Contig 007869:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF020K04+                                                    AAAAAAAAAAAGTGTTATT
JMSF020L09+                                                        AAAAAAAGTGTTATT
                      ____________________________________________________________
consensus                                                      AAAAAAAAAAAGTGTTATT
 
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JMSF020K04+           TTTATGCAACCAAGAAAAACCAACACCTAAGAGCTTATATATAAGCTACAACTACCACCA
JMSF020L09+           TTTATGCAACCAAGAAAAACCAACACCTAAGAGCTTATATATAAGCTACAACTACCACCA
                      ____________________________________________________________
consensus             TTTATGCAACCAAGAAAAACCAACACCTAAGAGCTTATATATAAGCTACAACTACCACCA
 
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JMSF020K04+           CTTTGCCAGTTTTCCTATTCCCACAAACTAATTACACACAGCAGACATGAGGAAAATACT
JMSF020L09+           CTTTGCCAGTTTTCCTATTCCCACAAACTAATTACACACAGCAGACATGAGGAAAATACT
                      ____________________________________________________________
consensus             CTTTGCCAGTTTTCCTATTCCCACAAACTAATTACACACAGCAGACATGAGGAAAATACT
 
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JMSF020K04+           GGCTTCTACAATTATAGGGAGCAAAAGGAAGAAGCCACTTCAGAGCCAAGGTACCATACC
JMSF020L09+           GGCTTCTACAATTATAGGGAGCAAAAGGAAGAAGCCACTTCAGAGCCAAGGTACCATACC
                      ____________________________________________________________
consensus             GGCTTCTACAATTATAGGGAGCAAAAGGAAGAAGCCACTTCAGAGCCAAGGTACCATACC
 
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JMSF020K04+           CAAATTAAATACTGTAATTGAAGGTTTACCTGTACAGTATGTATACCTGTTTTAAAGCTT
JMSF020L09+           CAAATTAAATACTGTAATTGAAGGTTTACCTGTACAGTATGTATACCTGTTTTAAAGCTT
                      ____________________________________________________________
consensus             CAAATTAAATACTGTAATTGAAGGTTTACCTGTACAGTATGTATACCTGTTTTAAAGCTT
 
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JMSF020K04+           TCATGCATGCTTCACTTGCAAACTTGATTACATTTGTATACATATGAATAATAGATCCCT
JMSF020L09+           TCATGCATGCTTCACTTGCAAACTTGATTACATTTGTATACATATGAATAATAGATCCCT
                      ____________________________________________________________
consensus             TCATGCATGCTTCACTTGCAAACTTGATTACATTTGTATACATATGAATAATAGATCCCT
 
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JMSF020K04+           TATACTTTATAGTTGATGAGAACGGTGAAGAATCCACATCTCTTAGTAGCAGTTTAGACG
JMSF020L09+           TATACTTTATAGTTGATGAGAACGGTGAAGAATCCACATCTCTTAGTAGCAGTTTAGACG
                      ____________________________________________________________
consensus             TATACTTTATAGTTGATGAGAACGGTGAAGAATCCACATCTCTTAGTAGCAGTTTAGACG
 
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JMSF020K04+           AAGATCTATGGGTAAAACACCAGATCTGTAACTAAAAACGAAGATCGAAGGTCTAAAACT
JMSF003I23+                              CCAGATCTGTAACTAAAAACGAAGATCGAAGGTCTAAAACT
JMSF020L09+           AAGATCTATGGGTAAAACACCAGATCTGTAACTAAAAACGAAGATCGAAGGTCTAAAACT
                      ____________________________________________________________
consensus             AAGATCTATGGGTAAAACACCAGATCTGTAACTAAAAACGAAGATCGAAGGTCTAAAACT
 
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JMSF020K04+           ATGCCCATCTGCCGATTGCAACTAGGTTTTTGTAATCAGCAAAATCTTATGATCATCGCT
JMSF003I23+           ATGCCCATCTGCCGATTGCAACTAGGTTTTTGTAATCAGCAAAATCTTATGATCATCGCT
JMSF020L09+           ATGCCCATCTGCCGATTGCAACTAGGTTTTTGTAATCAGCAAAATCTTATGATCATCGCT
                      ____________________________________________________________
consensus             ATGCCCATCTGCCGATTGCAACTAGGTTTTTGTAATCAGCAAAATCTTATGATCATCGCT
 
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JMSF020K04+           GGGTAATAAATAACAACAAATATATGTAGAAATCAATTTCGTGGATTTAAGTATTTAGGA
JMSF003I23+           GGGTAATAAATAACAACAAATATATGTAGAAATCAATTTCGTGGATTTAAGTATTTAGGA
JMSF020L09+           GGGTAATAAATAACAACAAATATATGTAGAAATCAATTTCGTGGATTTAAGTATTTAGGA
                      ____________________________________________________________
consensus             GGGTAATAAATAACAACAAATATATGTAGAAATCAATTTCGTGGATTTAAGTATTTAGGA
 
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JMSF020K04+           TGAAGGTTGTAGACAAGGAAATCGGATTGGAAAGCATAGATTATACGAGCTAAGACGAGA
JMSF003I23+           TGAAGGTTGTAGACAAGGAAATCGGATTGGAAAGCATAGATTATACGAGCTAAGACGAGA
JMSF020L09+           TGAAGGTTGTAGACAAGGAAATCGGATTGGAAAGCATAGATTATACGAGCTAAGACGAGA
                      ____________________________________________________________
consensus             TGAAGGTTGTAGACAAGGAAATCGGATTGGAAAGCATAGATTATACGAGCTAAGACGAGA
 
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JMSF020K04+           AGAGAGAATAAACAGACACAGAGAGATCCATAGAGAGACAATCGGAAATGGC        
JMSF003I23+           AGAGAGAATACACAGACACAGAGAGATCCATAGAGAGACAATCGGAAATGGC        
JMSF020L09+           AGAGAGAATAAACAGACACAGAGAGATCCATAGAGAGACAATCGGAAATGGCGGTCAACC
                      ____________________________________________________________
consensus             AGAGAGAATAAACAGACACAGAGAGATCCATAGAGAGACAATCGGAAATGGCGGTCAACC