Contig 007906:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018E07Sequence317013279 (5)781007906 (5)emb|CDP13182.1|5e-70unnamed protein product [Coffea canephora]
JMSF019H22Sequence519013279 (5)783007906 (5)emb|CDP13182.1|2e-82unnamed protein product [Coffea canephora]
JMSF025I17Sequence464007906 (5)emb|CDP13182.1|6e-28unnamed protein product [Coffea canephora]395007906 (5)emb|CDP13182.1|3e-28unnamed protein product [Coffea canephora]
JMSF037D13Sequence646013279 (5)ref|XP_006438334.1|1e-05hypothetical protein CICLE_v10032055mg [Citrus clementina] ref|XP_006483893.1| P759007906 (5)emb|CDP13182.1|6e-90unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018E07+ CTTAGGATTGCTGCACTTCATGATCATCGTTACTAAAAGATCT
                      ____________________________________________________________
consensus CTTAGGATTGCTGCACTTCATGATCATCGTTACTAAAAGATCT
 
. : . : . : . : . : . :
rJMSF018E07+ CATTAGCCGGATTTCCAATCGTTTTGTGTGCTTAAATAATTACTGTGCAAAATGCTGGGA
                      ____________________________________________________________
consensus CATTAGCCGGATTTCCAATCGTTTTGTGTGCTTAAATAATTACTGTGCAAAATGCTGGGA
 
. : . : . : . : . : . :
rJMSF018E07+ GAAAACAACAACAATAACACGCTTCCTGTTTTCCTCAACGAGAACGCCTTCCAGTACCCT
                      ____________________________________________________________
consensus GAAAACAACAACAATAACACGCTTCCTGTTTTCCTCAACGAGAACGCCTTCCAGTACCCT
 
. : . : . : . : . : . :
rJMSF037D13+ GAAGAAACTCTGACAAAAGGGCT
rJMSF018E07+ ACTAACACATCAAATCAGCTGCAGTTATTTGGAAACTGAAGAAACTCTGACAAAAGGGCT
rJMSF019H22+ GAAGAAACTCTGACAAAAGGGCT
                      ____________________________________________________________
consensus ACTAACACATCAAATCAGCTGCAGTTATTTGGAAACTGAAGAAACTCTGACAAAAGGGCT
 
. : . : . : . : . : . :
rJMSF037D13+ TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
rJMSF018E07+ TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
rJMSF019H22+ TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
                      ____________________________________________________________
consensus TCGGGAGATAAAGCGTAGACACATGGCTTCATTTCTGGGTGTGATGCAGAAAGGCATTAG
 
. : . : . : . : . : . :
rJMSF037D13+ CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
rJMSF018E07+ CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
rJMSF019H22+ CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
                      ____________________________________________________________
consensus CAATAAGCTGCACGAGAAGGATGTTGAGCTCGAGAACATAAACCGGAAAAACAAGGAACT
 
. : . : . : . : . : . :
rJMSF037D13+ TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
rJMSF018E07+ TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
rJMSF019H22+ TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
                      ____________________________________________________________
consensus TATCGACAGAATCAAGCAAACGGCTTCAGAAGCCCAGAACTGGTGCTACAGGGCGAAGTA
 
. : . : . : . : . : . :
rJMSF037D13+ CAACGAGTCTGTAGCTACGATGCTGAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
rJMSF018E07+ CAACGAGTCTGTAGCTACGATGCTGAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
rJMSF019H22+ CAACGAGTCTGTAGCTACGATGCTGAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
rJMSF025I17+ CGATGCTTAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
JMSF025I17- CGATGCTTAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
                      ____________________________________________________________
consensus CAACGAGTCTGTAGCTACGATGCTTAAAGCCAACCTCCAACGTGCAATGCACAGCGCGGA
 
. : . : . : . : . : . :
rJMSF037D13+ CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
rJMSF018E07+ CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
rJMSF019H22+ CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
rJMSF025I17+ CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
JMSF025I17- CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
                      ____________________________________________________________
consensus CCAAGCCAAGGAAGGGTTTGGGGACAGCGAGATGGAGATGGACGATGCTACCTCCGGCGG
 
. : . : . : . : . : . :
rJMSF037D13+ GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
rJMSF018E07+ GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
rJMSF019H22+ GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
rJMSF025I17+ GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
JMSF025I17- GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
                      ____________________________________________________________
consensus GGTCCACCCCAAGTTCGGCCTAAGCGTCGGGGCGGGGGGTGGTGGGAGTCCCGCAAAACC
 
. : . : . : . : . : . :
rJMSF037D13+ ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
rJMSF018E07+ ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
rJMSF019H22+ ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
rJMSF025I17+ ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
JMSF025I17- ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
                      ____________________________________________________________
consensus ACCACCACAACAAGCGAGGGAGTTGTTGATTTGCAGAGGCTGCAAATCGAAGGAGGTATC
 
. : . : . : . : . : . :
rJMSF037D13+ CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
rJMSF018E07+ CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
rJMSF019H22+ CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
rJMSF025I17+ CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
JMSF025I17- CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
                      ____________________________________________________________
consensus CATCTTATTGTTGCCTTGCAGGCACCTGTGTTTGTGTGTAGATTGTGAGGGGTCGGTGAG
 
. : . : . : . : . : . :
rJMSF037D13+ TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
rJMSF018E07+ TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
rJMSF019H22+ TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
rJMSF025I17+ TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
JMSF025I17- TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
                      ____________________________________________________________
consensus TGTCTGCCCCGTGTGCCAAATGGTTACGGCCACTACTGTCCGGGTTTATCTGTCTTGAAA
 
. : . : . : . : . : . :
rJMSF037D13+ TATCATCAACCAAACCAT
rJMSF018E07+ TATCATCAACCAAACCAT
rJMSF019H22+ TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATTTAACCTGAA
rJMSF025I17+ TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATT
JMSF025I17- TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATTTAACTTGAA
                      ____________________________________________________________
consensus TATCATCAACCAAACCATAATACCCCTTACAGTTGAAAGAATATATATATTTAACTTGAA
 
. : . : . : . : . : . :
rJMSF019H22+ AAAC
JMSF025I17- AAACAATGGTGTGAGTGAAAGGTGTGGAATAGTAAACAAGCTTTCTTGATNAAAAAAAAA
                      ____________________________________________________________
consensus AAACAATGGTGTGAGTGAAAGGTGTGGAATAGTAAACAAGCTTTCTTGATNAAAAAAAAA