Contig 007906:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018E07Sequence317013279 (5)781007906 (5)emb|CDP13182.1|5e-70unnamed protein product [Coffea canephora]
JMSF019H22Sequence519013279 (5)783007906 (5)emb|CDP13182.1|2e-82unnamed protein product [Coffea canephora]
JMSF025I17Sequence464007906 (5)emb|CDP13182.1|6e-28unnamed protein product [Coffea canephora]395007906 (5)emb|CDP13182.1|3e-28unnamed protein product [Coffea canephora]
JMSF037D13Sequence646013279 (5)ref|XP_006438334.1|1e-05hypothetical protein CICLE_v10032055mg [Citrus clementina] ref|XP_006483893.1| P759007906 (5)emb|CDP13182.1|6e-90unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF018E07+                           CTTAGGATTGCTGCACTTCATGATCATCGTTACTAAAAGATCT
                      ____________________________________________________________
consensus                              CTTAGGATTGCTGCACTTCATGATCATCGTTACTAAAAGATCT
 
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rJMSF018E07+          CATTAGCCGGATTTCCAATCGTTTTGTGTGCTTAAATAATTACTGTGCAAAATGCTGGGA
                      ____________________________________________________________
consensus             CATTAGCCGGATTTCCAATCGTTTTGTGTGCTTAAATAATTACTGTGCAAAATGCTGGGA
 
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rJMSF018E07+          GAAAACAACAACAATAACACGCTTCCTGTTTTCCTCAACGAGAACGCCTTCCAGTACCCT
                      ____________________________________________________________
consensus             GAAAACAACAACAATAACACGCTTCCTGTTTTCCTCAACGAGAACGCCTTCCAGTACCCT
 
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rJMSF037D13+                                               GAAGAAACTCTGACAAAAGGGCT
rJMSF018E07+          ACTAACACATCAAATCAGCTGCAGTTATTTGGAAACTGAAGAAACTCTGACAAAAGGGCT
rJMSF019H22+                                               GAAGAAACTCTGACAAAAGGGCT
                      ____________________________________________________________
consensus             ACTAACACATCAAATCAGCTGCAGTTATTTGGAAACTGAAGAAACTCTGACAAAAGGGCT
 
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rJMSF037D13+          TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
rJMSF018E07+          TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
rJMSF019H22+          TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
                      ____________________________________________________________
consensus             TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
 
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rJMSF037D13+          CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
rJMSF018E07+          CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
rJMSF019H22+          CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
                      ____________________________________________________________
consensus             CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
 
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rJMSF037D13+          TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
rJMSF018E07+          TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
rJMSF019H22+          TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
                      ____________________________________________________________
consensus             TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
 
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rJMSF037D13+          CAACGAGTCTGTAGCTACGATGCTGAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
rJMSF018E07+          CAACGAGTCTGTAGCTACGATGCTGAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
rJMSF019H22+          CAACGAGTCTGTAGCTACGATGCTGAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
rJMSF025I17+                           CGATGCTTAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
JMSF025I17-                            CGATGCTTAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
                      ____________________________________________________________
consensus             CAACGAGTCTGTAGCTACGATGCTTAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
 
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rJMSF037D13+          CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
rJMSF018E07+          CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
rJMSF019H22+          CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
rJMSF025I17+          CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
JMSF025I17-           CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
                      ____________________________________________________________
consensus             CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
 
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rJMSF037D13+          GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
rJMSF018E07+          GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
rJMSF019H22+          GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
rJMSF025I17+          GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
JMSF025I17-           GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
                      ____________________________________________________________
consensus             GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
 
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rJMSF037D13+          ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
rJMSF018E07+          ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
rJMSF019H22+          ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
rJMSF025I17+          ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
JMSF025I17-           ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
                      ____________________________________________________________
consensus             ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
 
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rJMSF037D13+          CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
rJMSF018E07+          CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
rJMSF019H22+          CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
rJMSF025I17+          CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
JMSF025I17-           CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
                      ____________________________________________________________
consensus             CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
 
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rJMSF037D13+          TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
rJMSF018E07+          TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
rJMSF019H22+          TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
rJMSF025I17+          TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
JMSF025I17-           TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
                      ____________________________________________________________
consensus             TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
 
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rJMSF037D13+          TATCATCAACCAAACCAT                                          
rJMSF018E07+          TATCATCAACCAAACCAT                                          
rJMSF019H22+          TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATTTAACCTGAA
rJMSF025I17+          TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATT         
JMSF025I17-           TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATTTAACTTGAA
                      ____________________________________________________________
consensus             TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATTTAACTTGAA
 
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rJMSF019H22+          AAAC                                                        
JMSF025I17-           AAACAATGGTGTGAGTGAAAGGTGTGGAATAGTAAACAAGCTTTCTTGATNAAAAAAAAA
                      ____________________________________________________________
consensus             AAACAATGGTGTGAGTGAAAGGTGTGGAATAGTAAACAAGCTTTCTTGATNAAAAAAAAA