Contig 007859:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014I16Sequence500007859 (3)ref|XP_009620236.1|3e-58PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nicotian761002553 (3)ref|XP_006346080.1|4e-97PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum
JMFF025D11Sequence591007859 (3)ref|XP_009620236.1|2e-68PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nicotian723002553 (3)ref|XP_004244333.1|7e-95PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum
JMSF019G07Sequence221007859 (3)ref|XP_009793722.1|2e-04PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nicotian756002553 (3)ref|XP_006346080.1|1e-99PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF025D11+ TCATCATACAGAACATATCTCTAGCAGCTTCAACATGGC
                      ____________________________________________________________
consensus TCATCATACAGAACATATCTCTAGCAGCTTCAACATGGC
 
. : . : . : . : . : . :
JMFF014I16+ TTCACAGA
JMFF025D11+ CCTGATTCATATAGCCTGTAATCATAGAGTTCATCACAAGCACTCTATCTTCTTCACAGA
                      ____________________________________________________________
consensus CCTGATTCATATAGCCTGTAATCATAGAGTTCATCACAAGCACTCTATCTTCTTCACAGA
 
. : . : . : . : . : . :
JMFF014I16+ ATTCATCAAACACTTGTTCTGCAGAATCCAGGCAGCCAGCATTGGAGTACATATGAATCA
JMFF025D11+ ATTCATCAAACACTTGTTCTGCAGAATCCAGGCAGCCAGCATTGGAGTACATATGAATCA
                      ____________________________________________________________
consensus ATTCATCAAACACTTGTTCTGCAGAATCCAGGCAGCCAGCATTGGAGTACATATGAATCA
 
. : . : . : . : . : . :
JMFF014I16+ GCGAGCTAGAAACGTGAGTATTCGGCTTCACCCCCGCCTTGATTATCCGGGCATGCACTT
JMFF025D11+ GCGAGCTAGAAACGTGAGTATTCGGCTTCACCCCCGCCTTGATTATCCGGGCATGCACTT
                      ____________________________________________________________
consensus GCGAGCTAGAAACGTGAGTATTCGGCTTCACCCCCGCCTTGATTATCCGGGCATGCACTT
 
. : . : . : . : . : . :
JMFF014I16+ GTTTACCTTCACAAATCGCATTCACGCGAGAACATGCTTTGAGAGCAAAAGTGTAAGTGT
JMFF025D11+ GTTTACCTTCACAAATCGCATTCACGCGAGAACATGCTTTGAGAGCAAAAGTGTAAGTGT
                      ____________________________________________________________
consensus GTTTACCTTCACAAATCGCATTCACGCGAGAACATGCTTTGAGAGCAAAAGTGTAAGTGT
 
. : . : . : . : . : . :
JMFF014I16+ GGTTATCCTCTCTGATGCCTTCTGCACACATTCTAGCATACATCACCAGCGACTCATTCG
JMFF025D11+ GGTTATCCTCTCTGATGCCTTCTGCACACATTCTAGCATACATCACCAGCGACTCATTCG
                      ____________________________________________________________
consensus GGTTATCCTCTCTGATGCCTTCTGCACACATTCTAGCATACATCACCAGCGACTCATTCG
 
. : . : . : . : . : . :
JMFF014I16+ CCTGCTTGCCCAGAATCAGGCCTCTGATCATGACATTATACGTGAATGCATCGGGTGACT
JMFF025D11+ CCTGCTTGCCCAGAATCAGGCCTCTGATCATGACATTATACGTGAATGCATCGGGTGACT
                      ____________________________________________________________
consensus CCTGCTTGCCCAGAATCAGGCCTCTGATCATGACATTATACGTGAATGCATCGGGTGACT
 
. : . : . : . : . : . :
JMFF014I16+ GAATCGATTCAAAGACAGATGAACCATGATCAAGTTCAAATGATCCAACGTAGGATTGCA
JMFF025D11+ GAATCGATTCAAAGACAGATGAACCATGATCAAGTTCAAATGATCCAACGTAGGATTGCA
                      ____________________________________________________________
consensus GAATCGATTCAAAGACAGATGAACCATGATCAAGTTCAAATGATCCAACGTAGGATTGCA
 
. : . : . : . : . : . :
JMFF014I16+ GCAGCTTTGCTTGGTTCTGTCTGCGTTGAATTGATCCTGAGACGATTAACTGTGCGTGTA
JMFF025D11+ GCAGCTTTGCTTGGTTCTGTCTGCGTTGAATTGATCCTGAGACGATTAACTGTGCGTGTA
JMSF019G07+ TCTGCGTTGAATTGATCCTGAGACGATTAACTGTGCGTGTA
                      ____________________________________________________________
consensus GCAGCTTTGCTTGGTTCTGTCTGCGTTGAATTGATCCTGAGACGATTAACTGTGCGTGTA
 
. : . : . : . : . : . :
JMFF014I16+ TTTGTTTGATTTCTGCAGAGTAACGGCACATTTGAAGCAGCAACAGATGGGCGGAAGCGA
JMFF025D11+ TTTGTTTGATTTCTGCAGAGTAACGGCACATTTGAAGCAGCAACAGATGGGCGGAAGCGA
JMSF019G07+ TTTGTTTGATTTCTGCAGAGTAACGGCACATTTGAAGCAGCAACAGATGGGCGGAAGCGA
                      ____________________________________________________________
consensus TTTGTTTGATTTCTGCAGAGTAACGGCACATTTGAAGCAGCAACAGATGGGCGGAAGCGA
 
. : . : . : . : . : . :
JMFF014I16+ TTCTATTTACAC
JMFF025D11+ TTCTATTTACAC
JMSF019G07+ TTCTATTTACACGAAAGGTTTGAGATTCTGCATTATTATTATTATTATTGTTGTGGTTTA
                      ____________________________________________________________
consensus TTCTATTTACACGAAAGGTTTGAGATTCTGCATTATTATTATTATTATTGTTGTGGTTTA
 
. : . : . : . : . : . :
JMSF019G07+ TTATTAGGAGAGAAGAATTGGAAGCAAGAGCCATGTAGATGGTCCTTGAGCTTTCACTTC
                      ____________________________________________________________
consensus TTATTAGGAGAGAAGAATTGGAAGCAAGAGCCATGTAGATGGTCCTTGAGCTTTCACTTC