Contig 007853:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS021G10Sequence623007853 (4)ref|XP_011096553.1|6e-53PREDICTED: potassium channel KAT3-like [Sesamum indicum]
JMFS120G01Sequence627007853 (4)ref|XP_009602722.1|3e-94PREDICTED: potassium channel KAT3-like isoform X1 [Nicotiana tomentosiformis]
JMSF018P07Sequence436007853 (4)ref|XP_009602722.1|4e-59PREDICTED: potassium channel KAT3-like isoform X1 [Nicotiana tomentosiformis]750017125ref|XP_008383482.1|1e-35PREDICTED: potassium channel AKT1-like [Malus domestica]
JMSF024B14Sequence683007853 (4)ref|XP_009602723.1|1e-123PREDICTED: potassium channel KAT3-like isoform X2 [Nicotiana tomentosiformis]776013897 (14)ref|XP_004245965.1|8e-113PREDICTED: 60S ribosomal protein L13-1-like [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF024B14+                                             GGATATGCTGCTCCAATCCAGGTATT
                      ____________________________________________________________
consensus                                               GGATATGCTGCTCCAATCCAGGTATT
 
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JMSF024B14+           TTTAGGATCAGGATATCTATCTGCAATCATGTAGTTAAAGCATCCAGCACAATGTACTGC
                      ____________________________________________________________
consensus             TTTAGGATCAGGATATCTATCTGCAATCATGTAGTTAAAGCATCCAGCACAATGTACTGC
 
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JMSF024B14+           AAACAAAGTTACAGATATGAGTTTTGTGCAGCGTGTCCAGAAGTAGTTAAACCGGATGTC
JMFS120G01+                                                         TTAAACCGGATGTA
                      ____________________________________________________________
consensus             AAACAAAGTTACAGATATGAGTTTTGTGCAGCGTGTCCAGAAGTAGTTAAACCGGATGTC
 
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JMSF024B14+           CTTCTCAAGTCTTGCAAACAGGGCGCTTACACGCCTCAGGCGCCAAAGCCTGAGCATGCT
JMFS120G01+           CTTCTCAAGTCTTGCAAACAGGGCGCTTACACGCCTCAGGCGCCAAAGCCTGAGCATGCT
                      ____________________________________________________________
consensus             CTTCTCAAGTCTTGCAAACAGGGCGCTTACACGCCTCAGGCGCCAAAGCCTGAGCATGCT
 
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JMSF024B14+           CAGCAATTTGAAGCCTAGTCCGCCACTTGTTTTGTGATCTGTGAAAAGGAGGCTGAGAGC
JMFS120G01+           CAGCAATTTGAAGCCTAGTCCGCCACTTGTTTTGTGATCTGTGAAAAGGAGGCTGAGAGC
JMFS021G10+                           AGTCCGCCACTTGTTTTGTGATCTGTGAAAAGGAGGCTGAGAGC
                      ____________________________________________________________
consensus             CAGCAATTTGAAGCCTAGTCCGCCACTTGTTTTGTGATCTGTGAAAAGGAGGCTGAGAGC
 
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JMSF024B14+           TTGGAATGGCACAGTTGAGGCCACATCAAACATGAACCATGTTGATAAATACCTTATTGC
JMFS120G01+           TTGGAATGGCACAGTTGAGGCCACATCAAACATGAACCATGTTGATAAATACCTTATTGC
JMFS021G10+           TTGGAATGGCACAGTTGAGGCCACATCAAACATGAACCATGTTGATAAATACCTTATTGC
                      ____________________________________________________________
consensus             TTGGAATGGCACAGTTGAGGCCACATCAAACATGAACCATGTTGATAAATACCTTATTGC
 
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JMSF024B14+           TATTTTCCTAGGATTATCTACAAGCAGGTATGATTGACTATCGAGGTATGCCACGAAGAA
JMFS120G01+           TATTTTCCTAGGATTATCTACAAGCAGGTATGATTGACTATCGAGGTATGCCACGAAGAA
JMFS021G10+           TATTTTCCTAGGATTATCTACAAGCAGGTATGATTGACTATCGAGGTATGCCACGAAGAA
                      ____________________________________________________________
consensus             TATTTTCCTAGGATTATCTACAAGCAGGTATGATTGACTATCGAGGTATGCCACGAAGAA
 
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JMSF024B14+           TGTTAGAAAGATGTCTATTGCAAAGAAGCAGTTGACAATGTTGTCAATGATGAACAGCGC
JMFS120G01+           TGTTAGAAAGATGTCTATTGCAAAGAAGCAGTTGACAATGTTGTCAATGATGAACAGCGC
JMFS021G10+           TGTTAGAAAGATGTCTATTGCAAAGAAGCAGTTGACAATGTTGTCAATGATGAACAGCGC
                      ____________________________________________________________
consensus             TGTTAGAAAGATGTCTATTGCAAAGAAGCAGTTGACAATGTTGTCAATGATGAACAGCGC
 
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JMSF024B14+           ATCTTCCTTGTACGTGAGGAATGCAAACTCAAAGGGAGAAATCCAGGCAGAGTAAATGAC
JMFS120G01+           ATCTTCCTTGTACGTGAGGAATGCAAACTCAAAGGGAGAAATCCAGGCAGAGTAAATGAC
JMFS021G10+           ATCTTCCTTGTACGTGAGGAATGCAAACTCAAAGGGAGAAATCCAGGCAGAGTAAATGAC
                      ____________________________________________________________
consensus             ATCTTCCTTGTACGTGAGGAATGCAAACTCAAAGGGAGAAATCCAGGCAGAGTAAATGAC
 
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JMSF024B14+           CAGAATGACTAGAAACATCTCCCAAGCCCTG                             
JMFS120G01+           CAGAATGACTAGAAACATCTCCCAAGCCCTG                             
JMFS021G10+           CAGAATGACTAGAAACATCTCCCAAGCCCTGAAAGAATGAGAGAAAGAGAGAATCAGCTG
                      ____________________________________________________________
consensus             CAGAATGACTAGAAACATCTCCCAAGCCCTGAAAGAATGAGAGAAAGAGAGAATCAGCTG
 
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JMFS021G10+           TACGTTGTCCATGCCTACAAGGCCGGGGAAATAGTCAAAGGTCATCTTCTCACCTGTACC
JMSF018P07+                                                               CCTGTACC
                      ____________________________________________________________
consensus             TACGTTGTCCATGCCTACAAGGCCGGGGAAATAGTCAAAGGTCATCTTCTCACCTGTACC
 
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JMFS021G10+           GGGGATCAAATGGTGAATTTATGCATTTTCTAAGTTTTGTAGTTTGGTTGATTCTGGCTC
JMSF018P07+           GGGGATCAAATGGTGAATTTATGCATTTTCTAAGTTTTGTAGTTTGGTTGATTCTGGCTC
                      ____________________________________________________________
consensus             GGGGATCAAATGGTGAATTTATGCATTTTCTAAGTTTTGTAGTTTGGTTGATTCTGGCTC
 
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JMFS021G10+           CAAGAGAAGGGAGGAGATCACTGGAGAAGAAACCATAATTGGTTTCTGTTTTCGGTTGTA
JMSF018P07+           CAAGAGAAGGGAGGAGATCACTGGAGAAGAAACCATAATTGGTTTCTGTTTTCGGTTGTA
                      ____________________________________________________________
consensus             CAAGAGAAGGGAGGAGATCACTGGAGAAGAAACCATAATTGGTTTCTGTTTTCGGTTGTA
 
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JMFS021G10+           ACTCGTCAACACAGAACCGCTTTAAGCAATTTCTAGCATAGGAAAACAACATATTGCTTT
JMSF018P07+           ACTCGTCAACACAGAACCGCTTTAAGCAATTTCTAGCATAGGAAAACAACATATTGCTTT
                      ____________________________________________________________
consensus             ACTCGTCAACACAGAACCGCTTTAAGCAATTTCTAGCATAGGAAAACAACATATTGCTTT
 
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JMFS021G10+           TGCAGGTCTGAATCCTTGGAGAGCTCAAGGAGAAGTCTG                     
JMSF018P07+           TGCAGGTCTGAATCCTTGGAGAGCTCAAGGAGAAGTCTGTCTGCTAAAGCTCTTTTGATC
                      ____________________________________________________________
consensus             TGCAGGTCTGAATCCTTGGAGAGCTCAAGGAGAAGTCTGTCTGCTAAAGCTCTTTTGATC