Contig 007858:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009G18Sequence427007858 (3)752014962ref|XP_011075373.1|2e-98PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Sesamum ind
JMSF015J14Sequence598007858 (3)ref|XP_009611066.1|5e-34PREDICTED: probable inactive tRNA-specific adenosine deaminase-like protein 3 i775013927 (2)emb|CDO97564.1|2e-65unnamed protein product [Coffea canephora]
JMSF019E10Sequence245007858 (3)770013927 (2)emb|CDO97564.1|2e-65unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF015J14+                       ATGCAGCATATTTGCAGACNTTTGTGATGAAAGTACTCAACTGGTATG
                      ____________________________________________________________
consensus                         ATGCAGCATATTTGCAGACNTTTGTGATGAAAGTACTCAACTGGTATG
 
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JMSF015J14+           ATTTCACAAGCTCCAGCACATTGCTNGGCATGCCACCAGCATCTTCATTTGTCATAGATA
                      ____________________________________________________________
consensus             ATTTCACAAGCTCCAGCACATTGCTNGGCATGCCACCAGCATCTTCATTTGTCATAGATA
 
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JMSF015J14+           ACATTAAAGATAACTGAGGTTTTCCTACCAGAAGCCAATTGTTATTGTAAAATTCAACAA
                      ____________________________________________________________
consensus             ACATTAAAGATAACTGAGGTTTTCCTACCAGAAGCCAATTGTTATTGTAAAATTCAACAA
 
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JMSF015J14+           AAAGAGAGTATAATTTACACACCACATCACAACTTTCCCAGGAATAAGTATCTTATTACC
                      ____________________________________________________________
consensus             AAAGAGAGTATAATTTACACACCACATCACAACTTTCCCAGGAATAAGTATCTTATTACC
 
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JMSF015J14+           TCCATCAATGCACTTCTTGCGTATCCGCTTTACATGCCGCAGGTTTTCCAATGGACAAAT
                      ____________________________________________________________
consensus             TCCATCAATGCACTTCTTGCGTATCCGCTTTACATGCCGCAGGTTTTCCAATGGACAAAT
 
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JMSF015J14+           TTGATTTAACTTCCTTACTAAAGTATTAGCATCTTTAGGTTCAACTTCAGCAGCATACAC
                      ____________________________________________________________
consensus             TTGATTTAACTTCCTTACTAAAGTATTAGCATCTTTAGGTTCAACTTCAGCAGCATACAC
 
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JMSF015J14+           ATTCACGGTGGGTTGTAGGTGAGGCAGAACAGGGGGCTTATCAGGAATGTGAACGATTTT
                      ____________________________________________________________
consensus             ATTCACGGTGGGTTGTAGGTGAGGCAGAACAGGGGGCTTATCAGGAATGTGAACGATTTT
 
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JMSF015J14+           CCAGCCACACTCAACTTCATTGCTACTACTCATTGTCCCTTCAACTTCTGGGCAGTTCGC
JMSF009G18+                                                              GCAGTTCGC
JMSF019E10+                                                          CTGGGCAGTTCGC
                      ____________________________________________________________
consensus             CCAGCCACACTCAACTTCATTGCTACTACTCATTGTCCCTTCAACTTCTGGGCAGTTCGC
 
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JMSF015J14+           AGTCTTCGGACTTCGCCGGTGAGGAGCCGAGGAGACGAAGGAGTATTGAACGCCGGTGAG
JMSF009G18+           AGTCTTCGCACTTCGCTGGTGAGGAGCCGAGGAGACGAAGGAGTATTGAACGCCGGTGAG
JMSF019E10+           AGTCTTCGGACTTCGCCGGTGAGGAGCCGAGGAGACGAAGGAGTATTGAACGCCGGTGAG
                      ____________________________________________________________
consensus             AGTCTTCGGACTTCGCCGGTGAGGAGCCGAGGAGACGAAGGAGTATTGAACGCCGGTGAG
 
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JMSF015J14+           GAGCC                                                       
JMSF009G18+           GAGCC                                                       
JMSF019E10+           GAGCCGAAGTCGCAGGTTGCGTCGCGAGGGGCTGAGCAGTGAGCGTAGGGGTTTGATTTT
                      ____________________________________________________________
consensus             GAGCCGAAGTCGCAGGTTGCGTCGCGAGGGGCTGAGCAGTGAGCGTAGGGGTTTGATTTT
 
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JMSF019E10+           AGGGATTACAATTTTAGGGCTTAGGCTTTGATTTTACTGGAAAGAGATACACGCAGAGTC
                      ____________________________________________________________
consensus             AGGGATTACAATTTTAGGGCTTAGGCTTTGATTTTACTGGAAAGAGATACACGCAGAGTC