Contig 007884:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS088D08Sequence633007884 (3)ref|XP_006341192.1|203PREDICTED: uncharacterized protein LOC102602443 [Solanum tuberosum]
JMSF023D23Sequence626007884 (3)ref|XP_006341192.1|164PREDICTED: uncharacterized protein LOC102602443 [Solanum tuberosum]669009970 (3)ref|XP_009615566.1|50.1PREDICTED: uncharacterized protein LOC104108278 [Nicotiana tomentosiformis]
JMSF035K13Sequence651007884 (3)ref|XP_006341192.1|187PREDICTED: uncharacterized protein LOC102602443 [Solanum tuberosum]639009970 (3)ref|XP_011094444.1|146PREDICTED: uncharacterized protein LOC105174142 [Sesamum indicum]

Alignment

This contig is upended


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JMFS088D08+                                           TGATGCCTAACATAAGCATGGGTTGGAA
JMSF035K13+                                                                    GAA
                      ____________________________________________________________
consensus                                             TGATGCCTAACATAAGCATGGGTTGGAA
 
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JMFS088D08+           GATAAGGGCCAAATCATAGTCAATTATTGGCACATCTCTGCATGGATGCGGCACTCTAAG
JMSF035K13+           GATAAGGGCCAAATCATAGTCAATTATTGGCACATCTCTGCATGGATGCGGCACTCTAAG
JMSF023D23+                                             TCTCTGCATGGATGCGGCACTCTAAG
                      ____________________________________________________________
consensus             GATAAGGGCCAAATCATAGTCAATTATTGGCACATCTCTGCATGGATGCGGCACTCTAAG
 
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JMFS088D08+           GTTGTACCAAACAGATGATGCTGATGCCCCCATTATCATGCATTTGGAAATGGCAGCGGC
JMSF035K13+           GTTGTACCAAACAGATGATGCTGATGCCCCCATTATCATGCATTTGGAAATGGCAGCGGC
JMSF023D23+           GTTGTACCAAACAGATGATGCTGATGCCCCCATTATCATGCATTNGGAAATGGCAGCGGC
                      ____________________________________________________________
consensus             GTTGTACCAAACAGATGATGCTGATGCCCCCATTATCATGCATTTGGAAATGGCAGCGGC
 
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JMFS088D08+           GGACTTGGTATCAAATCCGACTATCAAAGTGAGCATAGGGACGAAGATGCCGCCGCCGCC
JMSF035K13+           GGACTTGGTATCAAATCCGACTATCAAAGTGAGCATAGGGACGAAGATGCCGCCGCCGCC
JMSF023D23+           GGACTTGGTATCAAATCCGACTATCAAAGTGAGCATAGGGACGAAGATGCCGCCGCCGCC
                      ____________________________________________________________
consensus             GGACTTGGTATCAAATCCGACTATCAAAGTGAGCATAGGGACGAAGATGCCGCCGCCGCC
 
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JMFS088D08+           CACTCCGCCCACGGTGCCGCACGCGGATCCCAGGAATCCTATCAATGTTGCCAGAGCACT
JMSF035K13+           CACTCCGCCCACGGTGCCGCACGCGGATCCCAGGAATCCTATCAATGTTGCCAGAGCACT
JMSF023D23+           CACTCCGCCCACGGTGCCGCACGCGGATCCCAGGAATCCTATCAATGTTGCCAGAGCACT
                      ____________________________________________________________
consensus             CACTCCGCCCACGGTGCCGCACGCGGATCCCAGGAATCCTATCAATGTTGCCAGAGCACT
 
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JMFS088D08+           CCGCCAACTAAACTTCAACTCCGGCCAAACGGTGGATTCAGATCGAAGAGGAGGAGGGAA
JMSF035K13+           CCGCCAACTAAACTTCAACTCCGGCCAAACGGTGGATTCAGATCGAAGAGGAGGAGGGAA
JMSF023D23+           CCGCCAACTAAACTTCAACTCCGGCCAAACGGTGGATTCAGATCGAAGAGGAGGAGGGAA
                      ____________________________________________________________
consensus             CCGCCAACTAAACTTCAACTCCGGCCAAACGGTGGATTCAGATCGAAGAGGAGGAGGGAA
 
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JMFS088D08+           TTGCGACAATGACGCAAGTTTAATGGTGGAGGAAATAGACTCTGGTGGTCCGTAACTGCC
JMSF035K13+           TTGCGACAATGACGCAAGTTTAATGGTGGAGGAAATAGACTCTGGTGGTCCGTAACTGCC
JMSF023D23+           TTGCGACAATGACGCAAGTTTAATGGTGGAGGAAATAGACTCTGGTGGTCCGTAACTGCC
                      ____________________________________________________________
consensus             TTGCGACAATGACGCAAGTTTAATGGTGGAGGAAATAGACTCTGGTGGTCCGTAACTGCC
 
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JMFS088D08+           ATTCGCGTGGTGGCTTTGGAGGTAGAAAACAGAAAGGACCGCCACGCAGGAGGCTGCTAG
JMSF035K13+           ATTCGCGTGGTGGCTTTGGAGGTAGAAAACAGAAAGGACCGCCACGCAGGAGGCTGCTAG
JMSF023D23+           ATTCGCGTGGTGGCTTTGGAGGTAGAAAACAGAAAGGACCGCCACGCAGGAGGCTGCTAG
                      ____________________________________________________________
consensus             ATTCGCGTGGTGGCTTTGGAGGTAGAAAACAGAAAGGACCGCCACGCAGGAGGCTGCTAG
 
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JMFS088D08+           AAGGTAAACCACGAATCCCATTGTCGCCGCCATGGCCAAACCACCGAACAAAAAATATTA
JMSF035K13+           AAGGTAAACCACGAATCCCATTGTCGCCGCCATGGCCAAACCACCGAACAAAAAATATTA
JMSF023D23+           AAGGTAAACCACGAATCCCATTGTCGCCGCCATGGCCAAACCACCGAACAAAAAATATTA
                      ____________________________________________________________
consensus             AAGGTAAACCACGAATCCCATTGTCGCCGCCATGGCCAAACCACCGAACAAAAAATATTA
 
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JMFS088D08+           CTACGACGTCTTCGCGCGCGTCAAGAATAACCACAGACCCCCAACGCAACCACCACCGTA
JMSF035K13+           CTACGACGTCTTCGCGCGCGTCAAGAATAACCACAGACCCCCAACGCAACCACCACCGTA
JMSF023D23+           CTACGACGTCTTCGCGCGCGTCAAGAATAACCACAGACCCCCAACGCAACCACCACCGTA
                      ____________________________________________________________
consensus             CTACGACGTCTTCGCGCGCGTCAAGAATAACCACAGACCCCCAACGCAACCACCACCGTA
 
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JMFS088D08+           GCTCTATCTCCCTCCCTAAGCCCTCTCCGCCGGATTTATTGCCCTCTTTTATATATTTTC
JMSF035K13+           GCTCTATCTCCCTCCCTAAGCCCTCTCCGCCGGATTTATTGCCCTCTTTTATATATTTTC
JMSF023D23+           GCTCTATCTCCCTCCCTAAGCCCTCTCCGCCGGATTTATTGCCCTCTTTTATATATTTTC
                      ____________________________________________________________
consensus             GCTCTATCTCCCTCCCTAAGCCCTCTCCGCCGGATTTATTGCCCTCTTTTATATATTTTC
 
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JMFS088D08+           TTGCG                                                       
JMSF035K13+           TTGCGTTACTTCTTCACCCGGCCCTTAGGATATATATGAATACACGCC            
JMSF023D23+           TTGCGTTACTTCTTCACCCGGCCCTTAGGATATATATGAATACACGCCGATAAATACGCC
                      ____________________________________________________________
consensus             TTGCGTTACTTCTTCACCCGGCCCTTAGGATATATATGAATACACGCCGATAAATACGCC