Contig 007850:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N15Sequence480007850 (3)ref|XP_009587566.1|2e-62PREDICTED: laccase-17-like [Nicotiana tomentosiformis]757012397 (3)ref|XP_011094887.1|3e-84PREDICTED: laccase-17-like [Sesamum indicum]
JMSF018I23Sequence366007850 (3)ref|XP_009796361.1|3e-35PREDICTED: laccase-17-like [Nicotiana sylvestris]739012397 (3)ref|XP_011077639.1|5e-99PREDICTED: laccase-17-like [Sesamum indicum]
JMSF049D09Sequence681007850 (3)ref|XP_009796361.1|2e-108PREDICTED: laccase-17-like [Nicotiana sylvestris]748012397 (3)ref|XP_011094887.1|2e-87PREDICTED: laccase-17-like [Sesamum indicum]

Alignment

This contig is upended


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JMSF049D09+                                        TCCGGGAAGTCCATTGATGGTATAGGCATCA
                      ____________________________________________________________
consensus                                          TCCGGGAAGTCCATTGATGGTATAGGCATCA
 
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JMSF049D09+           GAGACATTTGGACCTCCACCTGTTTGTAAAGCTTGGCTAATTATTGCCTCAGTATCACCA
                      ____________________________________________________________
consensus             GAGACATTTGGACCTCCACCTGTTTGTAAAGCTTGGCTAATTATTGCCTCAGTATCACCA
 
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JMSF049D09+           TTGAACCATTCACCAAAGATGATGGGTACTTCCTTGTAGGGTTTGACGAATGGGTAAGAA
                      ____________________________________________________________
consensus             TTGAACCATTCACCAAAGATGATGGGTACTTCCTTGTAGGGTTTGACGAATGGGTAAGAA
 
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JMSF049D09+           ACATTTTTCTTTGGGAGGATAATAATAGGACCATGAAGTGTTGCTCTAAGCCAAGAGATG
JMFF040N15+                                                               AAGAGATG
                      ____________________________________________________________
consensus             ACATTTTTCTTTGGGAGGATAATAATAGGACCATGAAGTGTTGCTCTAAGCCAAGAGATG
 
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JMSF049D09+           TGTGCATGCCAAAATAAAGTCCCTCTTTGTCCAACAATGGTGTACTTATACACATAGCTT
JMFF040N15+           TGTGCATGCCAAAATAAAGTCCCTCTTTGTCCAACAATGGTGTACTTATACACATAGCTT
                      ____________________________________________________________
consensus             TGTGCATGCCAAAATAAAGTCCCTCTTTGTCCAACAATGGTGTACTTATACACATAGCTT
 
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JMSF049D09+           TGTCCAGTTTGAATGGGACATTGCGTTATGTATGCTGGTCCATCTGCCCATCCGCTACGA
JMFF040N15+           TGTCCAGTTTGAATGGGACATTGCGTTATGTATGCTGGTCCATCTGCCCATCCGCTACGA
JMSF018I23+                                                                    CGA
                      ____________________________________________________________
consensus             TGTCCAGTTTGAATGGGACATTGCGTTATGTATGCTGGTCCATCTGCCCATCCGCTACGA
 
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JMSF049D09+           AGTTGCCGAATCCCATGCCAGTGAATTGAAATATTATTAGCAACATGATTATTGACTTTT
JMFF040N15+           AGTTGCCGAATCCCATGCCAGTGAATTGAAATATTATTAGCAACATGATTATTGACTTTT
JMSF018I23+           AGTTGCCGAATTCCATGCCAGTGAATCGAAATATTGTTAGCAACATGATTATTGACTTTT
                      ____________________________________________________________
consensus             AGTTGCCGAATCCCATGCCAGTGAATTGAAATATTATTAGCAACATGATTATTGACTTTT
 
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JMSF049D09+           ATTAGTAGGCGGTCGCCCTCCCTAGCTAGAATTGGAGGTCCCGGATATTTGCCATTGACC
JMFF040N15+           ATTAGTAGGCGGTCGCCCTCCCTAGCTAGAATTGGAGGTCCCGGATATTTGCCATTGACC
JMSF018I23+           ATTAATAGGCGATCACCCTCCCTAGCTAGAATCGGAGGTCCTGGAAATTTGCCATTGACC
                      ____________________________________________________________
consensus             ATTAGTAGGCGGTCGCCCTCCCTAGCTAGAATTGGAGGTCCCGGATATTTGCCATTGACC
 
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JMSF049D09+           GTAACAATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTAAACTCG
JMFF040N15+           GTAACAATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTAAACTCG
JMSF018I23+           GTAACCATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTGAACTCA
                      ____________________________________________________________
consensus             GTAACAATGCTCTTTGTGTGGCACAGTCGAGTCACATTTTGCATGGTGACATTAAACTCG
 
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JMSF049D09+           TAGTGCCTAGTTAAGGCTTGTGCAGGTTGAGGAAGGAGAAACAAAGCTAGAAGTGGAAGT
JMFF040N15+           TAGTGCCTAGTTAAGGCTTGTGCAGGTTGAGGAAGGAGAAACAAAGCTAGAAGTGGAAGT
JMSF018I23+           TAGTGCCTAGTTTCGGCTTGTGCATGTTGAGGAAGGAGACACAAAGCTAGAAGTGGAAGT
                      ____________________________________________________________
consensus             TAGTGCCTAGTTAAGGCTTGTGCAGGTTGAGGAAGGAGAAACAAAGCTAGAAGTGGAAGT
 
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JMSF049D09+           ATGATTGCCATTGAAAACATTTGTGGAAGATATGTTGCAGCCATGACGAT          
JMFF040N15+           ATGATTGCCATTGAAAACATTTGTGGAAGATATGTTGCAGCCATGACGAT          
JMSF018I23+           ATGATTGCCATTGAAAATATTTGTGAAAAATATGTTGCAGCCATTACGATATAATAATGT
                      ____________________________________________________________
consensus             ATGATTGCCATTGAAAACATTTGTGGAAGATATGTTGCAGCCATGACGATATAATAATGT
 
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JMSF018I23+           GTAGTTGGAGAAGATCAGAGTGCTTATAATTAATTATATATGTTGAGAGATTGTTGAATC
                      ____________________________________________________________
consensus             GTAGTTGGAGAAGATCAGAGTGCTTATAATTAATTATATATGTTGAGAGATTGTTGAATC