| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017N08 | Sequence | 539 | 007879 (8) | ref|XP_009782255.1| | 300 | PREDICTED: uncharacterized protein LOC104231031 [Nicotiana sylvestris] | 796 | 007879 (8) | ref|XP_007222416.1| | 2e-133 | hypothetical protein PRUPE_ppa008192mg [Prunus persica] gb|EMJ23615.1| hypotheti |
| JMFF034O20 | Sequence | 543 | 007879 (8) | ref|XP_009782255.1| | 294 | PREDICTED: uncharacterized protein LOC104231031 [Nicotiana sylvestris] | |||||
| JMFN016K20 | Sequence | 598 | 007879 (8) | ref|XP_009782255.1| | 324 | PREDICTED: uncharacterized protein LOC104231031 [Nicotiana sylvestris] | |||||
| JMSF022H07 | Sequence | 210 | 007879 (8) | emb|CDP08209.1| | 1e-33 | unnamed protein product [Coffea canephora] | 204 | 007879 (8) | |||
| JMSF022I07 | Sequence | 691 | 007879 (8) | ref|XP_009782255.1| | 365 | PREDICTED: uncharacterized protein LOC104231031 [Nicotiana sylvestris] | 760 | 007879 (8) | ref|XP_007222416.1| | 2e-82 | hypothetical protein PRUPE_ppa008192mg [Prunus persica] gb|EMJ23615.1| hypotheti |
This contig is upended
. : . : . : . : . : . :
rJMSF022I07- AACAGAGAGTATATCCATACCCATACCCATACCCCCCTCCCTAGTAGTA
____________________________________________________________
consensus AACAGAGAGTATATCCATACCCATACCCATACCCCCCTCCCTAGTAGTA
. : . : . : . : . : . :
rJMSF022H07- TATACTCACTAACCAACCTCACAAG
rJMSF022I07- AAATTGGTCACAGGATTTGCACAACAGATACAGAATATACTCACTAACCAACCTCACAAG
____________________________________________________________
consensus AAATTGGTCACAGGATTTGCACAACAGATACAGAATATACTCACTAACCAACCTCACAAG
. : . : . : . : . : . :
rJMSF022H07- CTCAANNTGGCAATTCCCCCCTCTAAAANGNTAAATAACAGTACGTTANTTATATGTACG
rJMSF022I07- -TCAAAATGGCTATTCCCCCCTCTAAAAGGTTAAATAACAGTACGTTATTTATATGTACG
____________________________________________________________
consensus CTCAAAATGGCTATTCCCCCCTCTAAAAGGTTAAATAACAGTACGTTATTTATATGTACG
. : . : . : . : . : . :
rJMSF022H07- GAGGGATGATGGATAATAAATANGCTTCGNTCGACCCAANGATNTTTGTTTTTGT
rJMSF022I07- GAGGGATGATGGATAATAAATAGGCTTCGTTCGACCCAATGATTTTTGTTTTTGTTTGTT
rJMFF017N08- CTTCGTTCGACCCAATGATTTTTGTTTTTGTTTGTT
____________________________________________________________
consensus GAGGGATGATGGATAATAAATAGGCTTCGTTCGACCCAATGATTTTTGTTTTTGTTTGTT
. : . : . : . : . : . :
rJMSF022I07- TGGTTCAAACTTGAAAGCGGGGTATTGTATAATGTATGTGATACAGAGAGAATATGATAG
rJMFF017N08- TGGTTCAAACTTGAAAGCGGGGTATTGTATAATGTATGTGATACAGAGAGAATATGATAG
____________________________________________________________
consensus TGGTTCAAACTTGAAAGCGGGGTATTGTATAATGTATGTGATACAGAGAGAATATGATAG
. : . : . : . : . : . :
rJMSF022I07- GTGGTGTAGTAGTTCACAAATCCAGCATCCTTCCCCTTATCATGGCTTCTGCTTTCCGAA
rJMFF017N08- GTGGTGTAGTAGTTCACAAATCCAGCATCCTTCCCCTTATCATGGCTTCTGCTTTCCGAA
____________________________________________________________
consensus GTGGTGTAGTAGTTCACAAATCCAGCATCCTTCCCCTTATCATGGCTTCTGCTTTCCGAA
. : . : . : . : . : . :
rJMSF022I07- CTTGCTTTACTGGTCCCATGATGAAAACCTTGTCGGGGGGACCCTTGTCACCTCCAATGT
rJMFF017N08- CTTGCTTTACTGGTCCCATGATGAAAACCTTGTCGGGGGGACCCTTGTCACCTCCAATGT
____________________________________________________________
consensus CTTGCTTTACTGGTCCCATGATGAAAACCTTGTCGGGGGGACCCTTGTCACCTCCAATGT
. : . : . : . : . : . :
rJMSF022I07- GTATTTCAGCATTGCATGATTCCTTTATTGCGAGAATAGAAGATCCTCTTCTTCCAATGA
rJMFF017N08- GTATTTCAGCATTGCATGATTCCTTTATTGCGAGAATAGAAGATCCTCTTCTTCCAATGA
JMFN016K20+ TTATTGCGAGAATAGAAGATCCTC-TCTTCCAATGA
____________________________________________________________
consensus GTATTTCAGCATTGCATGATTCCTTTATTGCGAGAATAGAAGATCCTCTTCTTCCAATGA
. : . : . : . : . : . :
rJMSF022I07- CACGCCCCATTTTACCCCGGGGAACATCAAGAACAGACAAAGTCTCTTCCTCGGAAATGG
rJMFF017N08- CACGCCCCATTTTACCCCGGGGAACATCAAGAACAGACAAAGTCTCTTCCTCGGAAATGG
JMFN016K20+ CACGCCCCATTTTACCCCGGGGAACATCAAGAACAGACAAAGTCTCTTCCTCGGAAATGG
____________________________________________________________
consensus CACGCCCCATTTTACCCCGGGGAACATCAAGAACAGACAAAGTCTCTTCCTCGGAAATGG
. : . : . : . : . : . :
rJMSF022I07- ACCCATCAGCGACAAGATTTTCTGGGGGCAACGGAAGAGGAGGCCAATCTGCATAGTCAT
rJMFF017N08- ACCCATCAGCGACAAGATTTTCTGGGGGCAACGGAAGAGGAGGCCAATCTGCATAGTCAT
JMFN016K20+ ACCCATCAGCGACAAGATTTTCTGGGGGCAACGGAAGAGGAGGCCAATCTGCATAGTCAT
____________________________________________________________
consensus ACCCATCAGCGACAAGATTTTCTGGGGGCAACGGAAGAGGAGGCCAATCTGCATAGTCAT
. : . : . : . : . : . :
rJMSF022I07- TATCACTGATGCAGAAACATCGACAATATAGTGCACCGCGGACTGCAAGAAGCCATAAAG
rJMFF017N08- TATCACTGATGCAGAAACATCGACAATATAGTGCACCGCGGACTGCAAGAAGCCATAAAG
JMFN016K20+ TATCACTGATGCAGAAACATCGACAATATAGTGCACCGCGGACTGCAAGAAGCCATAAAG
____________________________________________________________
consensus TATCACTGATGCAGAAACATCGACAATATAGTGCACCGCGGACTGCAAGAAGCCATAAAG
. : . : . : . : . : . :
rJMSF022I07- ACCTTTCATTCAATTTCTCTACCATCTTATGATATATGGAAAGAAGAAACCGAACATCAT
rJMFF017N08- ACCTTTCATTCAATTTCTCTACCATCTTATGATATATGGAAAGAAGAAACCGAACATCAT
JMFN016K20+ ACCTTTCATTCAATTTCTCTACCATCTTATGATATATGGAAAGAAGAAACCGAACATCAT
JMSF022I07+ GAAAGAAGAAACCGAACATCAT
____________________________________________________________
consensus ACCTTTCATTCAATTTCTCTACCATCTTATGATATATGGAAAGAAGAAACCGAACATCAT
. : . : . : . : . : . :
rJMSF022I07- CTGCAGCAGCACGGACCATCAGGTCAGACAACGGTCTATACTTCCAAAATTT
rJMFF017N08- CTGCAGCAGCACGGACCATCAGGTCAGACAACGGTCTATACTTCCAAAATTTAGGATCCT
JMFN016K20+ CTGCAGCAGCACGGACCATCAGGTCAGACAACGGTCTATACTTCCAAAATTTAGGATCCT
JMSF022I07+ CTGCAGCAGCACGGACCATCAGGTCAGACAACGGTCTATACTTCCAAAATTTAGGATCCT
____________________________________________________________
consensus CTGCAGCAGCACGGACCATCAGGTCAGACAACGGTCTATACTTCCAAAATTTAGGATCCT
. : . : . : . : . : . :
rJMFF017N08- GCCTCATAAGAACTCGCACTTCTTCTTTCTCATCATAAGAAAATCCACAATAACATGGGT
JMFN016K20+ GCCTCATAAGAACTCGCACTTCTTCTTTCTCATCATAAGAAAATCCACAATAACATGGGT
JMFF017N08+ CTCATCATAAGAAAATCCACAATAACATGGGT
JMFF034O20+ CCACAATAACATGGGT
JMSF022H07+ TTCTTTCTCATCATAAGAAAATCCACAATAACATGGGT
JMSF022I07+ GCCTCATAAGAACTCGCACTTCTTCTTTCTCATCATAAGAAAATCCACAATAACATGGGT
____________________________________________________________
consensus GCCTCATAAGAACTCGCACTTCTTCTTTCTCATCATAAGAAAATCCACAATAACATGGGT
. : . : . : . : . : . :
rJMFF017N08- CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
JMFN016K20+ CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
JMFF017N08+ CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
JMFF034O20+ CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
JMSF022H07+ CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
JMSF022I07+ CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
____________________________________________________________
consensus CAGCAAGGAGACCAACAAATGATATGTAGTCATCTAGAACCCTTGGATGTCCTTCCTGCT
. : . : . : . : . : . :
rJMFF017N08- CCTTGATCAACCCATATGCAATCTGTGTATCTACAACATTTTGCAACTTGATACCAAATT
JMFN016K20+ CCTTGATCAACCCATATGCAATCTGTGTATCTACAACATTTTGCAACTTGATACCAAATT
JMFF017N08+ CCTTGATCAACCCATATGCAATCTGTGTATCTACAACATTTTGCAACTTGATACCAAATT
JMFF034O20+ CCTTGATCAACCCATATGCAATCTGTGTATCTACAACATTTTGCAACTTGATACCAAATT
JMSF022H07+ CCTTGATCAACCCATATGCAATCTGTGTATTTACAACATTTTGCAACTTGATACCAAATT
JMSF022I07+ CCTTGATCAACCCATATGCAATCTGTGTATCTACAACATTTTGCAACTTGATACCAAATT
____________________________________________________________
consensus CCTTGATCAACCCATATGCAATCTGTGTATCTACAACATTTTGCAACTTGATACCAAATT
. : . : . : . : . : . :
rJMFF017N08- GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAAT
JMFN016K20+ GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAATAACTTTAGTGACGTAACTAG
JMFF017N08+ GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAATAACTTTAGTGACGTAACTAG
JMFF034O20+ GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAATAACTTTAGTGACGTAACTAG
JMSF022H07+ GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAATAACTTTAGTGAC
JMSF022I07+ GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAATAACTTTAGTGACGTAACTAG
____________________________________________________________
consensus GGAAATACAATGCCTCACTATCTCGTTTACAATCATGAATAACTTTAGTGACGTAACTAG
. : . : . : . : . : . :
JMFN016K20+ ACTCCA
JMFF017N08+ ACTCCATTGCAGGCTTACAGGCTTTGATCAAAGCCTCTCCCCCCTCAATGGCATCAACCA
JMFF034O20+ ACTCCATTGCAGGCTTACAGGCTTTGATCAAAGCCTCTCCCCCCTCAATGGCATCAACCA
JMSF022I07+ ACTCCATTGCAGGCTTACAGGCTTTGATCAAAGCCTCTCCCCCCTCAATGGCATCAACCA
____________________________________________________________
consensus ACTCCATTGCAGGCTTACAGGCTTTGATCAAAGCCTCTCCCCCCTCAATGGCATCAACCA
. : . : . : . : . : . :
JMFF017N08+ AATATATTGCGTCTGGAAAGGCGATCTGCATAATACAAAGAGTCCCATGGCGGCAAAGAT
JMFF034O20+ AATATATTGCGTCTGGAAAGGCGATCTGCATAATACAAAGAGTCCCATGGCGGCAAAGAT
JMSF022I07+ AATATATTGCGTCTGGAAAGGCGATCTGCATAATACAAAGAGTCCCATGGCGGCAAAGAT
____________________________________________________________
consensus AATATATTGCGTCTGGAAAGGCGATCTGCATAATACAAAGAGTCCCATGGCGGCAAAGAT
. : . : . : . : . : . :
JMFF017N08+ CAACACCCTCACAATCAAAACCAACTACAAGCTGGTTCTCAGGAGAAGGCTCCAAGAATT
JMFF034O20+ CAACACCCTCACAATCAAAACCAACTACAAGCTGGTTCTCAGGAGAAGGCTCCAAGAATT
JMSF022I07+ CAACACCCTCACAATCAAAACCAACTACAAGCTGGTTCTCAGGAGAAGGCTCCAAGAATT
____________________________________________________________
consensus CAACACCCTCACAATCAAAACCAACTACAAGCTGGTTCTCAGGAGAAGGCTCCAAGAATT
. : . : . : . : . : . :
JMFF017N08+ CAACAGGTAGTTGGCCTGGTTGAGTCACGATATGTACAGGAACTGAAGGAAACAGACTTT
JMFF034O20+ CAACAGGTAGTTGGCCTGGTTGAGTCACGATATGTACAGGAACTGAAGGAAACAGACTTT
JMSF022I07+ CAACAGGTAGTTGGCCTGGTTGAGTCACGATATGTACAGGAACTGAAGGAAACAGACTTT
____________________________________________________________
consensus CAACAGGTAGTTGGCCTGGTTGAGTCACGATATGTACAGGAACTGAAGGAAACAGACTTT
. : . : . : . : . : . :
JMFF017N08+ CATCCTCTCGAACCTCACCACCTGGGTCAGGAGCAAGAGGAATGTGGGTTTGGGTAGAAG
JMFF034O20+ CATCCTCTCGAACCTCACCACCTGGGTCAGGAGCAAGAGGAATGTGGGTTTGGGTAGAAG
JMSF022I07+ CATCCTCTCGAACCTCACCACCTGGGTCAGGAGCAAGAGGAATGTGGGTTTGGGTAGAAG
____________________________________________________________
consensus CATCCTCTCGAACCTCACCACCTGGGTCAGGAGCAAGAGGAATGTGGGTTTGGGTAGAAG
. : . : . : . : . : . :
JMFF017N08+ ACGCCATGCGAGCGATCGGAGAA
JMFF034O20+ ACGCCATGCGAGCGATCGGAGAA
JMSF022I07+ ACGCCATGCGAGCGATCGGAGAATCCCAGGCAGATCGGAATTTCCCTCTTTTTATTTCTC
____________________________________________________________
consensus ACGCCATGCGAGCGATCGGAGAATCCCAGGCAGATCGGAATTTCCCTCTTTTTATTTCTC