Contig 007867:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048G11Sequence293007867 (3)ref|XP_007202580.1|2e-25hypothetical protein PRUPE_ppa011564mg [Prunus persica] gb|EMJ03779.1| hypotheti357022398ref|XP_004249472.1|1e-04PREDICTED: tankyrase [Solanum lycopersicum]
JMSF020J14Sequence681007867 (3)ref|XP_010243201.1|1e-88PREDICTED: BRCA1-associated RING domain protein 1 [Nelumbo nucifera]783007867 (3)ref|XP_010243201.1|9e-84PREDICTED: BRCA1-associated RING domain protein 1 [Nelumbo nucifera]

Alignment

This contig is upended


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rJMSF020J14-              GCTGCTTTGTGCTATCCAGAATTTCCCACTAAAATGTTTCTATAAAACAAGGTGAC
                      ____________________________________________________________
consensus                 GCTGCTTTGTGCTATCCAGAATTTCCCACTAAAATGTTTCTATAAAACAAGGTGAC
 
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rJMSF020J14-          ATATGTGATGTAAATAAAGGACTCTCTACTTTCAGAATGAAGAACTACTCGCCGCAGAGT
                      ____________________________________________________________
consensus             ATATGTGATGTAAATAAAGGACTCTCTACTTTCAGAATGAAGAACTACTCGCCGCAGAGT
 
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rJMSF020J14-          ACACACACTACTTTTGTGACAATTGCAAATCACTACATAAAACATTCCATACCCCTATGA
                      ____________________________________________________________
consensus             ACACACACTACTTTTGTGACAATTGCAAATCACTACATAAAACATTCCATACCCCTATGA
 
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rJMSF020J14-          CACAAATGGACTAAAAGTCAATCGCAACAAGATCAAAAGCCCAGTTCATGATTGAAAACT
JMSF020J14+                                                               TGAAAACT
                      ____________________________________________________________
consensus             CACAAATGGACTAAAAGTCAATCGCAACAAGATCAAAAGCCCAGTTCATGATTGAAAACT
 
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rJMSF020J14-          TAGCTATTCATTGCCATTGTAGCCTCTTCCAGGACTCTCTTTGCTTCAGTACCAGGGTCA
JMSF020J14+           TAGCTATTCATTGCCATTGTAGCNTCTTCCAGGACTCTCTTTGCTTCAGTACCAGGGTCA
                      ____________________________________________________________
consensus             TAGCTATTCATTGCCATTGTAGCCTCTTCCAGGACTCTCTTTGCTTCAGTACCAGGGTCA
 
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rJMSF020J14-          GCAAGCTCACTAGGGATCTTCCCATATATATTCGTCTTGGTAGGAGAAGCCCCCGCATCT
JMSF020J14+           GCAAGCTCACTAGGGATCTTCCCATATATATTCGTCTTGGTAGGAGAAGCCCCCGCATCT
                      ____________________________________________________________
consensus             GCAAGCTCACTAGGGATCTTCCCATATATATTCGTCTTGGTAGGAGAAGCCCCCGCATCT
 
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rJMSF020J14-          AACAACAACCTAACAACATCTGCATGCTCGCCTCTAGCAGCATGATGTAGAGGCGTATCA
JMSF020J14+           AACAACAACCTAACAACATCTGCATGCTCGCCTCTAGCAGCATGATGTAGAGGCGTATCA
                      ____________________________________________________________
consensus             AACAACAACCTAACAACATCTGCATGCTCGCCTCTAGCAGCATGATGTAGAGGCGTATCA
 
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rJMSF020J14-          CCTTCTATATCGACTGTCTCCAGCATGTTCTTCACACATTCAGGATCACTAGTGCTACTG
JMSF020J14+           CCTTCTATATCGACTGTCTCCAGCATGTTCTTCACACATTCAGGATCACTAGTGCTACTG
                      ____________________________________________________________
consensus             CCTTCTATATCGACTGTCTCCAGCATGTTCTTCACACATTCAGGATCACTAGTGCTACTG
 
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rJMSF020J14-          ATAAGAAGCTGAACTATCTGAGTAAATCCTCCTGCACACGCATCATGCAAGGGAATTGCA
JMSF020J14+           ATAAGAAGCTGAACTATCTGAGTAAATCCTCCTGCACACGCATCATGCAAGGGAATTGCA
                      ____________________________________________________________
consensus             ATAAGAAGCTGAACTATCTGAGTAAATCCTCCTGCACACGCATCATGCAAGGGAATTGCA
 
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rJMSF020J14-          CCCTCTTCATCCTTGGCCTCCAAAGAGGCTCCCTTTTCTAACAACAGCTGAACACAAGAC
JMFF048G11+                                                                     AC
JMSF020J14+           CCCTCTTCATCCTTGGCCTCCAAAGAGGCTCCCTTTTCTAACAACAGCTGAACACAAGAC
                      ____________________________________________________________
consensus             CCCTCTTCATCCTTGGCCTCCAAAGAGGCTCCCTTTTCTAACAACAGCTGAACACAAGAC
 
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rJMSF020J14-          AGGTGGCCGTACAAACAGCTAAGATGAAGAGCAGTGTCTCCATCTTCAACTGGTTCATCG
JMFF048G11+           AGGTGGCCGTACAAACAGCTAAGATGAAGAGCAGTGTCTCCATCTTCAACTGGTTCATCG
JMSF020J14+           AGGTGGCCGTACAAACAGCTAAGATGAAGAGCAGTGTCTCCATCTTCAACTGGTTCATCG
                      ____________________________________________________________
consensus             AGGTGGCCGTACAAACAGCTAAGATGAAGAGCAGTGTCTCCATCTTCAACTGGTTCATCG
 
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rJMSF020J14-          ATGCTGCTTAAGTTATCTAGGGCATGGCGAAGGGATTCTAGGTCGCCGCGCTCGGCGGCC
JMFF048G11+           ATGCTGCTTAAGTTATCTAGGGCATGGCGAAGGGATTCTAGGTCGCCGCGCTCGGCGGCC
JMSF020J14+           ATGCTGCTTAAGTTATCTAGGGCATGGCGAAGGGATTCTAGGTCGCCGCGCTCGGCGGCC
                      ____________________________________________________________
consensus             ATGCTGCTTAAGTTATCTAGGGCATGGCGAAGGGATTCTAGGTCGCCGCGCTCGGCGGCC
 
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rJMSF020J14-          ATGGCAACTTGGCGGAAGTGAGGAGGCGTGTTGCTATCAACTTGCTCGAATTCGATT   
JMFF048G11+           ATGGCAACTTGGCGGAGGTGAGGAGGCGTGTTGCTATCAACTTGCTGGAATTCGATTTCT
JMSF020J14+           ATGGCAACTTGGCGGAGGTGAGGAGGCGTGTTGCTATCAACTTGCTCGAATTCGATTTCT
                      ____________________________________________________________
consensus             ATGGCAACTTGGCGGAGGTGAGGAGGCGTGTTGCTATCAACTTGCTCGAATTCGATTTCT
 
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JMFF048G11+           CCATCGATGAGGATACCGCCGTCTTCCTGGTCGTCTCCTATCATGCCGTTACGTCTCCCT
JMSF020J14+           CCATCGATGATGATACCGCCGTCTTCCTCGTCGTCTCCTATCATGCCGTTACGTCTCCCT
                      ____________________________________________________________
consensus             CCATCGATGATGATACCGCCGTCTTCCTGGTCGTCTCCTATCATGCCGTTACGTCTCCCT
 
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JMFF048G11+           GGTACTGCCATCTCCTCCCTCTCACTGTGCCACGCTCCAACTACGTCTCGT         
JMSF020J14+           GGTACTGCCATCTCCTCCCTCTCACTGTGCCACGCTCCAACTACGTCTCGTCGTCAACTC
                      ____________________________________________________________
consensus             GGTACTGCCATCTCCTCCCTCTCACTGTGCCACGCTCCAACTACGTCTCGTCGTCAACTC