Contig 007871:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021A01+                    GGAGGGAGTGGCGGATGAGATGAGACATGGCTGTTTCGTGTCTATCTCTG
JMSF021A01-                     GGAGGGAGTGGCGGATGAGATGAGACATGGCTGTTTCGTGTCTATCTCTG
                      ____________________________________________________________
consensus                       GGAGGGAGTGGCGGATGAGATGAGACATGGCTGTTTCGTGTCTATCTCTG
 
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rJMSF021A01+          TTTCTCTCTCCACCGTCGTCGCCGCCGCCGCCGCCACTTAAAGAGCTTCAACCGTTCACC
JMSF021A01-           TTTCTCTCTCCACCGTCGTCGCCGCCGCCGCCGCCACTTAAAGAGCTTCAACCGTTCACC
                      ____________________________________________________________
consensus             TTTCTCTCTCCACCGTCGTCGCCGCCGCCGCCGCCACTTAAAGAGCTTCAACCGTTCACC
 
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rJMSF021A01+          GCCCACAGCTCTCGTCTCTCACTTCTCTTCCCGGTAACTTCACCATCCCAACTTTCCTCC
JMSF021A01-           GCCCACAGCTCTCGTCTCTCACTTCTCTTCCCGGTAACTTCACCATCCCAACTTTCCTCC
                      ____________________________________________________________
consensus             GCCCACAGCTCTCGTCTCTCACTTCTCTTCCCGGTAACTTCACCATCCCAACTTTCCTCC
 
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rJMSF021A01+          AAGAGGAGGATTTCCCATTCTCGCCGGAATGGAGGGAGAATCTCTGCTTTCCCGGAGAAT
JMSF021A01-           AAGAGGAGGATTTCCCATTCTCGCCGGAATGGAGGGAGAATCTCTGCTTTCCCGGAGAAT
                      ____________________________________________________________
consensus             AAGAGGAGGATTTCCCATTCTCGCCGGAATGGAGGGAGAATCTCTGCTTTCCCGGAGAAT
 
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rJMSF021A01+          TTCCTGCTCTCAGAAGCAGACGCGGTCCTGAATTCCCCGGAAATAGCTTCGACGGCCGAT
JMSF021A01-           TTCCTGCTCTCAGAAGCAGACGCGGTCCTGAATTCCCCGGAAATAGCTTCGACGGCCGAT
                      ____________________________________________________________
consensus             TTCCTGCTCTCAGAAGCAGACGCGGTCCTGAATTCCCCGGAAATAGCTTCGACGGCCGAT
 
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rJMSF021A01+          GGTGGAACGTCGTCCGTCATATCAACCCTGCTTTTGATTGCTTTCGCCGGCTTATCCGTT
JMSF021A01-           GGTGGAACGTCGTCCGTCATATCAACCCTGCTTTTGATTGCTTTCGCCGGCTTATCCGTT
                      ____________________________________________________________
consensus             GGTGGAACGTCGTCCGTCATATCAACCCTGCTTTTGATTGCTTTCGCCGGCTTATCCGTT
 
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rJMSF021A01+          CTCACTGTCGGGGTTATCTACATATCTGTAACAGATTACTTGCAGAAAAGGGAGAGTGAC
JMSF021A01-           CTCACTGTCGGGGTTATCTACATATCTGTAACAGATTACTTGCAGAAAAGGGAGAGTGAC
                      ____________________________________________________________
consensus             CTCACTGTCGGGGTTATCTACATATCTGTAACAGATTACTTGCAGAAAAGGGAGAGTGAC
 
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rJMSF021A01+          AAGTTTGAAAAAGAAGAGGCAGCTAAGAAGAAGAAGAAGAGTGGGAAAAAGGGGAAAGTT
JMSF021A01-           AAGTTTGAAAAAGAAGAGGCAGCTAAGAAGAAGAAGAAGAGTGGGAAAAAGGGGAAAGTT
                      ____________________________________________________________
consensus             AAGTTTGAAAAAGAAGAGGCAGCTAAGAAGAAGAAGAAGAGTGGGAAAAAGGGGAAAGTT
 
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rJMSF021A01+          GTAAGTAGAGCTAGAGCTGGACCAAGAGGCTTTGGGCAAAAGATTGTTGAAGAAGATGAT
JMSF021A01-           GTAAGTAGAGCTAGAGCTGGACCAAGAGGCTTTGGGCAAAAGATTGTTGAAGAAGATGAT
                      ____________________________________________________________
consensus             GTAAGTAGAGCTAGAGCTGGACCAAGAGGCTTTGGGCAAAAGATTGTTGAAGAAGATGAT
 
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rJMSF021A01+          GATTGATGTTATCAAATTGCAGCCTTTTTACATATGTTTATTCTTCTCTTTGGGCACTCT
JMSF021A01-           GATTGATGTTATCAAATTGCAGCCTTTTTACATATGTTTATTCTTCTCTTTGGGCACTCT
                      ____________________________________________________________
consensus             GATTGATGTTATCAAATTGCAGCCTTTTTACATATGTTTATTCTTCTCTTTGGGCACTCT
 
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rJMSF021A01+          TTTCCAATGTTC                                                
JMSF021A01-           TTTCCAATGTTCATTCCAATTCAATTCGGTTAATAAAAATACCAGATGTTATATTTNNNA
                      ____________________________________________________________
consensus             TTTCCAATGTTCATTCCAATTCAATTCGGTTAATAAAAATACCAGATGTTATATTTNNNA