Contig 007883:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B18Sequence590007883 (2)ref|XP_004303008.1|134PREDICTED: uncharacterized protein LOC101299784 [Fragaria vesca subsp. vesca]778008196 (2)emb|CDP15389.1|4e-29unnamed protein product [Coffea canephora]
JMSF023C16Sequence704007883 (2)ref|XP_009778617.1|3e-61PREDICTED: uncharacterized protein LOC104227934 isoform X2 [Nicotiana sylvestri788008196 (2)ref|XP_009611163.1|1e-78PREDICTED: uncharacterized protein LOC104104723 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023C16+ TCATAATACAAATGTAAATTGTGTCCATAACGATGCCGCGGATC
                      ____________________________________________________________
consensus TCATAATACAAATGTAAATTGTGTCCATAACGATGCCGCGGATC
 
. : . : . : . : . : . :
JMSF023C16+ AATCGCTTCAATCCAATGCTGAAATGCCAATTTCTGAGCCTTGGCATCTTTAGACAGACC
                      ____________________________________________________________
consensus AATCGCTTCAATCCAATGCTGAAATGCCAATTTCTGAGCCTTGGCATCTTTAGACAGACC
 
. : . : . : . : . : . :
JMFF016B18+ CTTTGAAGCATTTACCNTAACTCGATTCCAACGAGAAGCTGTTGTTTCTGG
JMSF023C16+ CTTACCCACCTTTGAAGCATCTACCCTAACTCGATTCCAACGAGAAGCTGTTGTTTCTGG
                      ____________________________________________________________
consensus CTTACCCACCTTTGAAGCATTTACCCTAACTCGATTCCAACGAGAAGCTGTTGTTTCTGG
 
. : . : . : . : . : . :
JMFF016B18+ CTTCAAGAAATTGAAGAATGAAATTGTACTATGATTCAATCGAGCGTAATCTAGAGCTTG
JMSF023C16+ CTTCAAGAAATTGAAGAATGAAATTGTACTATGATTCAATCGAGCGTAATCTAGAGCTTG
                      ____________________________________________________________
consensus CTTCAAGAAATTGAAGAATGAAATTGTACTATGATTCAATCGAGCGTAATCTAGAGCTTG
 
. : . : . : . : . : . :
JMFF016B18+ CCACCAGAGCTCTTCAGCCACCACAGCAGAGTCTGCTAACATGCGCCGGGTACGGTAGCT
JMSF023C16+ CCACCAGAGCTCTTCAGCCACCACAGCAGAGTCTGCTAACATGCGCCGGGTACGGTAGCT
                      ____________________________________________________________
consensus CCACCAGAGCTCTTCAGCCACCACAGCAGAGTCTGCTAACATGCGCCGGGTACGGTAGCT
 
. : . : . : . : . : . :
JMFF016B18+ CCGATACACCTTCTGCAACGTCATGGCGGCGCTCGACTGACGTGTCAGTGGCGCGTCAAC
JMSF023C16+ CCGATACACCTTCTGCAACGTCATGGCGGCGCTCGACTGACGTGTCAGTGGCGCGTCAAC
                      ____________________________________________________________
consensus CCGATACACCTTCTGCAACGTCATGGCGGCGCTCGACTGACGTGTCAGTGGCGCGTCAAC
 
. : . : . : . : . : . :
JMFF016B18+ CACCGCCGCCGGCCCGGGAGAGACCAAGCCGGTGTGGACCACGCCATTGGGCGCGTAGGG
JMSF023C16+ CACCGCCGCCGGCCCGGGAGAGACCAAGCCGGTGTGGACCACGCCATTGGGCGCGTAGGG
                      ____________________________________________________________
consensus CACCGCCGCCGGCCCGGGAGAGACCAAGCCGGTGTGGACCACGCCATTGGGCGCGTAGGG
 
. : . : . : . : . : . :
JMFF016B18+ CACGGGTTCAGAACACAAAACGGTCAGGGGAGATATCTCGCGGTCATTAACCTTTTTGAC
JMSF023C16+ CACGGGTTCAGAACACAAAACGGTCAGGGGAGATATCTCGCGGTCATTAACCTTTTTGAC
                      ____________________________________________________________
consensus CACGGGTTCAGAACACAAAACGGTCAGGGGAGATATCTCGCGGTCATTAACCTTTTTGAC
 
. : . : . : . : . : . :
JMFF016B18+ GCTATTACATTCCGTGCCTCCGTCCTCGAAATTTTCGCTTCCGGAGGCATCGTTGGAGCT
JMSF023C16+ GCTATTACATTCCGTGCCTCCGTCCTCGAAATTTTCGCTTCCGGAGGCATCGTTGGAGCT
                      ____________________________________________________________
consensus GCTATTACATTCCGTGCCTCCGTCCTCGAAATTTTCGCTTCCGGAGGCATCGTTGGAGCT
 
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JMFF016B18+ CCGGAACCCCGACGCGCGGAGCTTCGGCTGATCGACGTAGGGAGAATAGTTAGCACGAGT
JMSF023C16+ CCGGAACCCCGACGCGCGGAGCTTCGGCTGATCGACGTAGGGAGAATAGTTAGCACGAGT
                      ____________________________________________________________
consensus CCGGAACCCCGACGCGCGGAGCTTCGGCTGATCGACGTAGGGAGAATAGTTAGCACGAGT
 
. : . : . : . : . : . :
JMFF016B18+ GCCGGAGTCGACACTTAAGGAGGTCGCCGGAGAGTGAGTTTCAACTTCCATTGAAGCCAA
JMSF023C16+ GCCGGAGTCGACACTTAAGGAGGTCGCCGGAGAGTGAGTTTCAACTTCCATTGAAGCCAA
                      ____________________________________________________________
consensus GCCGGAGTCGACACTTAAGGAGGTCGCCGGAGAGTGAGTTTCAACTTCCATTGAAGCCAA
 
. : . : . : . : . : . :
JMFF016B18+ ACTCAAGAGTATTGAGACCTTTCAGTAGAGAAAATTCTAGAGAGAAGTGAGAATAGAAT
JMSF023C16+ ACTCAAGAGTATTGAGACCTTTCAGTAGAGAAAATTCTAGAGAGAAGTGAGAATCGAATC
                      ____________________________________________________________
consensus ACTCAAGAGTATTGAGACCTTTCAGTAGAGAAAATTCTAGAGAGAAGTGAGAATCGAATC