTTCAGTTCAGTCGCAGCGGCA
JMSF026D09+                              CAAGCGCCACATTCTCTATTTTCAGTTCAGTCGCAGCGGCA
                      ____________________________________________________________
consensus                                CAAGCGCCACATTCTCTATTTTCAGTTCAGTCGCAGCGGCA
 
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JMFF004N22+           GCGTACTCAGGCGCGAGAGCCTTACAGTGGCCGCACCAGGGTGCGTAGAACTCCACCATC
JMFF035N21+           GCGTACTCAGGCGCGAGAGCCTTACAGTGGCCGCACCAGGGTGCGTAGAACTCCACCATC
JMSF026D09+           GCGTACTCAGGCGCGAGAGCCTTACAGTGGCCGCACCAGGGTGCGTAGAACTCCACCATC
                      ____________________________________________________________
consensus             GCGTACTCAGGCGCGAGAGCCTTACAGTGGCCGCACCAGGGTGCGTAGAACTCCACCATC
 
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JMFF004N22+           ACGAACTTGTTACTGTCCACGAAGTCGCTGAAGTTCCTATCTGTCAAGACAACGACGTCC
JMFF035N21+           ACGAACTTGTTACTGTCCACGAAGTCGCTGAAGTTCCTATCTGTCAAGACAACGACGTCC
JMSF026D09+           ACGAACTTGTTACTGTCCACGAAGTCGCTGAAGTTCCTATCTGTCAAGACAACGACGTCC
                      ____________________________________________________________
consensus             ACGAACTTGTTACTGTCCACGAAGTCGCTGAAGTTCCTATCTGTCAAGACAACGACGTCC
 
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JMFF004N22+           TTATCGTCGACCTTGGGGCCGTCGTCCACTTCCTCCTCCTCCTCGCGACCGAATCCCTGC
JMFF035N21+           TTATCGTCGACCTTGGGGCCGTCGTCCACTTCCTCCTCCTCCTCGCGACCGAATCCCTGC
JMSF026D09+           TTATCGTCGACCTTGGGGCCGTCGTCCACTTCCTCCTCCTCCTCGCGACCGAATCCCTGC
                      ____________________________________________________________
consensus             TTATCGTCGACCTTGGGGCCGTCGTCCACTTCCTCCTCCTCCTCGCGACCGAATCCCTGC
 
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JMFF004N22+           GGAACCTCAAAATCGTCGTAATTGTCGAAGTCTTCATCGTCGTCCTCAGGTTCGTCGTCG
JMFF035N21+           GGAACCTCAAAATCGTCGTAATTGTCGAAGTCTTCATCGTCGTCCTCAGGTTCGTCGTCG
JMSF026D09+           GGAACCTCAAAATCGTCGTAATTGTCGAAGTCTTCATCGTCGTCCTCAGGTTCGTCGTCG
                      ____________________________________________________________
consensus             GGAACCTCAAAATCGTCGTAATTGTCGAAGTCTTCATCGTCGTCCTCAGGTTCGTCGTCG
 
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JMFF004N22+           CTTCCGAAGTGGTGAGGATCCGATTGGTGAGTGTGCTTCGCTGCGCCATCGTTCTCGTCG
JMFF035N21+           CTTCCGAAGTGGTGAGGATCCGATTGGTGAGTGTGCTTCGCTGCGCCATCGTTCTCGTCG
JMSF026D09+           CTTCCGAAGTGGTGAGGATCCGATTGGTGAGTGTGCTTCGCTGCGCCATCGTTCTCGTCG
                      ____________________________________________________________
consensus             CTTCCGAAGTGGTGAGGATCCGATTGGTGAGTGTGCTTCGCTGCGCCATCGTTCTCGTCG
 
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JMFF004N22+           TCGGATTCGAGGAAGCTGAGGTCTTCGTCGTCATCGTCGGTGGCGGCGGTTTTGGCCAGA
JMFF035N21+           TCGGATTCGAGGAAGCTGAGGTCTTCGTCGTCATCGTCGGTGGCGGCGGTTTTGGCCAGA
JMSF026D09+           TCGGATTCGAGGAAGCTGAGGTCTTCGTCGTCATCGTCGGTGGCGGCGGTTTTGGCCAGA
                      ____________________________________________________________
consensus             TCGGATTCGAGGAAGCTGAGGTCTTCGTCGTCATCGTCGGTGGCGGCGGTTTTGGCCAGA
 
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JMFF004N22+           GACGGAGAAGCTAATAGGGAGAAGAGTAGAAGAGAGGAGAGAGTGAGGAGAATGAGCTGA
JMFF035N21+           GACGGAGAAGCTAATAGGGAGAAGAGTAGAAGAGAGGAGAGAGTGAGGAGAATGAGCTGA
JMSF026D09+           GACGGAGAAGCTAATAGGGAGAAGAGTAGAAGAGAGGAGAGAGTGAGGAGAATGAGCTGA
                      ____________________________________________________________
consensus             GACGGAGAAGCTAATAGGGAGAAGAGTAGAAGAGAGGAGAGAGTGAGGAGAATGAGCTGA
 
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JMFF004N22+           CGCGGCATAATTAGATGACGAGTTGACTCAGTTTTGACTATCGGCAATCGGAGTAAGAAT
JMFF035N21+           CGCGGCATAATTAGATGACGAGTTGACTCAGTTTTGACTATCGGCAATCGGAGTAAGAAT
JMSF026D09+           CGCGGCATAATTAGATGACGAGTTGACTCAGTTTTGACTATCGGCAATCGGAGTAAGAAT
                      ____________________________________________________________
consensus             CGCGGCATAATTAGATGACGAGTTGACTCAGTTTTGACTATCGGCAATCGGAGTAAGAAT
 
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JMFF004N22+           GTAAGATCGACTGTGAACTGTGAAGTGTGAGATCTGATAC                    
JMFF035N21+           GTAAGATCGACTGTGAACTGTGAAGTGTGAGATCTGATAC                    
JMSF026D09+           GTAAGATCGACTGTGAACTGTGAAGTGTGAGATCTGATACGGAGGTTGTCAGTTGAGGAG
                      ____________________________________________________________
consensus             GTAAGATCGACTGTGAACTGTGAAGTGTGAGATCTGATACGGAGGTTGTCAGTTGAGGAG
 
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JMSF026D09+           GTGGGAACGGCGTATGGGGATCGAATCGAAGAGGAAACAAGAAACGATGCCGTTCTGATC
                      ____________________________________________________________
consensus             GTGGGAACGGCGTATGGGGATCGAATCGAAGAGGAAACAAGAAACGATGCCGTTCTGATC