Contig 007886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011D03Sequence519007886 (4)dbj|BAE97716.1|1e-45JA-domain [Ipomoea batatas]713007886 (4)dbj|BAE97716.1|5e-48JA-domain [Ipomoea batatas]
JMSF023G14Sequence670007886 (4)dbj|BAE97716.1|3e-48JA-domain [Ipomoea batatas]737007886 (4)dbj|BAE97716.1|6e-48JA-domain [Ipomoea batatas]

Alignment

This contig is upended


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rJMFF011D03-                           TCTTATGAAAACGATAATTATTTACAGGAGAATTATATACACA
rJMSF023G14-                                                     GGAGAATTATATACACA
                      ____________________________________________________________
consensus                              TCTTATGAAAACGATAATTATTTACAGGAGAATTATATACACA
 
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rJMFF011D03-          AAACCTCAACCACATCTTCAAACCAAGATTGGTGGGTTCCCATCATTCTTCTGGTATGAA
rJMSF023G14-          AAACCTCAACCACATCTTCAAACCAAGATTGGTGGGTTCCCATCATTCTTCTGGTATGAA
JMSF023G14+                                                             CTGGTATGAA
                      ____________________________________________________________
consensus             AAACCTCAACCACATCTTCAAACCAAGATTGGTGGGTTCCCATCATTCTTCTGGTATGAA
 
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rJMFF011D03-          GAAGATGAAGATTTACAGAGATGATCAGAAGTATGGGTTAACGTGGGACCAATCCCGCAC
rJMSF023G14-          GAAGATGAAGATTTACAGAGATGATCAGAAGTATGGGTTAACGTGGGACCAATCCCGCAC
JMSF023G14+           GAAGATGAAGATTTACAGAGATGATCAGAAGTATGGGTTAACGTGGGACCAATCCCGCAC
                      ____________________________________________________________
consensus             GAAGATGAAGATTTACAGAGATGATCAGAAGTATGGGTTAACGTGGGACCAATCCCGCAC
 
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rJMFF011D03-          TCCGGCCGCCTCATATCCCATCCACTCTTCCCACTCTTCACCGTCGTCCTCGTAGTACTC
rJMSF023G14-          TCCGGCCGCCTCATATCCCATCCACTCTTCCCACTCTTCACCGTCGTCCTCGTAGTACTC
JMSF023G14+           TCCGGCCGCCTCATATCCCATCCACTCTTCCCACTCTTCACCGTCGTCCTCGTAGTACTC
                      ____________________________________________________________
consensus             TCCGGCCGCCTCATATCCCATCCACTCTTCCCACTCTTCACCGTCGTCCTCGTAGTACTC
 
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rJMFF011D03-          CTCCGCCGCCGGCGTCGCCGTTTCTCCTTTCAAATAGCTCATAATATTATCATAAGCTTC
JMFF011D03+                               TTTCTCCTTTCAAATAGCTCATAATATTATCATAAGCTTC
rJMSF023G14-          CTCCGCCGCCGGCGTCGCCGTTTCTCCTTTCAAATAGCTCATAATATTATCATAAGCTTC
JMSF023G14+           CTCCGCCGCCGGCGTCGCCGTTTCTCCTTTCAAATAGCTCATAATATTATCATAAGCTTC
                      ____________________________________________________________
consensus             CTCCGCCGCCGGCGTCGCCGTTTCTCCTTTCAAATAGCTCATAATATTATCATAAGCTTC
 
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rJMFF011D03-          ATAAATTTGGTGAAATTGAACGCCGCAATTACTTCCTCTGCAAACGTCTGGATGATACTT
JMFF011D03+           ATAAATTTGGTGAAATTGAACGCCGCAATTACTTCCTCTGCAAACGTCTGGATGATACTT
rJMSF023G14-          ATAAATTTGGTGAAATTGAACGCCGCAATTACTTCCTCTGCAAACGTCTGGATGATACTT
JMSF023G14+           ATAAATTTGGTGAAATTGAACGCCGCAATTACTTCCTCTGCAAACGTCTGGATGATACTT
                      ____________________________________________________________
consensus             ATAAATTTGGTGAAATTGAACGCCGCAATTACTTCCTCTGCAAACGTCTGGATGATACTT
 
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rJMFF011D03-          AAGAGCAAGTTGTCTGAAAGCTTTCTTGACCTCAGATTCAGAAGCCCCAGGGCGAAGCCT
JMFF011D03+           AAGAGCAAGTTGTCTGAAAGCTTTCTTGACCTCAGATTCAGAAGCCCCAGGGCGAAGCCT
rJMSF023G14-          AAGAGCAAGTTGTCTGAAAGCTTTCTTGACCTCAGATTCAGAAGCCCCAGGGCGAAGCCT
JMSF023G14+           AAGAGCAAGTTGTCTGAAAGCTTTCTTGACCTCAGATTCAGAAGCCCCAGGGCGAAGCCT
                      ____________________________________________________________
consensus             AAGAGCAAGTTGTCTGAAAGCTTTCTTGACCTCAGATTCAGAAGCCCCAGGGCGAAGCCT
 
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rJMFF011D03-          GAGAGTGGTATAAGGATCCGCCATGGAAGAAGGCGGGGAAGAAACGCAGAAAACTCTGGA
JMFF011D03+           GAGAGTGGTATAAGGATCCGCCATGGAAGAAGGCGGGGAAGAAACGCAGAAAACTCTGGA
rJMSF023G14-          GAGAGTGGTATAAGGATCCGCCATGGAAGAAGGCGGGGAAGAAACGCAGAAAACTCTGGA
JMSF023G14+           GAGAGTGGTATAAGGATCCGCCATGGAAGAAGGCGGGGAAGAAACGCAGAAAACTCTGGA
                      ____________________________________________________________
consensus             GAGAGTGGTATAAGGATCCGCCATGGAAGAAGGCGGGGAAGAAACGCAGAAAACTCTGGA
 
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rJMFF011D03-          CCCATTCTTCCGATTCCCTCCCATCTTCTTCCCCGGATTCCTCAACCGGAGCGAGGCCGA
JMFF011D03+           CCCATTCTTCCGATTCCCTCCCATCTTCTTCCCCGGATTCCTCAACCGGAGCGAGGCCGA
rJMSF023G14-          CCCATTCTTCCGATTCCCTCCCATCTTCTTCCCCGGATTCCTCAACCGGAGCGAGGCCGA
JMSF023G14+           CCCATTCTTCCGATTCCCTCCCATCTTCTTCCCCGGATTCCTCAACCGGAGCGAGGCCGA
                      ____________________________________________________________
consensus             CCCATTCTTCCGATTCCCTCCCATCTTCTTCCCCGGATTCCTCAACCGGAGCGAGGCCGA
 
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rJMFF011D03-          CCCGGAAACGCCACCCATCAATCCAAAAGCAGCCGCCATTTTTTCAGAGCTTCAAGGAGA
JMFF011D03+           CCCGGAAACGCCACCCATCAATCCAAAAGCAGCCGCCATTTTTTCAGAGCTTCAAGGAGA
rJMSF023G14-          CCCGGAAACGCCACCCATCAATCCAAAAGCAGCCGCCATTTTTTCAGAGCTTCAAGGAGA
JMSF023G14+           CCCGGAAACGCCACCCATCAATCCAAAAGCAGCCGCCATTTTTTCAGAGCTTCAAGGAGA
                      ____________________________________________________________
consensus             CCCGGAAACGCCACCCATCAATCCAAAAGCAGCCGCCATTTTTTCAGAGCTTCAAGGAGA
 
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rJMFF011D03-          GATTTGATTTCCTCAAGTATCTCGGCAATGAACGAATGCCCACAAGATTTTCTTGATATC
JMFF011D03+           GATTTGATTTCCTCAAGTATCTCGGCAATGAACGAATGCCCACAAGATTTTCTTGATATC
rJMSF023G14-          GATTTGATTTCCTCAAGTATCTCGGCAATGAACGAATGCCCACAAGATTTTCTTGATATC
JMSF023G14+           GATTTGATTTCCTCAAGTATCTCGGCAATGAACGAATGCCCACAAGATTTTCTTGATATC
                      ____________________________________________________________
consensus             GATTTGATTTCCTCAAGTATCTCGGCAATGAACGAATGCCCACAAGATTTTCTTGATATC
 
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rJMFF011D03-          TATAGCCTTCAAGGAACGCGAAATCGTGCTGGGTTTATAGAGATTGAAAAATGTAAATTT
JMFF011D03+           TATAGCCTTCAAGGAACGCGAAATCGTGCTGGGTTTATAGAGATTGAAAAATGTAAATTT
rJMSF023G14-          TATAGCCTTCAAGGAACGCGAAATCGTGCTGGGTTTATAGAGATTGAAAAATGTAAATTT
JMSF023G14+           TATAGCCTTCAAGGAACGCGAAATCGTGCTGGGTTTATAGAGATTGAAAAATGTAAATTT
                      ____________________________________________________________
consensus             TATAGCCTTCAAGGAACGCGAAATCGTGCTGGGTTTATAGAGATTGAAAAATGTAAATTT
 
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rJMFF011D03-          AAAAATTAAA                                                  
JMFF011D03+           AAAAATTAAAGTGTGGGTTCAAAAGAGAAGAGTAAAGGTATAAAGGAGAGGATATGAAT 
rJMSF023G14-          AAAAATTAAAGTGTGGGTTCAAAAGAGAAGAGTAAAGGTATAAAGGAGAGGATATGAAT 
JMSF023G14+           AAAAATTAAAGTGTGGGTTCAAAAGAGAAGAGTAAAGGTATAAAGGAGAGGATATGAATC
                      ____________________________________________________________
consensus             AAAAATTAAAGTGTGGGTTCAAAAGAGAAGAGTAAAGGTATAAAGGAGAGGATATGAATC