Contig 007857:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022N13Sequence486007857 (4)ref|XP_009800735.1|129PREDICTED: uncharacterized protein LOC104246593 [Nicotiana sylvestris]732001108 (4)ref|XP_009800735.1|305PREDICTED: uncharacterized protein LOC104246593 [Nicotiana sylvestris]
JMFF040J03Sequence485007857 (4)ref|XP_009800735.1|116PREDICTED: uncharacterized protein LOC104246593 [Nicotiana sylvestris]650001108 (4)ref|XP_009800735.1|286PREDICTED: uncharacterized protein LOC104246593 [Nicotiana sylvestris]
JMFS064F06Sequence617007857 (4)ref|XP_009800735.1|141PREDICTED: uncharacterized protein LOC104246593 [Nicotiana sylvestris]
JMSF019E01Sequence269007857 (4)802001108 (4)ref|XP_009800735.1|327PREDICTED: uncharacterized protein LOC104246593 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS064F06+                                         AAGTTCGGCCCAGGCGTTGAATTAGTGATG
                      ____________________________________________________________
consensus                                           AAGTTCGGCCCAGGCGTTGAATTAGTGATG
 
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JMFS064F06+           CTTATTGATTGTGGCACAGATAAGCTGCCATTTTCCAACCCTCCTTGTTGATTCTCCTCA
                      ____________________________________________________________
consensus             CTTATTGATTGTGGCACAGATAAGCTGCCATTTTCCAACCCTCCTTGTTGATTCTCCTCA
 
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JMFS064F06+           TTTTCTTCACTCTGAAATTCCATTTCGCCGGAAACCTCCAGCTGAGGCCGGGGATTCTCC
                      ____________________________________________________________
consensus             TTTTCTTCACTCTGAAATTCCATTTCGCCGGAAACCTCCAGCTGAGGCCGGGGATTCTCC
 
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JMFS064F06+           TTCAGCAGTGCCCTAGCCGCCGCGATCGCCGCCGAGGCACGATCAATGACTTGCATTCT-
JMFF022N13+               GCAGTGCCNTAGCCGCCGCGATCGCCGCCGAGGCACGATCAATGACTTGCATTCT-
JMFF040J03+               GCAGTGCCCTAGCCGCCGCGATCGCCGCCGAGGCACGATCAATGACTTGCATTCTC
                      ____________________________________________________________
consensus             TTCAGCAGTGCCCTAGCCGCCGCGATCGCCGCCGAGGCACGATCAATGACTTGCATTCT-
 
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JMFS064F06+           CTGAATTCTATCTCTTTCCTCGGGCGAGAACTCGAGAATCTTCTGGAACTCGTTGCTCTT
JMFF022N13+           CTGAATTCTATCTCTTTCCTCGGGCGAGAACTCGAGAATCTTCTGGAACTCGTTGCTCTT
JMFF040J03+           CTGAATTCTATCTCTTTCCTCGGGCGAGAACTCGAGAATCTTCTGGAACTCGTTGCTCTT
                      ____________________________________________________________
consensus             CTGAATTCTATCTCTTTCCTCGGGCGAGAACTCGAGAATCTTCTGGAACTCGTTGCTCTT
 
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JMFS064F06+           CCTCTCCATCGCTTCCGGGCTGTCCTCCTCGTCGGCGCCGTCGTCGTCTTCATCGTCGCT
JMFF022N13+           CCTCTCCATCGCTTCCGGGCTGTCCTCCTCGTCGGCGCCGTCGTCGTCTTCATCGTCGCT
JMFF040J03+           CCTCTCCATCGCTTCCGGGCTGTCCTCCTCGTCGGCGCCGTCGTCGTCTTCATCGTCGCT
                      ____________________________________________________________
consensus             CCTCTCCATCGCTTCCGGGCTGTCCTCCTCGTCGGCGCCGTCGTCGTCTTCATCGTCGCT
 
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JMFS064F06+           GGATTTTCTACTGTTCTCCACGATCTTCTGGAAATCCAGAGACTTCCTCTCGCGATCCAT
JMFF022N13+           GGATTTTCTACTGTTCTCCACGATCTTCTGGAAATCCAGAGACTTCCTCTCGCGATCCAT
JMFF040J03+           GGATTTTCTACTGTTCTCCACGATCTTCTGGAAATCCAGAGACTTCCTCTCGCGATCCAT
                      ____________________________________________________________
consensus             GGATTTTCTACTGTTCTCCACGATCTTCTGGAAATCCAGAGACTTCCTCTCGCGATCCAT
 
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JMFS064F06+           CGCCGTCTTCCACATGTCCAAATACGACAATTCCTCTCCTCCTCCATCCGAGACTCTGAT
JMFF022N13+           CGCCGTCTTCCACATGTCCAAATACGACAATTCCTCTCCTCCTCCATCCGAGACTCTGAT
JMFF040J03+           CGCCGTCTTCCACATGTCCAAATACGACAATTCCTCTCCTCCTCCATCCGAGACTCTGAT
                      ____________________________________________________________
consensus             CGCCGTCTTCCACATGTCCAAATACGACAATTCCTCTCCTCCTCCATCCGAGACTCTGAT
 
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JMFS064F06+           TCTTGAGCTCTTCCTGCTACACACGAGGCTATTCCAGGCCGGCGGAGATTCTTTAGTAGA
JMFF022N13+           TCTTGAGCTCTTCCTGCTACACACGAGGCTATTCCAGGCCGGCGGAGATTCTTTAGTAGA
JMFF040J03+           TCTTGAGCTCTTCCTGCTACACACGAGGCTATTCCAGGCCGGCGGAGATTCTTTAGTAGA
JMSF019E01+                                          TTCCAGGCCGGCGGAGATTCTTTAGTAGA
                      ____________________________________________________________
consensus             TCTTGAGCTCTTCCTGCTACACACGAGGCTATTCCAGGCCGGCGGAGATTCTTTAGTAGA
 
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JMFS064F06+           AAAGGAAAATGGGTATTCTAGGTGGTGCTTTTGGGTTGCCGGGACGGCGGCGCGTGAGGC
JMFF022N13+           AAAGGAAAATGGGTATTCTAGGTGGTGCTTTTGGGTTGCCGGGACGGCGGCGCGTGAGGC
JMFF040J03+           AAAGGAAAATGGGTATTCTAGGTGGTGCTTTTGGGTTGCCGGGACGGCGGCGCGTGAGGC
JMSF019E01+           AAAGGAAAATGGGTATTCTAGGTGGTGCTTTTGGGTTGCCGGGACGGCGGCGCGTGAGGC
                      ____________________________________________________________
consensus             AAAGGAAAATGGGTATTCTAGGTGGTGCTTTTGGGTTGCCGGGACGGCGGCGCGTGAGGC
 
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JMFS064F06+           GACAGTCGGGTAAATAGTGTGGAAATGGCTCGCCATTGGGAAGTGT              
JMFF022N13+           GACAGTCGGGTAAATAGTGTGGAAATGGCTCGCCATTGGGAAGTGTTTTGCCGGTGCCGA
JMFF040J03+           GACAGTCGGGTAAATAGTGTGGAAATGGCTCGCCATTGGGAAGTGTNTTGCCGGTGCCGA
JMSF019E01+           GACAGTCGGGTAAATAGTGTGGAAATGGCTCGCCATTGGGAAGTGTTTTGCCGGTGCCGA
                      ____________________________________________________________
consensus             GACAGTCGGGTAAATAGTGTGGAAATGGCTCGCCATTGGGAAGTGTTTTGCCGGTGCCGA
 
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JMFF022N13+           GAAG                                                        
JMFF040J03+           GAAG                                                        
JMSF019E01+           GAAGGAGGTGGAGATCTCTGGGCGGTGTGTATTTATATAGGGAGTGTAAATTTGAGGTGG
                      ____________________________________________________________
consensus             GAAGGAGGTGGAGATCTCTGGGCGGTGTGTATTTATATAGGGAGTGTAAATTTGAGGTGG
 
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JMSF019E01+           ATTTTTTTTTTCAATTTTATAATTTTTTTTTCTGAGAATATTTTGTATCCACTGAACTTC
                      ____________________________________________________________
consensus             ATTTTTTTTTTCAATTTTATAATTTTTTTTTCTGAGAATATTTTGTATCCACTGAACTTC