Contig 007862:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020O21Sequence304007862 (3)ref|XP_002282769.1|4e-05PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera] emb|CBI16887.702009750 (3)ref|XP_009631893.1|1e-95PREDICTED: proline dehydrogenase 2, mitochondrial [Nicotiana tomentosiformis]
JMSF020E13Sequence553007862 (3)ref|XP_009631893.1|3e-28PREDICTED: proline dehydrogenase 2, mitochondrial [Nicotiana tomentosiformis]772009750 (3)ref|XP_009611325.1|1e-116PREDICTED: proline dehydrogenase 2, mitochondrial-like [Nicotiana tomentosiform
JMSF027I06Sequence666007862 (3)ref|XP_004232110.1|7e-38PREDICTED: proline dehydrogenase 2, mitochondrial [Solanum lycopersicum]652007407 (31)ref|XP_007207335.1|4e-95hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti

Alignment

This contig is upended


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JMSF027I06+                                                       AATCATGTAATAGNTG
                      ____________________________________________________________
consensus                                                         AATCATGTAATAGNTG
 
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JMSF027I06+           GATTGCACATTAATGATTATATTAAAGAAAGTTACGCAACTAATTAATATCTTACCGGCG
                      ____________________________________________________________
consensus             GATTGCACATTAATGATTATATTAAAGAAAGTTACGCAACTAATTAATATCTTACCGGCG
 
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JMSF027I06+           GTAGAGACTTGGCGGAGTCGACGGTTTGAAGGATATCATTCATACTCCGATCACACGATT
                      ____________________________________________________________
consensus             GTAGAGACTTGGCGGAGTCGACGGTTTGAAGGATATCATTCATACTCCGATCACACGATT
 
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JMSF027I06+           TTGTCGTGGGAGTGCTCCGACCCGTAATCCAGCATAGCCTTAATGCCGGTCTCCGACATG
JMSF020E13+                                                          GGTCTCCGACATG
                      ____________________________________________________________
consensus             TTGTCGTGGGAGTGCTCCGACCCGTAATCCAGCATAGCCTTAATGCCGGTCTCCGACATG
 
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JMSF027I06+           CCGGCGACGGTCCGGGCAACTTCCTCCAAATCCCTGCCGGCGCAAAATTGGCCGTAAAAC
JMSF020E13+           CCGGCGANGGTCCGGGCAACTTCCTCCAAATCCCTGCCGGCGCAAAATTGGCCGTAAAAC
                      ____________________________________________________________
consensus             CCGGCGACGGTCCGGGCAACTTCCTCCAAATCCCTGCCGGCGCAAAATTGGCCGTAAAAC
 
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JMSF027I06+           GTACGCTCGACGAGACCCATCACCGTTTCCCGAACCACCGGAATCTCCATGAGCCGCGAA
JMSF020E13+           GTACGCTCGACGAGACCCATCACCGTTTCCCGAACCACCGGAATCTCCATGAGCCGCGAA
                      ____________________________________________________________
consensus             GTACGCTCGACGAGACCCATCACCGTTTCCCGAACCACCGGAATCTCCATGAGCCGCGAA
 
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JMSF027I06+           TTCATCACCCGAATACCCGCGTCGACGGCGGGCTCGATTGCCAGCACGTGAAGCGCGACG
JMFF020O21+                                                           TGAAGCGCGACG
JMSF020E13+           TTCATCACCCGAATACCCGCGTCGANGGCGGGCTCGATTGCCAGCACGTGAAGCGCGACG
                      ____________________________________________________________
consensus             TTCATCACCCGAATACCCGCGTCGACGGCGGGCTCGATTGCCAGCACGTGAAGCGCGACG
 
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JMSF027I06+           GCGGATTTCACCAACTTCGACGTCCGCACCGACAAAAACAGCTCCTTGGCATCCTCAAAG
JMFF020O21+           GCGGATTTCACCAACTTCGACGTCCGCACCGACAAAAACAGCTCCTTGGCATCCTCAAAG
JMSF020E13+           GCGGATTTCACCAACTTCGACGTCCGCACCGACAAAAACAGCTCCTTGGCATCNTCAAAG
                      ____________________________________________________________
consensus             GCGGATTTCACCAACTTCGACGTCCGCACCGACAAAAACAGCTCCTTGGCATCCTCAAAG
 
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JMSF027I06+           TCGAGGACCGATTTGGCGGCGGCGGCGGCGGGAGTTGGGTCGGGCTTTTCGGCAAAGTTG
JMFF020O21+           TCGAGGACNGATTTGGCGGCGGCGGCGGCGGGAGTTGGGTCGGGCTTTTCGGCAAAGTTG
JMSF020E13+           TCGAGGACCGATTTGGCGGCGGCGGCGGCGGGAGTTGGGTCGGGCTTTTCGGCAAAGTTG
                      ____________________________________________________________
consensus             TCGAGGACCGATTTGGCGGCGGCGGCGGCGGGAGTTGGGTCGGGCTTTTCGGCAAAGTTG
 
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JMSF027I06+           AGCGGCGGCGGGAGTTGGGTGGTGAATGACGAGGGAGCCGAGTTCAGACGCCGGACGAAA
JMFF020O21+           AGCGGCGGCGGGAGTTGGGTGGTGAATGACGAGGGAGCCGAGTTCAGACGCCGGACGAAA
JMSF020E13+           AGCGGCGGCGGGAGTTGGGTGGTGAATGACGAGGGAGCCGAGTTCAGACGCCGGACGAAA
                      ____________________________________________________________
consensus             AGCGGCGGCGGGAGTTGGGTGGTGAATGACGAGGGAGCCGAGTTCAGACGCCGGACGAAA
 
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JMSF027I06+           CGGGGCAGACTCTTCGCGATTTTTCCGGGATTCCCTACACGGCTTGCCATTAACGAAACC
JMFF020O21+           CGGGGCAGACTCTTCGCGATTTTTCCGGGATTCCCTACACGGCTTGCCATTAACGAAACC
JMSF020E13+           CGGGGCAGACTCTTAGCGATTTTTCCGGGATTCCCTACACGGCTTGCCATTAACGAAACC
                      ____________________________________________________________
consensus             CGGGGCAGACTCTTCGCGATTTTTCCGGGATTCCCTACACGGCTTGCCATTAACGAAACC
 
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JMSF027I06+           GATCTTGATTCTTGTCTTCTTGATTCTCTCTCTCGTCCGATAAAAC              
JMFF020O21+           GATCTTGATTCTTGTCTTCTTGATTCTCTCTCTCGTCCGATAAAAC              
JMSF020E13+           GATCTTGATTCTTGTCTTCTTGATTCTCTCTCTCGTCCGATAAAACTGTAACAATATCCG
                      ____________________________________________________________
consensus             GATCTTGATTCTTGTCTTCTTGATTCTCTCTCTCGTCCGATAAAACTGTAACAATATCCG
 
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JMSF020E13+           ATGAACTGCATCGACTATTTAACGAAGTCATTTAACTTATTATGATTCATGCACCCCACA
                      ____________________________________________________________
consensus             ATGAACTGCATCGACTATTTAACGAAGTCATTTAACTTATTATGATTCATGCACCCCACA