clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF040N15 | Sequence | 480 | 007850 (3) | ref|XP_009587566.1| | 2e-62 | PREDICTED: laccase-17-like [Nicotiana tomentosiformis] | 757 | 012397 (3) | ref|XP_011094887.1| | 3e-84 | PREDICTED: laccase-17-like [Sesamum indicum] |
JMSF018I23 | Sequence | 366 | 007850 (3) | ref|XP_009796361.1| | 3e-35 | PREDICTED: laccase-17-like [Nicotiana sylvestris] | 739 | 012397 (3) | ref|XP_011077639.1| | 5e-99 | PREDICTED: laccase-17-like [Sesamum indicum] |
JMSF049D09 | Sequence | 681 | 007850 (3) | ref|XP_009796361.1| | 2e-108 | PREDICTED: laccase-17-like [Nicotiana sylvestris] | 748 | 012397 (3) | ref|XP_011094887.1| | 2e-87 | PREDICTED: laccase-17-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF049D09+ TCCGGGAAGTCCATTGATGGTATAGGCATCA
____________________________________________________________
consensus TCCGGGAAGTCCATTGATGGTATAGGCATCA
. : . : . : . : . : . :
JMSF049D09+ GAGACATTTGGACCTCCACCTGTTTGTAAAGCTTGGCTAATTATTGCCTCAGTATCACCA
____________________________________________________________
consensus GAGACATTTGGACCTCCACCTGTTTGTAAAGCTTGGCTAATTATTGCCTCAGTATCACCA
. : . : . : . : . : . :
JMSF049D09+ TTGAACCATTCACCAAAGATGATGGGTACTTCCTTGTAGGGTTTGACGAATGGGTAAGAA
____________________________________________________________
consensus TTGAACCATTCACCAAAGATGATGGGTACTTCCTTGTAGGGTTTGACGAATGGGTAAGAA
. : . : . : . : . : . :
JMSF049D09+ ACATTTTTCTTTGGGAGGATAATAATAGGACCATGAAGTGTTGCTCTAAGCCAAGAGATG
JMFF040N15+ AAGAGATG
____________________________________________________________
consensus ACATTTTTCTTTGGGAGGATAATAATAGGACCATGAAGTGTTGCTCTAAGCCAAGAGATG
. : . : . : . : . : . :
JMSF049D09+ TGTGCATGCCAAAATAAAGTCCCTCTTTGTCCAACAATGGTGTACTTATACACATAGCTT
JMFF040N15+ TGTGCATGCCAAAATAAAGTCCCTCTTTGTCCAACAATGGTGTACTTATACACATAGCTT
____________________________________________________________
consensus TGTGCATGCCAAAATAAAGTCCCTCTTTGTCCAACAATGGTGTACTTATACACATAGCTT
. : . : . : . : . : . :
JMSF049D09+ TGTCCAGTTTGAATGGGACATTGCGTTATGTATGCTGGTCCATCTGCCCATCCGCTACGA
JMFF040N15+ TGTCCAGTTTGAATGGGACATTGCGTTATGTATGCTGGTCCATCTGCCCATCCGCTACGA
JMSF018I23+ CGA
____________________________________________________________
consensus TGTCCAGTTTGAATGGGACATTGCGTTATGTATGCTGGTCCATCTGCCCATCCGCTACGA
. : . : . : . : . : . :
JMSF049D09+ AGTTGCCGAATCCCATGCCAGTGAATTGAAATATTATTAGCAACATGATTATTGACTTTT
JMFF040N15+ AGTTGCCGAATCCCATGCCAGTGAATTGAAATATTATTAGCAACATGATTATTGACTTTT
JMSF018I23+ AGTTGCCGAATTCCATGCCAGTGAATCGAAATATTGTTAGCAACATGATTATTGACTTTT
____________________________________________________________
consensus AGTTGCCGAATCCCATGCCAGTGAATTGAAATATTATTAGCAACATGATTATTGACTTTT
. : . : . : . : . : . :
JMSF049D09+ ATTAGTAGGCGGTCGCCCTCCCTAGCTAGAATTGGAGGTCCCGGATATTTGCCATTGACC
JMFF040N15+ ATTAGTAGGCGGTCGCCCTCCCTAGCTAGAATTGGAGGTCCCGGATATTTGCCATTGACC
JMSF018I23+ ATTAATAGGCGATCACCCTCCCTAGCTAGAATCGGAGGTCCTGGAAATTTGCCATTGACC
____________________________________________________________
consensus ATTAGTAGGCGGTCGCCCTCCCTAGCTAGAATTGGAGGTCCCGGATATTTGCCATTGACC
. : . : . : . : . : . :
JMSF049D09+ GTAACAATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTAAACTCG
JMFF040N15+ GTAACAATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTAAACTCG
JMSF018I23+ GTAACCATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTGAACTCA
____________________________________________________________
consensus GTAACAATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTAAACTCG
. : . : . : . : . : . :
JMSF049D09+ TAGTGCCTAGTTAAGGCTTGTGCAGGTTGAGGAAGGAGAAACAAAGCTAGAAGTGGAAGT
JMFF040N15+ TAGTGCCTAGTTAAGGCTTGTGCAGGTTGAGGAAGGAGAAACAAAGCTAGAAGTGGAAGT
JMSF018I23+ TAGTGCCTAGTTTCGGCTTGTGCATGTTGAGGAAGGAGACACAAAGCTAGAAGTGGAAGT
____________________________________________________________
consensus TAGTGCCTAGTTAAGGCTTGTGCAGGTTGAGGAAGGAGAAACAAAGCTAGAAGTGGAAGT
. : . : . : . : . : . :
JMSF049D09+ ATGATTGCCATTGAAAACATTTGTGGAAGATATGTTGCAGCCATGACGAT
JMFF040N15+ ATGATTGCCATTGAAAACATTTGTGGAAGATATGTTGCAGCCATGACGAT
JMSF018I23+ ATGATTGCCATTGAAAATATTTGTGAAAAATATGTTGCAGCCATTACGATATAATAATGT
____________________________________________________________
consensus ATGATTGCCATTGAAAACATTTGTGGAAGATATGTTGCAGCCATGACGATATAATAATGT
. : . : . : . : . : . :
JMSF018I23+ GTAGTTGGAGAAGATCAGAGTGCTTATAATTAATTATATATGTTGAGAGATTGTTGAATC
____________________________________________________________
consensus GTAGTTGGAGAAGATCAGAGTGCTTATAATTAATTATATATGTTGAGAGATTGTTGAATC