Contig 007892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023O17Sequence646007892 (2)ref|XP_004246060.1|2e-132PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Solanum lycopersicum]747007892 (2)ref|XP_006355236.1|4e-107PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF023O17-                                                        ATGATGTAGATACA
                      ____________________________________________________________
consensus                                                           ATGATGTAGATACA
 
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rJMSF023O17-          AATAAAGTATAAACTCACAGAAAAACTTTATCCCCTCCTTCCCGTTATAGTTTCTTCAGT
                      ____________________________________________________________
consensus             AATAAAGTATAAACTCACAGAAAAACTTTATCCCCTCCTTCCCGTTATAGTTTCTTCAGT
 
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rJMSF023O17-          AGTGACGCCTAAAAGCTATGTTCTGTTCAATTACTATGCAGGACGGGAATATTAACTATG
                      ____________________________________________________________
consensus             AGTGACGCCTAAAAGCTATGTTCTGTTCAATTACTATGCAGGACGGGAATATTAACTATG
 
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rJMSF023O17-          AAGAGTTTGTAGGAATGATGAAGAAATGGGGGTAGTAGATGGTCAAGGGAAGCAGGGATA
                      ____________________________________________________________
consensus             AAGAGTTTGTAGGAATGATGAAGAAATGGGGGTAGTAGATGGTCAAGGGAAGCAGGGATA
 
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rJMSF023O17-          ATATTAATACTCTGTTGCAAATTCTTTAATTGATTTGTAAATGTGCATCAGAAGTCCAAA
                      ____________________________________________________________
consensus             ATATTAATACTCTGTTGCAAATTCTTTAATTGATTTGTAAATGTGCATCAGAAGTCCAAA
 
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rJMSF023O17-          CTTCCACACTGTTTGCTCTGCAAATTCTTGGTGCCATTAGCTTGTTTTGTATTCTTGGTA
                      ____________________________________________________________
consensus             CTTCCACACTGTTTGCTCTGCAAATTCTTGGTGCCATTAGCTTGTTTTGTATTCTTGGTA
 
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rJMSF023O17-          TGATCACTATTAAGTCCTCGGCTACGCCCAATTCCCAGTTTGGGTAAACCCCGATTTAGT
                      ____________________________________________________________
consensus             TGATCACTATTAAGTCCTCGGCTACGCCCAATTCCCAGTTTGGGTAAACCCCGATTTAGT
 
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rJMSF023O17-          CCGTCCAGCAAAACACATGCTTTACACCATTTCTGGCTGGATATGTAACCACATCGTTCG
                      ____________________________________________________________
consensus             CCGTCCAGCAAAACACATGCTTTACACCATTTCTGGCTGGATATGTAACCACATCGTTCG
 
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rJMSF023O17-          CAATTTCCTTGTTCTGGCATTTTTGCGGAAGTCGAGATCCTGAAGTCCTCACCAGATTTG
                      ____________________________________________________________
consensus             CAATTTCCTTGTTCTGGCATTTTTGCGGAAGTCGAGATCCTGAAGTCCTCACCAGATTTG
 
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rJMSF023O17-          ATGATATCCAGTATGGATTGTGGTCTGATTCTCTCTAAATCCTTGATGAACTCACGAGCA
                      ____________________________________________________________
consensus             ATGATATCCAGTATGGATTGTGGTCTGATTCTCTCTAAATCCTTGATGAACTCACGAGCA
 
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rJMSF023O17-          AAGCCACGGTATGCATTTGGAGAGTAAATGCATTCAGTGGAGAAGTAATCCAACTTTTTA
                      ____________________________________________________________
consensus             AAGCCACGGTATGCATTTGGAGAGTAAATGCATTCAGTGGAGAAGTAATCCAACTTTTTA
 
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rJMSF023O17-          AAGTATGCATACATAACAATTTCCTTCTCGTATGTGTATTTGAAAGGCTTGCATCTAGGA
                      ____________________________________________________________
consensus             AAGTATGCATACATAACAATTTCCTTCTCGTATGTGTATTTGAAAGGCTTGCATCTAGGA
 
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rJMSF023O17-          ATAGGTCCATCTTCTCCAGTAACTATAGATGTACACCTACTCAACCTGGCAATATCACCA
JMSF023O17+                         TCCAGTAACTATAGATGTACACCTACTCAACCTGGCAATATCACCA
                      ____________________________________________________________
consensus             ATAGGTCCATCTTCTCCAGTAACTATAGATGTACACCTACTCAACCTGGCAATATCACCA
 
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rJMSF023O17-          CGTAATATGTTCA                                               
JMSF023O17+           CGTAATATGTTCAGAAGAACTGTTTCAGCTATATCATCTGCATTATGCCCAGTTACTAGC
                      ____________________________________________________________
consensus             CGTAATATGTTCAGAAGAACTGTTTCAGCTATATCATCTGCATTATGCCCAGTTACTAGC
 
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JMSF023O17+           TTGTCCACTTTTAGCAATGCAGCACCACGGTCAAGGGCCTGGCGACGGAAAACACCACAA
                      ____________________________________________________________
consensus             TTGTCCACTTTTAGCAATGCAGCACCACGGTCAAGGGCCTGGCGACGGAAAACACCACAA
 
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JMSF023O17+           AAAGTGCAGTTGTTCTTCAGACCTATCAACTTTACTATTTCATCCATTGTCCATCCATAC
                      ____________________________________________________________
consensus             AAAGTGCAGTTGTTCTTCAGACCTATCAACTTTACTATTTCATCCATTGTCCATCCATAC
 
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JMSF023O17+           AGCTCCTTATAGGAAACAACTTTCAATGGAAGTCCATACTGGATTTCATTTCTTTTAACA
                      ____________________________________________________________
consensus             AGCTCCTTATAGGAAACAACTTTCAATGGAAGTCCATACTGGATTTCATTTCTTTTAACA
 
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JMSF023O17+           GTTTCAAGAGAATCATCCCTGTAACCAGTGATACCTTCATCCACAGATAACAGGAAGAGA
                      ____________________________________________________________
consensus             GTTTCAAGAGAATCATCCCTGTAACCAGTGATACCTTCATCCACAGATAACAGGAAGAGA
 
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JMSF023O17+           TCCAGGCCATAATTGTGCCTGCGATTCAACTCTGACATCACATAAGCAAGCACCGTGGAG
                      ____________________________________________________________
consensus             TCCAGGCCATAATTGTGCCTGCGATTCAACTCTGACATCACATAAGCAAGCACCGTGGAG
 
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JMSF023O17+           TCTTTTCCGCCAGAAGCGCCAACAGCGATGCGTTCGCCGGGCCTGGAGAGCTGGTTGTCG
                      ____________________________________________________________
consensus             TCTTTTCCGCCAGAAGCGCCAACAGCGATGCGTTCGCCGGGCCTGGAGAGCTGGTTGTCG
 
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JMSF023O17+           ACGATAACCCTATGGATCTCCTCCTCGAAAACTTCATAGAAGCACTCCCTGCATATTTGT
                      ____________________________________________________________
consensus             ACGATAACCCTATGGATCTCCTCCTCGAAAACTTCATAGAAGCACTCCCTGCATATTTGT
 
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JMSF023O17+           TGAAGAGTTTTAGGGCGTTTCAGGGCGGCGCGTCTTTCATTGCAGATAGCGCACTGTCTA
                      ____________________________________________________________
consensus             TGAAGAGTTTTAGGGCGTTTCAGGGCGGCGCGTCTTTCATTGCAGATAGCGCACTGTCTA
 
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JMSF023O17+           CCCTTCGGTTTCGCCACGGCCGTCGCCGACTCCATGTAGATGGCCACCGCGCCGTCGCCC
                      ____________________________________________________________
consensus             CCCTTCGGTTTCGCCACGGCCGTCGCCGACTCCATGTAGATGGCCACCGCGCCGTCGCCC