Contig 007888:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023I14Sequence673007888 (2)ref|NP_001266265.1|2e-125L-lactate dehydrogenase A-like [Solanum lycopersicum] emb|CAA70100.1| L-lactate 739007888 (2)gb|KHG07563.1|1e-111L-lactate dehydrogenase B [Gossypium arboreum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023I14- ATTTGTTACATAAGATTTGCATTC
                      ____________________________________________________________
consensus ATTTGTTACATAAGATTTGCATTC
 
. : . : . : . : . : . :
rJMSF023I14- ACCAACTCTCTTCAACAAAGATACAAAATAGTGGAATACAGAGCATGGATAAGTTAGACA
                      ____________________________________________________________
consensus ACCAACTCTCTTCAACAAAGATACAAAATAGTGGAATACAGAGCATGGATAAGTTAGACA
 
. : . : . : . : . : . :
rJMSF023I14- AAAGTGAAAAGCCCCACAGATCCAACAACAATAAACTTAGAAGTATAAAACACAATAACC
                      ____________________________________________________________
consensus AAAGTGAAAAGCCCCACAGATCCAACAACAATAAACTTAGAAGTATAAAACACAATAACC
 
. : . : . : . : . : . :
rJMSF023I14- ACACTTATGTGTAATATATCATGGCATGGGCTCATCCTATGATCAAATTTCCAACTGGCT
                      ____________________________________________________________
consensus ACACTTATGTGTAATATATCATGGCATGGGCTCATCCTATGATCAAATTTCCAACTGGCT
 
. : . : . : . : . : . :
rJMSF023I14- TTGGACCTCCAATATGGTCTTAGCAGACTCCCTAAGCTTCTGCTCTTCCTCCTCAGTAAG
                      ____________________________________________________________
consensus TTGGACCTCCAATATGGTCTTAGCAGACTCCCTAAGCTTCTGCTCTTCCTCCTCAGTAAG
 
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rJMSF023I14- GTGCACGTTGGTAACGCCCAACACGCCCCATCTCCCGAGCTGCGATGGCAAGCTCAAGAA
                      ____________________________________________________________
consensus GTGCACGTTGGTAACGCCCAACACGCCCCATCTCCCGAGCTGCGATGGCAAGCTCAAGAA
 
. : . : . : . : . : . :
rJMSF023I14- AACTTCGCCCCCCTCGATGCCATAGAACCCCTTGGCGAGGACCGAGACAGGGTGAATCCT
                      ____________________________________________________________
consensus AACTTCGCCCCCCTCGATGCCATAGAACCCCTTGGCGAGGACCGAGACAGGGTGAATCCT
 
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rJMSF023I14- TCTCTGGTCACGAAGTATGGACCGAGCCAGGTTAGCCACAGAGTAGCCAATTGCCCAAGA
                      ____________________________________________________________
consensus TCTCTGGTCACGAAGTATGGACCGAGCCAGGTTAGCCACAGAGTAGCCAATTGCCCAAGA
 
. : . : . : . : . : . :
rJMSF023I14- GGTGTAGCCTTTCAGACTGATCACTTCATACGCACTCTGCACCACGTCTCGGTGGATGTT
                      ____________________________________________________________
consensus GGTGTAGCCTTTCAGACTGATCACTTCATACGCACTCTGCACCACGTCTCGGTGGATGTT
 
. : . : . : . : . : . :
rJMSF023I14- CTCCAGCGTTTCCTTCTCAAACGCAATCTGTTGCCTCTCAAGAAAGCTTAGAACCGGTAC
                      ____________________________________________________________
consensus CTCCAGCGTTTCCTTCTCAAACGCAATCTGTTGCCTCTCAAGAAAGCTTAGAACCGGTAC
 
. : . : . : . : . : . :
rJMSF023I14- CCCTCCTATGCTTATGCTTGACCACAGCGCCACTGAACTGTCACCGTGCTCCCCAACAAT
JMSF023I14+ GCTCCCCAACAAT
                      ____________________________________________________________
consensus CCCTCCTATGCTTATGCTTGACCACAGCGCCACTGAACTGTCACCGTGCTCCCCAACAAT
 
. : . : . : . : . : . :
rJMSF023I14- GTACGCTTGAACGTCCTGAGCATTGACATCAAGGTGATCAGCAATGAGGGATCGGAAGCG
JMSF023I14+ GTACGCTTGAACGTCCTGAGCATTGACATCAAGGTGATCAGCAATGAGGGATCGGAAGCG
                      ____________________________________________________________
consensus GTACGCTTGAACGTCCTGAGCATTGACATCAAGGTGATCAGCAATGAGGGATCGGAAGCG
 
. : . : . : . : . : . :
rJMSF023I14- GGAAGAGTCCAGGTTGGTGCCCGACCCGATGACCCGATTCGGTGGGAAGCCGGAG
JMSF023I14+ GGAAGAGTCCAGGTTGGTGCCCGACCCGATGACCCGATTCGGTGGGAAGCCGGAGAGCTT
                      ____________________________________________________________
consensus GGAAGAGTCCAGGTTGGTGCCCGACCCGATGACCCGATTCGGTGGGAAGCCGGAGAGCTT
 
. : . : . : . : . : . :
JMSF023I14+ CCAGGCGATGTAGGTCAGTACATCCACCGGATTGGAAACGATGAGCAGAATAGCATACTG
                      ____________________________________________________________
consensus CCAGGCGATGTAGGTCAGTACATCCACCGGATTGGAAACGATGAGCAGAATAGCATACTG
 
. : . : . : . : . : . :
JMSF023I14+ AGAGTATTTAGCCAGCGGCGGAATGATGCTTTTAAACAACGAACAATTCCTCTGGATGAG
                      ____________________________________________________________
consensus AGAGTATTTAGCCAGCGGCGGAATGATGCTTTTAAACAACGAACAATTCCTCTGGATGAG
 
. : . : . : . : . : . :
JMSF023I14+ ATTCAGGCGGGTCTCGCCCGGGTTCTGTCTGGCACCCGCCGTGACGATGACGAGATCCGA
                      ____________________________________________________________
consensus ATTCAGGCGGGTCTCGCCCGGGTTCTGTCTGGCACCCGCCGTGACGATGACGAGATCCGA
 
. : . : . : . : . : . :
JMSF023I14+ CCCGGCCGTTATGGAGTAATCGACGGAGGCGTGGATCTTAGTGCGCGGGAGAAAGGCGGC
                      ____________________________________________________________
consensus CCCGGCCGTTATGGAGTAATCGACGGAGGCGTGGATCTTAGTGCGCGGGAGAAAGGCGGC
 
. : . : . : . : . : . :
JMSF023I14+ GGCGTGCTGGAGATCGAGCATTTCTCCGCGGAGCTTATCGGCCTTGGCGTCGACTAGGGC
                      ____________________________________________________________
consensus GGCGTGCTGGAGATCGAGCATTTCTCCGCGGAGCTTATCGGCCTTGGCGTCGACTAGGGC
 
. : . : . : . : . : . :
JMSF023I14+ CAGCTCGTCGGCGAGATCCTGCGTGAGGATCGTCTGCGCTATAGCCATGCCGACGTTCCC
                      ____________________________________________________________
consensus CAGCTCGTCGGCGAGATCCTGCGTGAGGATCGTCTGCGCTATAGCCATGCCGACGTTCCC
 
. : . : . : . : . : . :
JMSF023I14+ GACGCCTATGACGGAGATTTTGGTGTGTCGCTTGGTGGGAGACGGCGGCGCCGCGTTCTG
                      ____________________________________________________________
consensus GACGCCTATGACGGAGATTTTGGTGTGTCGCTTGGTGGGAGACGGCGGCGCCGCGTTCTG
 
. : . : . : . : . : . :
JMSF023I14+ AACGGACTTGAAGAAGGCCTGGTTTAGGTCCAGCCCGCCCGGACCCAGTGAGGAAGACGA
                      ____________________________________________________________
consensus AACGGACTTGAAGAAGGCCTGGTTTAGGTCCAGCCCGCCCGGACCCAGTGAGGAAGACGA
 
. : . : . : . : . : . :
JMSF023I14+ TGAACTCTTATGCATTGTAGAATTCTATGATGCTCTGCAATGGCGTATAGTTTCTAGCTC
                      ____________________________________________________________
consensus TGAACTCTTATGCATTGTAGAATTCTATGATGCTCTGCAATGGCGTATAGTTTCTAGCTC