Contig 007870:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009M15Sequence602007870 (10)tpg|DAA54328.1|2e-97TPA: hypothetical protein ZEAMMB73_804748 [Zea mays]727011080 (13)ref|XP_004229010.1|1e-103PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMFF029A24Sequence545007870 (10)tpg|DAA54328.1|1e-76TPA: hypothetical protein ZEAMMB73_804748 [Zea mays]686011080 (13)ref|XP_004229010.1|7e-106PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMFF033J10Sequence539007870 (10)tpg|DAA54328.1|2e-81TPA: hypothetical protein ZEAMMB73_804748 [Zea mays]731011080 (13)ref|XP_004229010.1|3e-104PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMSF018E15Sequence506007870 (10)tpg|DAA54328.1|9e-75TPA: hypothetical protein ZEAMMB73_804748 [Zea mays]753011080 (13)ref|XP_004229010.1|2e-126PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMSF019F07Sequence316007870 (10)tpg|DAA54328.1|8e-40TPA: hypothetical protein ZEAMMB73_804748 [Zea mays]
JMSF020P14Sequence652007870 (10)ref|XP_011071378.1|3e-109PREDICTED: ATP-citrate synthase beta chain protein 2 [Sesamum indicum] ref|XP_0717011080 (13)ref|XP_004229010.1|1e-128PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMSF028C22Sequence660007870 (10)ref|XP_011071378.1|3e-113PREDICTED: ATP-citrate synthase beta chain protein 2 [Sesamum indicum] ref|XP_0720011080 (13)ref|XP_004229010.1|3e-123PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMSF041L20Sequence782007870 (10)ref|XP_011071378.1|5e-145PREDICTED: ATP-citrate synthase beta chain protein 2 [Sesamum indicum] ref|XP_0747011080 (13)ref|XP_004229010.1|1e-112PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMSF043M05Sequence821007870 (10)ref|XP_011071378.1|1e-127PREDICTED: ATP-citrate synthase beta chain protein 2 [Sesamum indicum] ref|XP_0723011080 (13)ref|XP_004229010.1|3e-120PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum
JMSF047C22Sequence692007870 (10)ref|XP_011071378.1|2e-119PREDICTED: ATP-citrate synthase beta chain protein 2 [Sesamum indicum] ref|XP_0732011080 (13)ref|XP_004229010.1|4e-123PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum

Alignment

This contig is upended


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JMSF041L20+                                                             AAGAATAACC
JMSF043M05+                             AAGGAGTATTCATCCNTTCCACCGAGTTCCCCAAGAACAACC
                      ____________________________________________________________
consensus                               AAGGAGTATTCATCCNTTCCACCGAGTTCCCCAAGAATAACC
 
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JMSF041L20+           ATCATTTTAACCTGTGGAATATTGTTAAATCGCAGAACATGATCAGACAATGTTGAACCA
JMSF043M05+           ATCATTTTAACCTGTGGAATATTGTTAAATCGCAGAACATGATCAGACAATGTTGAACCA
                      ____________________________________________________________
consensus             ATCATTTTAACCTGTGGAATATTGTTAAATCGCAGAACATGATCAGACAATGTTGAACCA
 
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JMSF028C22+                                                               GGGCAATG
JMSF041L20+           GGAAACACATCTCCTCCAATTGCAATACCTTCATAAATTCCATCTGTCACTCGGGCAATG
JMSF047C22+                                       CTTCATAAATTCCATCTGTCACTCGGGCAATG
JMSF043M05+           GGAAACACATCTCCTCCAATTGCAATACCTTCATAAATTCCATCTGTCACTCGGGCAATG
                      ____________________________________________________________
consensus             GGAAACACATCTCCTCCAATTGCAATACCTTCATAAATTCCATCTGTCACTCGGGCAATG
 
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JMSF028C22+           GTATTGTACAATTCATTAGACATACCACCTGATTTGGAGACAAATCCAACAGATCCAGGT
JMSF041L20+           GTATTGTACAATTCATTAGACATACCACCTGATTTGGAGACAAATCCAACAGATCCAGGT
JMSF047C22+           GTATTGTACAATTCATTAGACATACCACCTGATTTGGAGACAAATCCAACAGATCCAGGT
JMSF043M05+           GTATTGTACAATTCATTAGACATACCACCTGATTTGGAGACAAATCCAACAGATCCAGGT
JMFF009M15+                                                                    GGT
JMSF020P14+                   CAATTCATTAGACATACCACCTGATTTGGAGACAAATCCAACAGATCCAGGT
                      ____________________________________________________________
consensus             GTATTGTACAATTCATTAGACATACCACCTGATTTGGAGACAAATCCAACAGATCCAGGT
 
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JMSF028C22+           CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
JMSF041L20+           CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
JMSF047C22+           CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
JMSF043M05+           CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
JMFF009M15+           CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
JMSF020P14+           CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
                      ____________________________________________________________
consensus             CTGTATAGCTTGCATTGAATAATGTTATCAATTGTTCCAGCAGTGTCACCAATTCTAAAA
 
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JMSF028C22+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMSF018E15+                                     AGCTGGACCAACAACANCCTTGTTGTTTGCCTTT
JMSF041L20+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMFF029A24+                               AACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMSF047C22+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMSF043M05+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMFF009M15+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMFF033J10+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
JMSF020P14+           GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
                      ____________________________________________________________
consensus             GCACCAGCTTGAATTCCTCCAACGGTAGCTGGACCAACAACAACCTTGTTGTTTGCCTTT
 
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JMSF028C22+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMSF018E15+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMSF041L20+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMFF029A24+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMSF047C22+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMSF043M05+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMFF009M15+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMFF033J10+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
JMSF020P14+           GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
                      ____________________________________________________________
consensus             GCATAAGCAATCAATTGCTTGGTGTCCGACTCTGGAACACCTTCAGCTATAATAGCCACA
 
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JMSF028C22+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMSF018E15+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMSF041L20+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMFF029A24+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMSF047C22+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMSF043M05+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMFF009M15+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMFF033J10+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
JMSF020P14+           ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
                      ____________________________________________________________
consensus             ACTCTAATGGTTGGTTGTTTGAGAGCAGCCATGGAGGAAGCAGCGGCACTTCTAAATGAT
 
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JMSF028C22+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMSF018E15+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMSF041L20+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMFF029A24+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMSF019F07+                                                       GGCGTCAATGGCTGAA
JMSF047C22+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMSF043M05+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMFF009M15+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMFF033J10+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
JMSF020P14+           GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
                      ____________________________________________________________
consensus             GCAAAGTTAATGAAAACATCAGCTGTGGGGTGAGCAGCACAAGCGGCGTCAATGGCTGAA
 
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JMSF028C22+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMSF018E15+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMSF041L20+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMFF029A24+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMSF019F07+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMSF047C22+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMSF043M05+           CGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMFF009M15+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMFF033J10+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
JMSF020P14+           TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
                      ____________________________________________________________
consensus             TGCACTGGGATTGCGATCTCCTCCTGACCGAAGAAGAGCTTTTGGAATCCCTCTGAACCA
 
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JMSF028C22+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMSF018E15+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMSF041L20+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMFF029A24+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMSF019F07+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMSF047C22+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMSF043M05+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAAT-AAGC
JMFF009M15+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMFF033J10+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
JMSF020P14+           GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
                      ____________________________________________________________
consensus             GGGTTTACAATTCCAGCAACAGAAGGTGTTTCTCTCCCACAAAGGAAATCGAAATCAAGC
 
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JMSF028C22+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMSF018E15+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMSF041L20+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMFF029A24+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMSF019F07+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMSF047C22+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMSF043M05+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMFF009M15+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMFF033J10+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
JMSF020P14+           ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
                      ____________________________________________________________
consensus             ATCCGTTGGATGGGAAGTTGCTTGTAGTTGTAGAACAAAGCTTGAGTGGTCTTGGAAAAA
 
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JMSF028C22+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMSF018E15+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMSF041L20+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMFF029A24+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTT               
JMSF019F07+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMSF047C22+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMSF043M05+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMFF009M15+           AGTTGCCCAGTAGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMFF033J10+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
JMSF020P14+           AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
                      ____________________________________________________________
consensus             AGTTGCCCAGTTGCCATGGTGTCCAATCAATTCACAACTGAGCTTGGTAGGTTGTGCGAG
 
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JMSF028C22+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTC        
JMSF018E15+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTC        
JMSF041L20+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTC        
JMSF019F07+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGAC   
JMSF047C22+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGACA  
JMSF043M05+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGACAC 
JMFF009M15+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGACAC 
JMFF033J10+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGACAC 
JMSF020P14+           ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGACACC
                      ____________________________________________________________
consensus             ATCAAAGGAGTCGCCTCGTAAGCTCAGACGAGGTGTGTGAGAGAGACCGGTGGAGACACC